RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 RRP36Q96EU6 259 aaKnown RBP18.56■□□□□ 0.56
TPM1-228ENST00000560975 CEP89Q96ST8 783 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 NLRP2Q9NX02 1062 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 PSMD14O00487 310 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 KIAA1328Q86T90 577 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 NUP133Q8WUM0 1156 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 FOXP1Q9H334 677 aaPredicted RBP18.56■□□□□ 0.56
TPM1-228ENST00000560975 POLD4Q9HCU8 107 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 CEP131Q9UPN4 1083 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 IFNAR1P17181 557 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 HERVK_113P62684 666 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 PPFIA1Q13136 1202 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 SECISBP2LQ93073 1101 aaKnown RBP18.56■□□□□ 0.56
TPM1-228ENST00000560975 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.56■□□□□ 0.56
TPM1-228ENST00000560975 CXorf56Q9H5V9 222 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 SIPA1L3O60292 1781 aaPredicted RBP18.55■□□□□ 0.56
TPM1-228ENST00000560975 TTC26A0AVF1 554 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 KCNJ18B7U540 433 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 PHKG2P15735 406 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 MCAMP43121 646 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 KCNJ12Q14500 433 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 EZH2Q15910 746 aaKnown RBP18.55■□□□□ 0.56
TPM1-228ENST00000560975 ANKRD20A12PQ8NF67 263 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 AIDAQ96BJ3 306 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 JADE2Q9NQC1 790 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 VPS54Q9P1Q0 977 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 ECM29Q5VYK3 1845 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 hCG_1642624A0A1W2PR95 340 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 NBPF26B4DH59 902 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 SEMA3EO15041 775 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 CIAO1O76071 339 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 MAP2K2P36507 400 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 TTF1Q15361 905 aaPredicted RBP18.55■□□□□ 0.56
TPM1-228ENST00000560975 RTN1Q16799 776 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 NBPF10Q6P3W6 841 aaKnown RBP18.55■□□□□ 0.56
TPM1-228ENST00000560975 NBPF15Q8N660 670 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 HAUS4Q9H6D7 363 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 LIMA1Q9UHB6 759 aaKnown RBP18.55■□□□□ 0.56
TPM1-228ENST00000560975 CAPN7Q9Y6W3 813 aa18.55■□□□□ 0.56
TPM1-228ENST00000560975 STK36Q9NRP7 1315 aa18.54■□□□□ 0.56
TPM1-228ENST00000560975 ADD2P35612 726 aa18.54■□□□□ 0.56
TPM1-228ENST00000560975 SGMS1Q86VZ5 419 aa18.54■□□□□ 0.56
TPM1-228ENST00000560975 TARSL2A2RTX5 802 aaKnown RBP18.54■□□□□ 0.56
TPM1-228ENST00000560975 EIF3HO15372 352 aaKnown RBP eCLIP18.54■□□□□ 0.56
TPM1-228ENST00000560975 MATR3P43243 847 aaKnown RBP eCLIP18.54■□□□□ 0.56
TPM1-228ENST00000560975 ZC3H6P61129 1189 aaKnown RBP18.54■□□□□ 0.56
TPM1-228ENST00000560975 ANKRD18AQ8IVF6 992 aa18.54■□□□□ 0.56
TPM1-228ENST00000560975 HDAC7Q8WUI4 952 aa18.54■□□□□ 0.56
TPM1-228ENST00000560975 GSDMAQ96QA5 445 aa18.54■□□□□ 0.56
TPM1-228ENST00000560975 MST1RQ04912 1400 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 MACROD2A1Z1Q3 448 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 TRIM75PA6NK02 468 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 CKAP4Q07065 602 aaKnown RBP18.53■□□□□ 0.56
TPM1-228ENST00000560975 PPARAQ07869 468 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 TCP11X2Q5H9J9 407 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 EARS2Q5JPH6 523 aaKnown RBP18.53■□□□□ 0.56
TPM1-228ENST00000560975 DUSP10Q9Y6W6 482 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 USP54Q70EL1 1684 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 GRIN2DO15399 1336 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 ZNF532Q9HCE3 1301 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 H0YHG0 523 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 WNT7AO00755 349 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 PAPD7Q5XG87 772 aaKnown RBP18.53■□□□□ 0.56
TPM1-228ENST00000560975 SH3RF1Q7Z6J0 888 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 NELFBQ8WX92 580 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 LACRTQ9GZZ8 138 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 PIH1D3Q9NQM4 214 aaKnown RBP18.53■□□□□ 0.56
TPM1-228ENST00000560975 AATFQ9NY61 560 aaKnown RBP eCLIP18.53■□□□□ 0.56
TPM1-228ENST00000560975 TACC3Q9Y6A5 838 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 ARFGEF2Q9Y6D5 1785 aa18.53■□□□□ 0.56
TPM1-228ENST00000560975 RCCD1A6NED2 376 aa18.52■□□□□ 0.56
TPM1-228ENST00000560975 MYO1FO00160 1098 aa18.52■□□□□ 0.56
TPM1-228ENST00000560975 AEBP2Q6ZN18 517 aaPredicted RBP18.52■□□□□ 0.56
TPM1-228ENST00000560975 OR8K1Q8NGG5 319 aa18.52■□□□□ 0.56
TPM1-228ENST00000560975 DDX60Q8IY21 1712 aaKnown RBP18.52■□□□□ 0.56
TPM1-228ENST00000560975 IDEP14735 1019 aa18.52■□□□□ 0.56
TPM1-228ENST00000560975 SLC7A5Q01650 507 aa18.52■□□□□ 0.56
TPM1-228ENST00000560975 PDCLQ13371 301 aa18.52■□□□□ 0.56
TPM1-228ENST00000560975 ZNF174Q15697 407 aa18.52■□□□□ 0.56
TPM1-228ENST00000560975 CT47A1Q5JQC4 288 aaPredicted RBP18.52■□□□□ 0.56
TPM1-228ENST00000560975 LUC7L2Q9Y383 392 aaKnown RBP18.52■□□□□ 0.56
TPM1-228ENST00000560975 ZNF330Q9Y3S2 320 aaPredicted RBP18.52■□□□□ 0.56
TPM1-228ENST00000560975 PAK1Q13153 545 aa18.52■□□□□ 0.55
TPM1-228ENST00000560975 TSR1Q2NL82 804 aaKnown RBP18.52■□□□□ 0.55
TPM1-228ENST00000560975 ARL8AQ96BM9 186 aa18.52■□□□□ 0.55
TPM1-228ENST00000560975 ATP1A2P50993 1020 aa18.51■□□□□ 0.55
TPM1-228ENST00000560975 GSCP56915 257 aaPredicted RBP18.51■□□□□ 0.55
TPM1-228ENST00000560975 TRIM14Q14142 442 aa18.51■□□□□ 0.55
TPM1-228ENST00000560975 FAM184BQ9ULE4 1060 aa18.51■□□□□ 0.55
TPM1-228ENST00000560975 NDUFAB1O14561 156 aa18.51■□□□□ 0.55
TPM1-228ENST00000560975 PRDM1O75626 825 aa18.51■□□□□ 0.55
TPM1-228ENST00000560975 DEXIO95424 95 aa18.51■□□□□ 0.55
TPM1-228ENST00000560975 CHRM1P11229 460 aaPredicted RBP18.51■□□□□ 0.55
TPM1-228ENST00000560975 LIFRP42702 1097 aa18.51■□□□□ 0.55
TPM1-228ENST00000560975 CRACR2BQ8N4Y2 399 aaPredicted RBP18.51■□□□□ 0.55
TPM1-228ENST00000560975 DMGDHQ9UI17 866 aaKnown RBP18.51■□□□□ 0.55
TPM1-228ENST00000560975 GDAQ9Y2T3 454 aa18.51■□□□□ 0.55
TPM1-228ENST00000560975 WDR17Q8IZU2 1322 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 TRIM49BA6NDI0 452 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 TATP17735 454 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms