RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 DEFB115Q30KQ5 88 aa17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 CHST3Q7LGC8 479 aa17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 PRRT2Q7Z6L0 340 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 GMCL1P1Q8NEA9 526 aa17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 ZKSCAN3Q9BRR0 538 aa17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 AS3MTQ9HBK9 375 aa17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 GPHNQ9NQX3 736 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 CYP46A1Q9Y6A2 500 aa17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 RLFQ13129 1914 aa17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 NID2Q14112 1375 aa17.41■□□□□ 0.38
SNRPA1-207ENST00000559309 USP17L10C9JJH3 530 aa17.41■□□□□ 0.38
SNRPA1-207ENST00000559309 TOP1P11387 765 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-207ENST00000559309 KIAA1755Q5JYT7 1200 aa17.41■□□□□ 0.38
SNRPA1-207ENST00000559309 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-207ENST00000559309 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-207ENST00000559309 EMILIN3Q9NT22 766 aa17.41■□□□□ 0.38
SNRPA1-207ENST00000559309 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 IFIT3O14879 490 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 TROAPQ12815 778 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 SPP2Q13103 211 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 RABEP1Q15276 862 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 TMTC2Q8N394 836 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 CCDC102AQ96A19 550 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 OTUD5Q96G74 571 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 UBAC1Q9BSL1 405 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 VCPKMTQ9H867 229 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 ARHGEF10LQ9HCE6 1279 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 CLIP2Q9UDT6 1046 aa17.4■□□□□ 0.38
SNRPA1-207ENST00000559309 ZNF157P51786 506 aaPredicted RBP17.39■□□□□ 0.37
SNRPA1-207ENST00000559309 RCAN1P53805 252 aa17.39■□□□□ 0.37
SNRPA1-207ENST00000559309 TMEM67Q5HYA8 995 aa17.39■□□□□ 0.37
SNRPA1-207ENST00000559309 TCEANC2Q96MN5 208 aa17.39■□□□□ 0.37
SNRPA1-207ENST00000559309 MAP3K14Q99558 947 aa17.39■□□□□ 0.37
SNRPA1-207ENST00000559309 LRRC2Q9BYS8 371 aa17.39■□□□□ 0.37
SNRPA1-207ENST00000559309 SH2D4AQ9H788 454 aa17.39■□□□□ 0.37
SNRPA1-207ENST00000559309 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
SNRPA1-207ENST00000559309 WDR33Q9C0J8 1336 aaKnown RBP17.39■□□□□ 0.37
SNRPA1-207ENST00000559309 USP14P54578 494 aa17.38■□□□□ 0.37
SNRPA1-207ENST00000559309 MAP2K1Q02750 393 aaPredicted RBP17.38■□□□□ 0.37
SNRPA1-207ENST00000559309 WTAPQ15007 396 aa17.38■□□□□ 0.37
SNRPA1-207ENST00000559309 SART3Q15020 963 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-207ENST00000559309 Q6ZUG5 572 aa17.38■□□□□ 0.37
SNRPA1-207ENST00000559309 PROCA1Q8NCQ7 364 aaPredicted RBP17.38■□□□□ 0.37
SNRPA1-207ENST00000559309 LPAR1Q92633 364 aa17.38■□□□□ 0.37
SNRPA1-207ENST00000559309 GMCL1Q96IK5 515 aa17.38■□□□□ 0.37
SNRPA1-207ENST00000559309 BRPF3Q9ULD4 1205 aa17.38■□□□□ 0.37
SNRPA1-207ENST00000559309 ABT1Q9ULW3 272 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-207ENST00000559309 F5H6K3 240 aa17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 HSPA8P11142 646 aaKnown RBP17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 LBX1P52954 281 aa17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 KLRC3Q07444 240 aa17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 MTMR2Q13614 643 aa17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 IFIT1BQ5T764 474 aaKnown RBP17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 GPAT2Q6NUI2 795 aa17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 USP17L2Q6R6M4 530 aa17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 PNMA1Q8ND90 353 aa17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 PDRG1Q9NUG6 133 aa17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 A0A0G2JMZ2 1700 aa17.37■□□□□ 0.37
SNRPA1-207ENST00000559309 TRIM75PA6NK02 468 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 NDUFB10O96000 172 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 PDHBP11177 359 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 HOXA7P31268 230 aaPredicted RBP17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 NEK4P51957 841 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 GTF2A2P52657 109 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 AK2P54819 239 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 SNAPC2Q13487 334 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 DGKZQ13574 1117 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 CYP4F22Q6NT55 531 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 APOA5Q6Q788 366 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 LRRC47Q8N1G4 583 aaKnown RBP17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 BRI3BPQ8WY22 251 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 HPS5Q9UPZ3 1129 aa17.36■□□□□ 0.37
SNRPA1-207ENST00000559309 ERICH2A1L162 156 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 PLA2G6O60733 806 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 DDAH1O94760 285 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 VCAM1P19320 739 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 TM4SF4P48230 202 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 HMGCS2P54868 508 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 RASGRP2Q7LDG7 609 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 ZNF654Q8IZM8 581 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 BRF1Q92994 677 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 ZNF274Q96GC6 653 aaPredicted RBP17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 CAPNS2Q96L46 248 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 ZIC5Q96T25 663 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 PTPN18Q99952 460 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 KAT14Q9H8E8 782 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 SLC45A1Q9Y2W3 748 aa17.35■□□□□ 0.37
SNRPA1-207ENST00000559309 PALM3A6NDB9 673 aaPredicted RBP17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 MANSC4A6NHS7 340 aaPredicted RBP17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 WDR46O15213 610 aaKnown RBP17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 CD2BP2O95400 341 aaKnown RBP17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 CETPP11597 493 aa17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 INHBEP58166 350 aa17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 NOGQ13253 232 aa17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 BTNL9Q6UXG8 535 aa17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 DCAF4Q8WV16 495 aa17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 GOPCQ9HD26 462 aa17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 ZCCHC17Q9NP64 241 aaKnown RBP17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 FAM217BQ9NTX9 383 aaPredicted RBP17.34■□□□□ 0.37
SNRPA1-207ENST00000559309 PDIA3P30101 505 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms