RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 SLC45A1Q9Y2W3 748 aa18.32■□□□□ 0.52
LYSMD2-204ENST00000560491 CASP8AP2Q9UKL3 1982 aa18.31■□□□□ 0.52
LYSMD2-204ENST00000560491 ADGRA2Q96PE1 1338 aa18.31■□□□□ 0.52
LYSMD2-204ENST00000560491 PARP14Q460N5 1801 aa18.31■□□□□ 0.52
LYSMD2-204ENST00000560491 RAD21O60216 631 aa18.31■□□□□ 0.52
LYSMD2-204ENST00000560491 PARK7Q99497 189 aaKnown RBP18.31■□□□□ 0.52
LYSMD2-204ENST00000560491 KRT23Q9C075 422 aa18.31■□□□□ 0.52
LYSMD2-204ENST00000560491 RPAP3Q9H6T3 665 aaPredicted RBP18.31■□□□□ 0.52
LYSMD2-204ENST00000560491 CNNM2Q9H8M5 875 aa18.31■□□□□ 0.52
LYSMD2-204ENST00000560491 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.52
LYSMD2-204ENST00000560491 CYB5R4Q7L1T6 521 aa18.3■□□□□ 0.52
LYSMD2-204ENST00000560491 ASCC2Q9H1I8 757 aaPredicted RBP18.3■□□□□ 0.52
LYSMD2-204ENST00000560491 GOPCQ9HD26 462 aa18.3■□□□□ 0.52
LYSMD2-204ENST00000560491 TCP11L1Q9NUJ3 509 aa18.3■□□□□ 0.52
LYSMD2-204ENST00000560491 ZSWIM5Q9P217 1185 aa18.3■□□□□ 0.52
LYSMD2-204ENST00000560491 ZSWIM8A7E2V4 1837 aa18.3■□□□□ 0.52
LYSMD2-204ENST00000560491 RLFQ13129 1914 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 GPR25O00155 361 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 TLR2O60603 784 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 REC8O95072 547 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 OSBPP22059 807 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 HOXA7P31268 230 aaPredicted RBP18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 TRDNQ13061 729 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 LPAR1Q92633 364 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 MKL1Q969V6 931 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 CHMP4CQ96CF2 233 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 NUP88Q99567 741 aaPredicted RBP18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 CPA4Q9UI42 421 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 PNMA3Q9UL41 463 aa18.29■□□□□ 0.52
LYSMD2-204ENST00000560491 USP17L15C9J2P7 530 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 USP17L13C9JLJ4 530 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 USP17L11C9JVI0 530 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 USP17L18D6R9N7 530 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 USP17L22D6RA61 530 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 USP17L17D6RBQ6 530 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 USP17L19D6RCP7 530 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 USP17L20D6RJB6 530 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 F5H6K3 240 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 NDUFB10O96000 172 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 NOVP48745 357 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 IRX3P78415 501 aaPredicted RBP18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 KLRC3Q07444 240 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 USP17L24Q0WX57 530 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 RCSD1Q6JBY9 416 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 RALYLQ86SE5 291 aaKnown RBP18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 SMCR8Q8TEV9 937 aaPredicted RBP18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 TANGO6Q9C0B7 1094 aa18.28■□□□□ 0.52
LYSMD2-204ENST00000560491 WDR46O15213 610 aaKnown RBP18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 NT5C2P49902 561 aa18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 COL9A3Q14050 684 aaPredicted RBP18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 PPP4R3BQ5MIZ7 849 aa18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 FAM83BQ5T0W9 1011 aa18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 RNF20Q5VTR2 975 aa18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 CATSPERGQ6ZRH7 1159 aa18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 RASGRP2Q7LDG7 609 aa18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 CHST3Q7LGC8 479 aa18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 IQCA1Q86XH1 822 aa18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 RASEFQ8IZ41 740 aa18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 ZNF296Q8WUU4 475 aaPredicted RBP18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 ZSCAN10Q96SZ4 725 aaPredicted RBP18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 P2RX7Q99572 595 aaKnown RBP18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 TMEM47Q9BQJ4 181 aa18.27■□□□□ 0.52
LYSMD2-204ENST00000560491 A0A0G2JMZ2 1700 aa18.26■□□□□ 0.51
LYSMD2-204ENST00000560491 TNKSO95271 1327 aa18.26■□□□□ 0.51
LYSMD2-204ENST00000560491 HERVK_113P62684 666 aa18.26■□□□□ 0.51
LYSMD2-204ENST00000560491 SLFN13Q68D06 897 aa18.26■□□□□ 0.51
LYSMD2-204ENST00000560491 C17orf99Q6UX52 265 aa18.26■□□□□ 0.51
LYSMD2-204ENST00000560491 MB21D2Q8IYB1 491 aaPredicted RBP18.26■□□□□ 0.51
LYSMD2-204ENST00000560491 GMCL1P1Q8NEA9 526 aa18.26■□□□□ 0.51
LYSMD2-204ENST00000560491 SYNPO2Q9UMS6 1093 aa18.26■□□□□ 0.51
LYSMD2-204ENST00000560491 MTMR7Q9Y216 660 aa18.26■□□□□ 0.51
LYSMD2-204ENST00000560491 PEX10O60683 326 aa18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 FKTNO75072 461 aa18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 ECM2O94769 699 aaPredicted RBP18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 BCRP11274 1271 aa18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 HSPA4P34932 840 aa18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 ANTXR2P58335 489 aa18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 NOM1Q5C9Z4 860 aaKnown RBP18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 ENAHQ8N8S7 591 aaPredicted RBP18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 UBAC1Q9BSL1 405 aa18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 FBXO28Q9NVF7 368 aa18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 COL11A1P12107 1806 aaPredicted RBP18.25■□□□□ 0.51
LYSMD2-204ENST00000560491 MGAMO43451 1857 aa18.24■□□□□ 0.51
LYSMD2-204ENST00000560491 FLOT1O75955 427 aa18.24■□□□□ 0.51
LYSMD2-204ENST00000560491 SP3Q02447 781 aa18.24■□□□□ 0.51
LYSMD2-204ENST00000560491 ADCK5Q3MIX3 580 aa18.24■□□□□ 0.51
LYSMD2-204ENST00000560491 POTEEQ6S8J3 1075 aa18.24■□□□□ 0.51
LYSMD2-204ENST00000560491 ANKRD13CQ8N6S4 541 aa18.24■□□□□ 0.51
LYSMD2-204ENST00000560491 TTC14Q96N46 770 aa18.24■□□□□ 0.51
LYSMD2-204ENST00000560491 USP26Q9BXU7 913 aa18.24■□□□□ 0.51
LYSMD2-204ENST00000560491 PRDM10Q9NQV6 1147 aa18.24■□□□□ 0.51
LYSMD2-204ENST00000560491 SPDYE16A6NNV3 312 aaPredicted RBP18.23■□□□□ 0.51
LYSMD2-204ENST00000560491 MCCP23508 829 aa18.23■□□□□ 0.51
LYSMD2-204ENST00000560491 CAP1Q01518 475 aa18.23■□□□□ 0.51
LYSMD2-204ENST00000560491 SEC23AQ15436 765 aa18.23■□□□□ 0.51
LYSMD2-204ENST00000560491 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
LYSMD2-204ENST00000560491 DGKHQ86XP1 1220 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms