RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 GPATCH3Q96I76 525 aa30.42■■■□□ 2.46
NME3-202ENST00000561637 FRMPD3Q5JV73 1810 aa30.42■■■□□ 2.46
NME3-202ENST00000561637 KIAA1755Q5JYT7 1200 aa30.41■■■□□ 2.46
NME3-202ENST00000561637 ZSCAN25Q6NSZ9 544 aa30.41■■■□□ 2.46
NME3-202ENST00000561637 STRBPQ96SI9 672 aaKnown RBP30.41■■■□□ 2.46
NME3-202ENST00000561637 PORCNQ9H237 461 aa30.41■■■□□ 2.46
NME3-202ENST00000561637 CNMDO75829 334 aa30.4■■■□□ 2.46
NME3-202ENST00000561637 COL6A1P12109 1028 aa30.4■■■□□ 2.46
NME3-202ENST00000561637 CTR9Q6PD62 1173 aa30.4■■■□□ 2.46
NME3-202ENST00000561637 M0R2C6 588 aa30.39■■■□□ 2.46
NME3-202ENST00000561637 CDK8P49336 464 aa30.39■■■□□ 2.46
NME3-202ENST00000561637 CACNB2Q08289 660 aaPredicted RBP30.39■■■□□ 2.46
NME3-202ENST00000561637 SIAH1Q8IUQ4 282 aa30.39■■■□□ 2.46
NME3-202ENST00000561637 GPRC5AQ8NFJ5 357 aa30.39■■■□□ 2.46
NME3-202ENST00000561637 NUDT12Q9BQG2 462 aa30.39■■■□□ 2.46
NME3-202ENST00000561637 MYH8P13535 1937 aa30.39■■■□□ 2.46
NME3-202ENST00000561637 USP17L15C9J2P7 530 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 USP17L13C9JLJ4 530 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 USP17L11C9JVI0 530 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 USP17L18D6R9N7 530 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 USP17L22D6RA61 530 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 USP17L17D6RBQ6 530 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 USP17L19D6RCP7 530 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 USP17L20D6RJB6 530 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 RNF113AO15541 343 aaKnown RBP30.38■■■□□ 2.45
NME3-202ENST00000561637 XRCC5P13010 732 aaKnown RBP30.38■■■□□ 2.45
NME3-202ENST00000561637 ERVK-9P63128 1117 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 ERVK-24P63145 666 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 USP17L24Q0WX57 530 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 LRRC26Q2I0M4 334 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 CATSPERGQ6ZRH7 1159 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 RPAP3Q9H6T3 665 aaPredicted RBP30.38■■■□□ 2.45
NME3-202ENST00000561637 SWAP70Q9UH65 585 aa30.38■■■□□ 2.45
NME3-202ENST00000561637 GSG1L2A8MUP6 293 aa30.37■■■□□ 2.45
NME3-202ENST00000561637 CCND3P30281 292 aaPredicted RBP30.37■■■□□ 2.45
NME3-202ENST00000561637 USP14P54578 494 aa30.37■■■□□ 2.45
NME3-202ENST00000561637 MDM2Q00987 491 aaPredicted RBP30.37■■■□□ 2.45
NME3-202ENST00000561637 CCL14Q16627 93 aa30.37■■■□□ 2.45
NME3-202ENST00000561637 LHX8Q68G74 356 aa30.37■■■□□ 2.45
NME3-202ENST00000561637 C16orf86Q6ZW13 317 aa30.37■■■□□ 2.45
NME3-202ENST00000561637 STK11IPQ8N1F8 1099 aa30.37■■■□□ 2.45
NME3-202ENST00000561637 APPBP2Q92624 585 aa30.37■■■□□ 2.45
NME3-202ENST00000561637 COL25A1Q9BXS0 654 aaPredicted RBP30.37■■■□□ 2.45
NME3-202ENST00000561637 SALL3Q9BXA9 1300 aa30.37■■■□□ 2.45
NME3-202ENST00000561637 TMEM179Q6ZVK1 233 aa30.36■■■□□ 2.45
NME3-202ENST00000561637 USP6NLQ92738 828 aa30.36■■■□□ 2.45
NME3-202ENST00000561637 SEC62Q99442 399 aaKnown RBP30.36■■■□□ 2.45
NME3-202ENST00000561637 EPB41L4AQ9HCS5 686 aaPredicted RBP30.36■■■□□ 2.45
NME3-202ENST00000561637 SOCS4Q8WXH5 440 aa30.35■■■□□ 2.45
NME3-202ENST00000561637 TTC41PQ6P2S7 1318 aa30.35■■■□□ 2.45
NME3-202ENST00000561637 EYSQ5T1H1 3165 aa30.34■■■□□ 2.45
NME3-202ENST00000561637 SPDYE16A6NNV3 312 aaPredicted RBP30.34■■■□□ 2.45
NME3-202ENST00000561637 GPAA1O43292 621 aa30.34■■■□□ 2.45
NME3-202ENST00000561637 MX1P20591 662 aa30.34■■■□□ 2.45
NME3-202ENST00000561637 ANKRD45Q5TZF3 282 aa30.34■■■□□ 2.45
NME3-202ENST00000561637 BTBD7Q9P203 1132 aa30.34■■■□□ 2.45
NME3-202ENST00000561637 ZKSCAN1P17029 563 aaPredicted RBP30.33■■■□□ 2.45
NME3-202ENST00000561637 ICA1Q05084 483 aa30.32■■■□□ 2.44
NME3-202ENST00000561637 MORN1Q5T089 497 aa30.32■■■□□ 2.44
NME3-202ENST00000561637 SPICE1Q8N0Z3 855 aa30.32■■■□□ 2.44
NME3-202ENST00000561637 DDRGK1Q96HY6 314 aa30.32■■■□□ 2.44
NME3-202ENST00000561637 GUCD1Q96NT3 240 aa30.32■■■□□ 2.44
NME3-202ENST00000561637 POTEB2H3BUK9 544 aa30.31■■■□□ 2.44
NME3-202ENST00000561637 GLRX3O76003 335 aaKnown RBP30.31■■■□□ 2.44
NME3-202ENST00000561637 MAPK4P31152 587 aa30.31■■■□□ 2.44
NME3-202ENST00000561637 GPR142Q7Z601 462 aa30.31■■■□□ 2.44
NME3-202ENST00000561637 AMOTL1Q8IY63 956 aa30.31■■■□□ 2.44
NME3-202ENST00000561637 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.31■■■□□ 2.44
NME3-202ENST00000561637 RABGAP1Q9Y3P9 1069 aa30.31■■■□□ 2.44
NME3-202ENST00000561637 RLFQ13129 1914 aa30.31■■■□□ 2.44
NME3-202ENST00000561637 HDAC1Q13547 482 aaPredicted RBP30.3■■■□□ 2.44
NME3-202ENST00000561637 TRMT44Q8IYL2 757 aaKnown RBP30.3■■■□□ 2.44
NME3-202ENST00000561637 GTF3C2Q8WUA4 911 aaPredicted RBP30.3■■■□□ 2.44
NME3-202ENST00000561637 FSD1Q9BTV5 496 aa30.3■■■□□ 2.44
NME3-202ENST00000561637 ARPP21Q9UBL0 812 aaPredicted RBP30.3■■■□□ 2.44
NME3-202ENST00000561637 MINDY4BA8MYZ0 360 aa30.29■■■□□ 2.44
NME3-202ENST00000561637 ERC2O15083 957 aa30.29■■■□□ 2.44
NME3-202ENST00000561637 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.29■■■□□ 2.44
NME3-202ENST00000561637 TANGO6Q9C0B7 1094 aa30.29■■■□□ 2.44
NME3-202ENST00000561637 VCANP13611 3396 aa30.28■■■□□ 2.44
NME3-202ENST00000561637 ZFYP08048 801 aaPredicted RBP30.28■■■□□ 2.44
NME3-202ENST00000561637 EEF2P13639 858 aaKnown RBP30.28■■■□□ 2.44
NME3-202ENST00000561637 RGS2P41220 211 aa30.28■■■□□ 2.44
NME3-202ENST00000561637 ATP2B2Q01814 1243 aa30.28■■■□□ 2.44
NME3-202ENST00000561637 SBK1Q52WX2 424 aa30.28■■■□□ 2.44
NME3-202ENST00000561637 PLEKHH3Q7Z736 793 aa30.28■■■□□ 2.44
NME3-202ENST00000561637 CCDC17Q96LX7 622 aa30.28■■■□□ 2.44
NME3-202ENST00000561637 FAM161BQ96MY7 647 aa30.28■■■□□ 2.44
NME3-202ENST00000561637 TMX2Q9Y320 296 aa30.28■■■□□ 2.44
NME3-202ENST00000561637 RASA1P20936 1047 aa30.27■■■□□ 2.44
NME3-202ENST00000561637 LBX2Q6XYB7 198 aa30.27■■■□□ 2.44
NME3-202ENST00000561637 CCDC129Q6ZRS4 1044 aa30.27■■■□□ 2.44
NME3-202ENST00000561637 EXOC6Q8TAG9 804 aa30.27■■■□□ 2.44
NME3-202ENST00000561637 ZMYM1Q5SVZ6 1142 aa30.26■■■□□ 2.43
NME3-202ENST00000561637 WDR78Q5VTH9 848 aa30.26■■■□□ 2.43
NME3-202ENST00000561637 CCAR1Q8IX12 1150 aaKnown RBP30.26■■■□□ 2.43
NME3-202ENST00000561637 APBA2Q99767 749 aa30.26■■■□□ 2.43
NME3-202ENST00000561637 VCPKMTQ9H867 229 aa30.26■■■□□ 2.43
NME3-202ENST00000561637 ARHGEF10LQ9HCE6 1279 aa30.26■■■□□ 2.43
NME3-202ENST00000561637 GREB1LQ9C091 1923 aaPredicted RBP30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms