RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 RANBP6O60518 1105 aaKnown RBP22.18■■□□□ 1.14
CASC4-209ENST00000559222 OSBPP22059 807 aa22.18■■□□□ 1.14
CASC4-209ENST00000559222 IRX3P78415 501 aaPredicted RBP22.18■■□□□ 1.14
CASC4-209ENST00000559222 AKNAD1Q5T1N1 836 aa22.18■■□□□ 1.14
CASC4-209ENST00000559222 OTOP1Q7RTM1 612 aa22.18■■□□□ 1.14
CASC4-209ENST00000559222 CTU1Q7Z7A3 348 aaKnown RBP22.18■■□□□ 1.14
CASC4-209ENST00000559222 ZNF287Q9HBT7 754 aa22.18■■□□□ 1.14
CASC4-209ENST00000559222 TXNRD2Q9NNW7 524 aa22.18■■□□□ 1.14
CASC4-209ENST00000559222 MTMR4Q9NYA4 1195 aa22.18■■□□□ 1.14
CASC4-209ENST00000559222 NYAP2Q9P242 653 aa22.18■■□□□ 1.14
CASC4-209ENST00000559222 CLIP2Q9UDT6 1046 aa22.18■■□□□ 1.14
CASC4-209ENST00000559222 PNMA3Q9UL41 463 aa22.18■■□□□ 1.14
CASC4-209ENST00000559222 TSPY2A6NKD2 308 aa22.17■■□□□ 1.14
CASC4-209ENST00000559222 ZNF213O14771 459 aa22.17■■□□□ 1.14
CASC4-209ENST00000559222 HERVK_113P62684 666 aa22.17■■□□□ 1.14
CASC4-209ENST00000559222 LACTBP83111 547 aaPredicted RBP22.17■■□□□ 1.14
CASC4-209ENST00000559222 PABPC4Q13310 644 aaKnown RBP eCLIP22.17■■□□□ 1.14
CASC4-209ENST00000559222 CATSPERGQ6ZRH7 1159 aa22.17■■□□□ 1.14
CASC4-209ENST00000559222 RASGRP2Q7LDG7 609 aa22.17■■□□□ 1.14
CASC4-209ENST00000559222 ERO1AQ96HE7 468 aa22.17■■□□□ 1.14
CASC4-209ENST00000559222 NUP88Q99567 741 aaPredicted RBP22.17■■□□□ 1.14
CASC4-209ENST00000559222 LSG1Q9H089 658 aaKnown RBP22.17■■□□□ 1.14
CASC4-209ENST00000559222 USP17L15C9J2P7 530 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 USP17L13C9JLJ4 530 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 USP17L11C9JVI0 530 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 USP17L18D6R9N7 530 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 USP17L22D6RA61 530 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 USP17L17D6RBQ6 530 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 USP17L19D6RCP7 530 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 USP17L20D6RJB6 530 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 USP17L24Q0WX57 530 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 CHMP4CQ96CF2 233 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 TRIM17Q9Y577 477 aa22.16■■□□□ 1.14
CASC4-209ENST00000559222 PLXNB2O15031 1838 aa22.15■■□□□ 1.14
CASC4-209ENST00000559222 DOCK3Q8IZD9 2030 aa22.15■■□□□ 1.14
CASC4-209ENST00000559222 RAD21O60216 631 aa22.15■■□□□ 1.14
CASC4-209ENST00000559222 CDC45O75419 566 aa22.15■■□□□ 1.14
CASC4-209ENST00000559222 CNMDO75829 334 aa22.15■■□□□ 1.14
CASC4-209ENST00000559222 MFSD6Q6ZSS7 791 aa22.15■■□□□ 1.14
CASC4-209ENST00000559222 TRIM47Q96LD4 638 aa22.15■■□□□ 1.14
CASC4-209ENST00000559222 TANGO6Q9C0B7 1094 aa22.15■■□□□ 1.14
CASC4-209ENST00000559222 SPDYE16A6NNV3 312 aaPredicted RBP22.14■■□□□ 1.13
CASC4-209ENST00000559222 B4E1Z4 1266 aa22.14■■□□□ 1.13
CASC4-209ENST00000559222 NDUFB10O96000 172 aa22.14■■□□□ 1.13
CASC4-209ENST00000559222 CYP21A2P08686 494 aa22.14■■□□□ 1.13
CASC4-209ENST00000559222 IMMTQ16891 758 aaKnown RBP22.14■■□□□ 1.13
CASC4-209ENST00000559222 FAM83BQ5T0W9 1011 aa22.14■■□□□ 1.13
CASC4-209ENST00000559222 SH2D4AQ9H788 454 aa22.14■■□□□ 1.13
CASC4-209ENST00000559222 FBXO28Q9NVF7 368 aa22.14■■□□□ 1.13
CASC4-209ENST00000559222 RBPJLQ9UBG7 517 aa22.14■■□□□ 1.13
CASC4-209ENST00000559222 RBM8AQ9Y5S9 174 aaKnown RBP22.14■■□□□ 1.13
CASC4-209ENST00000559222 TTLL1O95922 423 aa22.13■■□□□ 1.13
CASC4-209ENST00000559222 STOX1Q6ZVD7 989 aa22.13■■□□□ 1.13
CASC4-209ENST00000559222 MAP4K1Q92918 833 aa22.13■■□□□ 1.13
CASC4-209ENST00000559222 ZKSCAN3Q9BRR0 538 aa22.13■■□□□ 1.13
CASC4-209ENST00000559222 PAGR1Q9BTK6 254 aa22.13■■□□□ 1.13
CASC4-209ENST00000559222 CTNNA3Q9UI47 895 aa22.13■■□□□ 1.13
CASC4-209ENST00000559222 F5H6K3 240 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 SLC34A2O95436 690 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 PSMC4P43686 418 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 KLRC3Q07444 240 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 COL9A3Q14050 684 aaPredicted RBP22.12■■□□□ 1.13
CASC4-209ENST00000559222 FAM110CQ1W6H9 321 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 Q3C1V9 767 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 SAMD1Q6SPF0 538 aaPredicted RBP22.12■■□□□ 1.13
CASC4-209ENST00000559222 LPAR1Q92633 364 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 MKL1Q969V6 931 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 EFCC1Q9HA90 598 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 GOPCQ9HD26 462 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 BTBD7Q9P203 1132 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 MORF4L1Q9UBU8 362 aa22.12■■□□□ 1.13
CASC4-209ENST00000559222 U3KPZ7 1027 aaPredicted RBP22.12■■□□□ 1.13
CASC4-209ENST00000559222 WDR46O15213 610 aaKnown RBP22.11■■□□□ 1.13
CASC4-209ENST00000559222 KDM4AO75164 1064 aa22.11■■□□□ 1.13
CASC4-209ENST00000559222 GCLCP48506 637 aaPredicted RBP22.11■■□□□ 1.13
CASC4-209ENST00000559222 NOVP48745 357 aa22.11■■□□□ 1.13
CASC4-209ENST00000559222 RCSD1Q6JBY9 416 aa22.11■■□□□ 1.13
CASC4-209ENST00000559222 ATG4CQ96DT6 458 aa22.11■■□□□ 1.13
CASC4-209ENST00000559222 RNF41Q9H4P4 317 aaPredicted RBP22.11■■□□□ 1.13
CASC4-209ENST00000559222 ANO2Q9NQ90 1003 aa22.11■■□□□ 1.13
CASC4-209ENST00000559222 STX8Q9UNK0 236 aa22.11■■□□□ 1.13
CASC4-209ENST00000559222 HTTP42858 3142 aa22.11■■□□□ 1.13
CASC4-209ENST00000559222 ABHD8Q96I13 439 aa22.1■■□□□ 1.13
CASC4-209ENST00000559222 FLOT1O75955 427 aa22.09■■□□□ 1.13
CASC4-209ENST00000559222 CYB5R4Q7L1T6 521 aa22.09■■□□□ 1.13
CASC4-209ENST00000559222 PORCNQ9H237 461 aa22.09■■□□□ 1.13
CASC4-209ENST00000559222 GABRQQ9UN88 632 aa22.09■■□□□ 1.13
CASC4-209ENST00000559222 MTMR7Q9Y216 660 aa22.09■■□□□ 1.13
CASC4-209ENST00000559222 PTCH2Q9Y6C5 1203 aa22.09■■□□□ 1.13
CASC4-209ENST00000559222 FMNL1O95466 1100 aaPredicted RBP22.08■■□□□ 1.13
CASC4-209ENST00000559222 PCP11498 1178 aaKnown RBP22.08■■□□□ 1.13
CASC4-209ENST00000559222 DSG3P32926 999 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 ERVK-9P63128 1117 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 ERVK-24P63145 666 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 COG2Q14746 738 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 KIF22Q14807 665 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 SLFN13Q68D06 897 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 GMCL1P1Q8NEA9 526 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 ESR2Q92731 530 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 TMEM47Q9BQJ4 181 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms