RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	WDR18	Q9BV38	432 aa		13.25	□□□□□ -0.29
CERS3-208	ENST00000560944	KANSL2	Q9H9L4	492 aa		13.25	□□□□□ -0.29
CERS3-208	ENST00000560944	KCNH4	Q9UQ05	1017 aa		13.25	□□□□□ -0.29
CERS3-208	ENST00000560944	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.24	□□□□□ -0.29
CERS3-208	ENST00000560944		A0A0G2JLL6	359 aa	Predicted RBP	13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	TTLL1	O95922	423 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	BACE1	P56817	501 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	PPAT	Q06203	517 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	WTAP	Q15007	396 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	SLC35G1	Q2M3R5	365 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	DEFB115	Q30KQ5	88 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	IFIT1B	Q5T764	474 aa	Known RBP	13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	GPAT2	Q6NUI2	795 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	CCDC144CP	Q8IYA2	1237 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	BRF1	Q92994	677 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	PTPN18	Q99952	460 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	UPF2	Q9HAU5	1272 aa	Known RBP	13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	PDRG1	Q9NUG6	133 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	TCP11L1	Q9NUJ3	509 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	FBXO28	Q9NVF7	368 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	NYAP2	Q9P242	653 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	CYP46A1	Q9Y6A2	500 aa		13.24	□□□□□ -0.29
CERS3-208	ENST00000560944	CCL15-CCL14	A0A0B4J2E2	113 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	GOLGA8H	P0CJ92	632 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	TOP1	P11387	765 aa	Known RBP	13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	VCAM1	P19320	739 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	NEK4	P51957	841 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	AK2	P54819	239 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	KIF23	Q02241	960 aa	Predicted RBP	13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	CCL15	Q16663	113 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	FAM83B	Q5T0W9	1011 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	TTBK2	Q6IQ55	1244 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	KCTD1	Q719H9	257 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	IQCA1	Q86XH1	822 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	TM6SF1	Q9BZW5	370 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	KIAA1683	Q9H0B3	1180 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	ARHGEF10L	Q9HCE6	1279 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	TAOK2	Q9UL54	1235 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	ISY1	Q9ULR0	285 aa	Known RBP	13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	TMX2	Q9Y320	296 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	RLF	Q13129	1914 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	PARP14	Q460N5	1801 aa		13.23	□□□□□ -0.29
CERS3-208	ENST00000560944	WDR33	Q9C0J8	1336 aa	Known RBP	13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	KLF18	A0A0U1RQI7	1052 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	BTBD19	C9JJ37	291 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	USP17L10	C9JJH3	530 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944		F5H6K3	240 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	PPFIA3	O75145	1194 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	PSMA5	P28066	241 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	SNAP25	P60880	206 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	KLRC3	Q07444	240 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	SNAPC2	Q13487	334 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	SLFN13	Q68D06	897 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	USP17L2	Q6R6M4	530 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	NFXL1	Q6ZNB6	911 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	MICU3	Q86XE3	530 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	ZNF654	Q8IZM8	581 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	FAM43A	Q8N2R8	423 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	STAG2	Q8N3U4	1231 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	PNMA1	Q8ND90	353 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	VCPKMT	Q9H867	229 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	KAT14	Q9H8E8	782 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	AS3MT	Q9HBK9	375 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	GPCPD1	Q9NPB8	672 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	GINM1	Q9NU53	330 aa		13.22	□□□□□ -0.29
CERS3-208	ENST00000560944	GOLGA8B	A8MQT2	603 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	CXCL11	O14625	94 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	ZBTB48	P10074	688 aa	Predicted RBP	13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	PDHB	P11177	359 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	ST3GAL1	Q11201	340 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	STK3	Q13188	491 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	CCDC96	Q2M329	555 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	POTEE	Q6S8J3	1075 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	CMTR1	Q8N1G2	835 aa	Known RBP	13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	NUP133	Q8WUM0	1156 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	ANKS1A	Q92625	1134 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	NCOA5	Q9HCD5	579 aa	Known RBP	13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	TPCN1	Q9ULQ1	816 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	HPS5	Q9UPZ3	1129 aa		13.21	□□□□□ -0.29
CERS3-208	ENST00000560944	WDR19	Q8NEZ3	1342 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	PLEKHA8P1	O95397	391 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	SLC16A2	P36021	539 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	FGD1	P98174	961 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	SH3D19	Q5HYK7	790 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	APOA5	Q6Q788	366 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	NBPF11	Q86T75	865 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	DGKH	Q86XP1	1220 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	NECAB1	Q8N987	351 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	GMCL1P1	Q8NEA9	526 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	MKL1	Q969V6	931 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	HHIPL1	Q96JK4	782 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	TMEM87B	Q96K49	555 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	R3HDML	Q9H3Y0	253 aa		13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.2	□□□□□ -0.3
CERS3-208	ENST00000560944	ZSWIM8	A7E2V4	1837 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms