RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 STK36Q9NRP7 1315 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 PIP4K2BP78356 416 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 IQCA1Q86XH1 822 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 DZIP3Q86Y13 1208 aaKnown RBP13.34□□□□□ -0.27
ABCA3-203ENST00000563623 IQUBQ8NA54 791 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 DRC1Q96MC2 740 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 MAGEC2Q9UBF1 373 aaPredicted RBP13.34□□□□□ -0.27
ABCA3-203ENST00000563623 MYH15Q9Y2K3 1946 aa13.33□□□□□ -0.27
ABCA3-203ENST00000563623 GYPCP04921 128 aa13.33□□□□□ -0.27
ABCA3-203ENST00000563623 SARSP49591 514 aaKnown RBP13.33□□□□□ -0.27
ABCA3-203ENST00000563623 CYP26C1Q6V0L0 522 aa13.33□□□□□ -0.27
ABCA3-203ENST00000563623 EP400NLQ6ZTU2 488 aa13.33□□□□□ -0.27
ABCA3-203ENST00000563623 NOA1Q8NC60 698 aaKnown RBP13.33□□□□□ -0.27
ABCA3-203ENST00000563623 BANK1Q8NDB2 785 aa13.33□□□□□ -0.27
ABCA3-203ENST00000563623 EXOC4Q96A65 974 aa13.33□□□□□ -0.27
ABCA3-203ENST00000563623 ANKZF1Q9H8Y5 726 aa13.33□□□□□ -0.27
ABCA3-203ENST00000563623 MYO6Q9UM54 1294 aa13.33□□□□□ -0.27
ABCA3-203ENST00000563623 ZBTB1Q9Y2K1 713 aa13.33□□□□□ -0.27
ABCA3-203ENST00000563623 IGHMBP2P38935 993 aaKnown RBP13.33□□□□□ -0.28
ABCA3-203ENST00000563623 COPB1P53618 953 aaKnown RBP13.33□□□□□ -0.28
ABCA3-203ENST00000563623 PAK1Q13153 545 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 CASP8Q14790 479 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 CCDC122Q5T0U0 273 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
ABCA3-203ENST00000563623 CTCFLQ8NI51 663 aaPredicted RBP13.33□□□□□ -0.28
ABCA3-203ENST00000563623 HDAC6Q9UBN7 1215 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 KCNJ18B7U540 433 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 ACTN2P35609 894 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 MATR3P43243 847 aaKnown RBP eCLIP13.33□□□□□ -0.28
ABCA3-203ENST00000563623 KCNJ12Q14500 433 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 ZNF526Q8TF50 670 aaPredicted RBP13.33□□□□□ -0.28
ABCA3-203ENST00000563623 TRIM47Q96LD4 638 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 CHP1Q99653 195 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 FEZ2Q9UHY8 353 aaPredicted RBP13.33□□□□□ -0.28
ABCA3-203ENST00000563623 LCMT1Q9UIC8 334 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 GDAQ9Y2T3 454 aa13.33□□□□□ -0.28
ABCA3-203ENST00000563623 MAGEB6P1A0A0J9YX57 407 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 SRGAP2O75044 1071 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 GOLGA5Q8TBA6 731 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 MYO1CO00159 1063 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 STAT6P42226 847 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 CUL4BQ13620 913 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 BEND6Q5SZJ8 279 aaPredicted RBP13.32□□□□□ -0.28
ABCA3-203ENST00000563623 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
ABCA3-203ENST00000563623 PIGBQ92521 554 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 JADE2Q9NQC1 790 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 AATFQ9NY61 560 aaKnown RBP eCLIP13.32□□□□□ -0.28
ABCA3-203ENST00000563623 LUC7L2Q9Y383 392 aaKnown RBP13.32□□□□□ -0.28
ABCA3-203ENST00000563623 CRACR2AQ9BSW2 395 aa13.32□□□□□ -0.28
ABCA3-203ENST00000563623 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
ABCA3-203ENST00000563623 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
ABCA3-203ENST00000563623 TCRBV5S4A2TA0A5A2 114 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 TRIM49BA6NDI0 452 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 WNT7AO00755 349 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 GNAT2P19087 354 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 FAM47AQ5JRC9 791 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 RRP15Q9Y3B9 282 aaKnown RBP13.31□□□□□ -0.28
ABCA3-203ENST00000563623 EPN1Q9Y6I3 576 aaPredicted RBP13.31□□□□□ -0.28
ABCA3-203ENST00000563623 ARFGEF2Q9Y6D5 1785 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 MACROD2A1Z1Q3 448 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 ERVK-24P63145 666 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 SPAG1Q07617 926 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 DPYDQ12882 1025 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 TRIM28Q13263 835 aaKnown RBP13.31□□□□□ -0.28
ABCA3-203ENST00000563623 ALX1Q15699 326 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 FERMT2Q96AC1 680 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 ABHD10Q9NUJ1 306 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 GNL3LQ9NVN8 582 aaKnown RBP13.31□□□□□ -0.28
ABCA3-203ENST00000563623 KCNG1Q9UIX4 513 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 SLIT3O75094 1523 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 TRIM21P19474 475 aaKnown RBP13.31□□□□□ -0.28
ABCA3-203ENST00000563623 DYNLL1P63167 89 aaKnown RBP13.31□□□□□ -0.28
ABCA3-203ENST00000563623 CTR9Q6PD62 1173 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 RASGRP2Q7LDG7 609 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
ABCA3-203ENST00000563623 JAG2Q9Y219 1238 aa13.31□□□□□ -0.28
ABCA3-203ENST00000563623 WDR17Q8IZU2 1322 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 RTL9Q8NET4 1388 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 PPP1R3GB7ZBB8 358 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 RNF225M0QZC1 329 aaPredicted RBP13.3□□□□□ -0.28
ABCA3-203ENST00000563623 WHAMMP3Q1A5X7 153 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 GSPT2Q8IYD1 628 aaKnown RBP13.3□□□□□ -0.28
ABCA3-203ENST00000563623 STAG1Q8WVM7 1258 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 RNF26Q9BY78 433 aaPredicted RBP13.3□□□□□ -0.28
ABCA3-203ENST00000563623 FAM204AQ9H8W3 233 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 FER1L4A9Z1Z3 1794 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 ERCC3P19447 782 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 ARID4AP29374 1257 aaPredicted RBP13.3□□□□□ -0.28
ABCA3-203ENST00000563623 GYG1P46976 350 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 DNA2P51530 1060 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 MRPS25P82663 173 aaKnown RBP13.3□□□□□ -0.28
ABCA3-203ENST00000563623 RASGRP4Q8TDF6 673 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 TMEM94Q12767 1356 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 RIC1Q4ADV7 1423 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 NAP1L1P55209 391 aaKnown RBP13.3□□□□□ -0.28
ABCA3-203ENST00000563623 STIM1Q13586 685 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 NT5DC1Q5TFE4 455 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms