RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 CLUHP3Q96NS8 147 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 MRPL18Q9H0U6 180 aaKnown RBP3.64□□□□□ -1.83
CHD9-209ENST00000564255 KLHL42Q9P2K6 505 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 ZNF451Q9Y4E5 1061 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 ACTL7BQ9Y614 415 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 SHOXO15266 292 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 ITGAVP06756 1048 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 PDGFRBP09619 1106 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 AMPD1P23109 780 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 STAT3P40763 770 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 C21orf62-AS1Q17RA5 79 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 TRIM61Q5EBN2 209 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 NBPF12Q5TAG4 269 aaPredicted RBP3.63□□□□□ -1.83
CHD9-209ENST00000564255 ZNF385CQ66K41 422 aaPredicted RBP3.63□□□□□ -1.83
CHD9-209ENST00000564255 TMEM130Q8N3G9 435 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 APEX2Q9UBZ4 518 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 AP4E1Q9UPM8 1137 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 EMC9Q9Y3B6 208 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 KRBA1A5PL33 1030 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 TP53P04637 393 aaPredicted RBP3.63□□□□□ -1.83
CHD9-209ENST00000564255 SUMO1P63165 101 aaKnown RBP3.63□□□□□ -1.83
CHD9-209ENST00000564255 RNF4P78317 190 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 IGF2-ASQ6U949 168 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 Q6ZS46 218 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 RNF180Q86T96 592 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 CCDC144CPQ8IYA2 1237 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 C7orf61Q8IZ16 206 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 OSBP2Q969R2 916 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 DPH2Q9BQC3 489 aaPredicted RBP3.63□□□□□ -1.83
CHD9-209ENST00000564255 IRF2BPLQ9H1B7 796 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 STK17AQ9UEE5 414 aa3.63□□□□□ -1.83
CHD9-209ENST00000564255 A0A087WZG4 1122 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.62□□□□□ -1.83
CHD9-209ENST00000564255 SPDYE3A6NKU9 549 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 GSG1L2A8MUP6 293 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 F8W735 103 aaPredicted RBP3.62□□□□□ -1.83
CHD9-209ENST00000564255 ASPAP45381 313 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 PPP2R2AP63151 447 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 ANKRD34AQ69YU3 496 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 DYMQ7RTS9 669 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 CHAC2Q8WUX2 184 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 ZNF775Q96BV0 537 aaPredicted RBP3.62□□□□□ -1.83
CHD9-209ENST00000564255 RCC1LQ96I51 464 aaKnown RBP3.62□□□□□ -1.83
CHD9-209ENST00000564255 FBXL18Q96ME1 805 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 KREMEN1Q96MU8 473 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 FAM126AQ9BYI3 521 aaPredicted RBP3.62□□□□□ -1.83
CHD9-209ENST00000564255 GBP3Q9H0R5 595 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 CAAP1Q9H8G2 361 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 FAM105AQ9NUU6 356 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 PRR13Q9NZ81 148 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 RNGTTO60942 597 aaKnown RBP3.62□□□□□ -1.83
CHD9-209ENST00000564255 CDKN1CP49918 316 aaPredicted RBP3.62□□□□□ -1.83
CHD9-209ENST00000564255 YOD1Q5VVQ6 348 aaPredicted RBP3.62□□□□□ -1.83
CHD9-209ENST00000564255 TRIM59Q8IWR1 403 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 SMYD4Q8IYR2 804 aaPredicted RBP3.62□□□□□ -1.83
CHD9-209ENST00000564255 BVESQ8NE79 360 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 ACSS3Q9H6R3 686 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 PIDD1Q9HB75 910 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 INTS7Q9NVH2 962 aaKnown RBP3.62□□□□□ -1.83
CHD9-209ENST00000564255 WHRNQ9P202 907 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 MAPRE3Q9UPY8 281 aa3.62□□□□□ -1.83
CHD9-209ENST00000564255 PRODHO43272 600 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 ARHGEF15O94989 841 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 C6orf222P0C671 652 aaPredicted RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 PABPC1P11940 636 aaKnown RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 CD247P20963 164 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 GMPRP36959 345 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 MAP7Q14244 749 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 DCAF15Q66K64 600 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 ARMCX6Q7L4S7 300 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 ARHGEF39Q8N4T4 335 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 PRPF38AQ8NAV1 312 aaKnown RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 LRRN4CLQ8ND94 238 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 RNF141Q8WVD5 230 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 ZNF512BQ96KM6 892 aaPredicted RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 FGD4Q96M96 766 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 ASPNQ9BXN1 380 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 CWC22Q9HCG8 908 aaKnown RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 IRS4O14654 1257 aaPredicted RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 RAPGEF3O95398 923 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 PARNO95453 639 aaKnown RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 MYCLP1P12525 358 aaPredicted RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 DRD2P14416 443 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 ELNP15502 786 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 SDSP20132 328 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 JAMLQ86YT9 394 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.61□□□□□ -1.83
CHD9-209ENST00000564255 GSTCDQ8NEC7 633 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 DDX1Q92499 740 aaKnown RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 EZH1Q92800 747 aaPredicted RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 PSMG3-AS1Q96PY0 264 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 CDC6Q99741 560 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 PLVAPQ9BX97 442 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 GP6Q9HCN6 339 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 MAGEC2Q9UBF1 373 aaPredicted RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 FAM83GA6ND36 823 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 TBX1O43435 398 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 PPM1BO75688 479 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 DNAJC8O75937 253 aaPredicted RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 WFS1O76024 890 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms