RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 PPATQ06203 517 aa21.96■■□□□ 1.11
SPNS1-206ENST00000564476 FMR1Q06787 632 aaKnown RBP eCLIP21.96■■□□□ 1.11
SPNS1-206ENST00000564476 TROAPQ12815 778 aa21.96■■□□□ 1.11
SPNS1-206ENST00000564476 GMCL1P1Q8NEA9 526 aa21.96■■□□□ 1.11
SPNS1-206ENST00000564476 SLC10A4Q96EP9 437 aa21.96■■□□□ 1.11
SPNS1-206ENST00000564476 OTOFQ9HC10 1997 aa21.96■■□□□ 1.11
SPNS1-206ENST00000564476 CCDC196A0A1B0GTZ2 297 aa21.95■■□□□ 1.1
SPNS1-206ENST00000564476 TMEM88BA6NKF7 163 aa21.95■■□□□ 1.1
SPNS1-206ENST00000564476 C19orf81C9J6K1 198 aa21.95■■□□□ 1.1
SPNS1-206ENST00000564476 DHX16O60231 1041 aaKnown RBP21.95■■□□□ 1.1
SPNS1-206ENST00000564476 USP14P54578 494 aa21.95■■□□□ 1.1
SPNS1-206ENST00000564476 ATP2B2Q01814 1243 aa21.95■■□□□ 1.1
SPNS1-206ENST00000564476 SHROOM1Q2M3G4 852 aaPredicted RBP21.95■■□□□ 1.1
SPNS1-206ENST00000564476 ZNF280CQ8ND82 737 aa21.95■■□□□ 1.1
SPNS1-206ENST00000564476 KIAA1683Q9H0B3 1180 aa21.95■■□□□ 1.1
SPNS1-206ENST00000564476 SLKQ9H2G2 1235 aaPredicted RBP21.95■■□□□ 1.1
SPNS1-206ENST00000564476 SENP2Q9HC62 589 aa21.95■■□□□ 1.1
SPNS1-206ENST00000564476 GOPCQ9HD26 462 aa21.95■■□□□ 1.1
SPNS1-206ENST00000564476 ZHX2Q9Y6X8 837 aa21.95■■□□□ 1.1
SPNS1-206ENST00000564476 SPDYE5A6NIY4 337 aa21.94■■□□□ 1.1
SPNS1-206ENST00000564476 USP17L10C9JJH3 530 aa21.94■■□□□ 1.1
SPNS1-206ENST00000564476 PFKFB2O60825 505 aa21.94■■□□□ 1.1
SPNS1-206ENST00000564476 MOB2Q70IA6 237 aa21.94■■□□□ 1.1
SPNS1-206ENST00000564476 FANCBQ8NB91 859 aa21.94■■□□□ 1.1
SPNS1-206ENST00000564476 TMX3Q96JJ7 454 aa21.94■■□□□ 1.1
SPNS1-206ENST00000564476 AFG3L2Q9Y4W6 797 aa21.94■■□□□ 1.1
SPNS1-206ENST00000564476 PHIPQ8WWQ0 1821 aa21.94■■□□□ 1.1
SPNS1-206ENST00000564476 A0A1W2PRG0 241 aa21.93■■□□□ 1.1
SPNS1-206ENST00000564476 GOLGA8BA8MQT2 603 aa21.93■■□□□ 1.1
SPNS1-206ENST00000564476 F5H6K3 240 aa21.93■■□□□ 1.1
SPNS1-206ENST00000564476 CXCL11O14625 94 aa21.93■■□□□ 1.1
SPNS1-206ENST00000564476 PCNTO95613 3336 aa21.93■■□□□ 1.1
SPNS1-206ENST00000564476 KIF5BP33176 963 aa21.93■■□□□ 1.1
SPNS1-206ENST00000564476 KLRC3Q07444 240 aa21.93■■□□□ 1.1
SPNS1-206ENST00000564476 NID2Q14112 1375 aa21.93■■□□□ 1.1
SPNS1-206ENST00000564476 ME3Q16798 604 aa21.93■■□□□ 1.1
SPNS1-206ENST00000564476 CTCFLQ8NI51 663 aaPredicted RBP21.93■■□□□ 1.1
SPNS1-206ENST00000564476 LPAR1Q92633 364 aa21.93■■□□□ 1.1
SPNS1-206ENST00000564476 RBM28Q9NW13 759 aaKnown RBP21.93■■□□□ 1.1
SPNS1-206ENST00000564476 SNHG28P0DPA3 235 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 GNAQP50148 359 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 METAP2P50579 478 aaKnown RBP eCLIP21.92■■□□□ 1.1
SPNS1-206ENST00000564476 BACE1P56817 501 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 SPP2Q13103 211 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 CLEC10AQ8IUN9 316 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 ACER1Q8TDN7 264 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 DCAF4Q8WV16 495 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 GMCL1Q96IK5 515 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 FEZ1Q99689 392 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 LZTS2Q9BRK4 669 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 VCPKMTQ9H867 229 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 NAP1L2Q9ULW6 460 aaPredicted RBP21.92■■□□□ 1.1
SPNS1-206ENST00000564476 HPS5Q9UPZ3 1129 aa21.92■■□□□ 1.1
SPNS1-206ENST00000564476 PPIL2Q13356 520 aa21.91■■□□□ 1.1
SPNS1-206ENST00000564476 GPATCH4Q5T3I0 446 aaKnown RBP21.91■■□□□ 1.1
SPNS1-206ENST00000564476 SLFN13Q68D06 897 aa21.91■■□□□ 1.1
SPNS1-206ENST00000564476 CPLX2Q6PUV4 134 aaKnown RBP21.91■■□□□ 1.1
SPNS1-206ENST00000564476 USP17L2Q6R6M4 530 aa21.91■■□□□ 1.1
SPNS1-206ENST00000564476 NOL8Q76FK4 1167 aaKnown RBP21.91■■□□□ 1.1
SPNS1-206ENST00000564476 LRRC47Q8N1G4 583 aaKnown RBP21.91■■□□□ 1.1
SPNS1-206ENST00000564476 NUP133Q8WUM0 1156 aa21.91■■□□□ 1.1
SPNS1-206ENST00000564476 HHIPL1Q96JK4 782 aa21.91■■□□□ 1.1
SPNS1-206ENST00000564476 CLMNQ96JQ2 1002 aa21.91■■□□□ 1.1
SPNS1-206ENST00000564476 LARP6Q9BRS8 491 aaKnown RBP21.91■■□□□ 1.1
SPNS1-206ENST00000564476 ELP3Q9H9T3 547 aa21.91■■□□□ 1.1
SPNS1-206ENST00000564476 GOLGA8AA7E2F4 631 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 PDHBP11177 359 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 SMARCA1P28370 1054 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 ECE1P42892 770 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 CUL4AQ13619 759 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 GRM4Q14833 912 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 RTN1Q16799 776 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 ASPRV1Q53RT3 343 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 SH3D19Q5HYK7 790 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 MICU3Q86XE3 530 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 GTF3C6Q969F1 213 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 KCNH4Q9UQ05 1017 aa21.9■■□□□ 1.1
SPNS1-206ENST00000564476 PARP1P09874 1014 aaKnown RBP21.89■■□□□ 1.09
SPNS1-206ENST00000564476 HSPA1AP0DMV8 641 aaKnown RBP21.89■■□□□ 1.09
SPNS1-206ENST00000564476 HSPA1BP0DMV9 641 aaKnown RBP21.89■■□□□ 1.09
SPNS1-206ENST00000564476 HUNKP57058 714 aa21.89■■□□□ 1.09
SPNS1-206ENST00000564476 SAPCD2Q86UD0 394 aa21.89■■□□□ 1.09
SPNS1-206ENST00000564476 OPTNQ96CV9 577 aa21.89■■□□□ 1.09
SPNS1-206ENST00000564476 INTS4Q96HW7 963 aaKnown RBP21.89■■□□□ 1.09
SPNS1-206ENST00000564476 C12orf42Q96LP6 360 aa21.89■■□□□ 1.09
SPNS1-206ENST00000564476 LLPHQ9BRT6 129 aaKnown RBP21.89■■□□□ 1.09
SPNS1-206ENST00000564476 TLL2Q9Y6L7 1015 aa21.89■■□□□ 1.09
SPNS1-206ENST00000564476 PALM3A6NDB9 673 aaPredicted RBP21.88■■□□□ 1.09
SPNS1-206ENST00000564476 CPLX1O14810 134 aa21.88■■□□□ 1.09
SPNS1-206ENST00000564476 CDKL5O76039 1030 aa21.88■■□□□ 1.09
SPNS1-206ENST00000564476 LARGE1O95461 756 aa21.88■■□□□ 1.09
SPNS1-206ENST00000564476 NDUFB10O96000 172 aa21.88■■□□□ 1.09
SPNS1-206ENST00000564476 ZBTB48P10074 688 aaPredicted RBP21.88■■□□□ 1.09
SPNS1-206ENST00000564476 SLC1A4P43007 532 aa21.88■■□□□ 1.09
SPNS1-206ENST00000564476 SCRN1Q12765 414 aa21.88■■□□□ 1.09
SPNS1-206ENST00000564476 TMOD4Q9NZQ9 345 aa21.88■■□□□ 1.09
SPNS1-206ENST00000564476 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.88■■□□□ 1.09
SPNS1-206ENST00000564476 DAXXQ9UER7 740 aaPredicted RBP21.88■■□□□ 1.09
SPNS1-206ENST00000564476 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.88■■□□□ 1.09
SPNS1-206ENST00000564476 TRIM75PA6NK02 468 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms