RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ARMC9Q7Z3E5 817 aa21.11■□□□□ 0.97
CLPX-203ENST00000558958 CCDC144CPQ8IYA2 1237 aa21.11■□□□□ 0.97
CLPX-203ENST00000558958 INTS4Q96HW7 963 aaKnown RBP21.11■□□□□ 0.97
CLPX-203ENST00000558958 FAM217BQ9NTX9 383 aaPredicted RBP21.11■□□□□ 0.97
CLPX-203ENST00000558958 PAPPA2Q9BXP8 1791 aa21.1■□□□□ 0.97
CLPX-203ENST00000558958 PTPRAP18433 802 aa21.1■□□□□ 0.97
CLPX-203ENST00000558958 VGLL4Q14135 290 aa21.1■□□□□ 0.97
CLPX-203ENST00000558958 PPP2R5BQ15173 497 aa21.1■□□□□ 0.97
CLPX-203ENST00000558958 MOB2Q70IA6 237 aa21.1■□□□□ 0.97
CLPX-203ENST00000558958 CCDC84Q86UT8 332 aaPredicted RBP21.1■□□□□ 0.97
CLPX-203ENST00000558958 ACER1Q8TDN7 264 aa21.1■□□□□ 0.97
CLPX-203ENST00000558958 CHMP4CQ96CF2 233 aa21.1■□□□□ 0.97
CLPX-203ENST00000558958 ZNF408Q9H9D4 720 aa21.1■□□□□ 0.97
CLPX-203ENST00000558958 TMX2Q9Y320 296 aa21.1■□□□□ 0.97
CLPX-203ENST00000558958 SNCAIPQ9Y6H5 919 aa21.1■□□□□ 0.97
CLPX-203ENST00000558958 MYH4Q9Y623 1939 aa21.09■□□□□ 0.97
CLPX-203ENST00000558958 DHX16O60231 1041 aaKnown RBP21.09■□□□□ 0.97
CLPX-203ENST00000558958 HSP90AA1P07900 732 aaKnown RBP21.09■□□□□ 0.97
CLPX-203ENST00000558958 CDC27P30260 824 aa21.09■□□□□ 0.97
CLPX-203ENST00000558958 ADD1P35611 737 aaKnown RBP21.09■□□□□ 0.97
CLPX-203ENST00000558958 ECE1P42892 770 aa21.09■□□□□ 0.97
CLPX-203ENST00000558958 GRM4Q14833 912 aa21.09■□□□□ 0.97
CLPX-203ENST00000558958 RTN1Q16799 776 aa21.09■□□□□ 0.97
CLPX-203ENST00000558958 ANKRD13AQ8IZ07 590 aa21.09■□□□□ 0.97
CLPX-203ENST00000558958 GMCL1P1Q8NEA9 526 aa21.09■□□□□ 0.97
CLPX-203ENST00000558958 CSADQ9Y600 493 aa21.09■□□□□ 0.97
CLPX-203ENST00000558958 SNHG28P0DPA3 235 aa21.08■□□□□ 0.97
CLPX-203ENST00000558958 FKBP1BP68106 108 aa21.08■□□□□ 0.97
CLPX-203ENST00000558958 SPRYD3Q8NCJ5 442 aa21.08■□□□□ 0.97
CLPX-203ENST00000558958 CTCFLQ8NI51 663 aaPredicted RBP21.08■□□□□ 0.97
CLPX-203ENST00000558958 WDR18Q9BV38 432 aa21.08■□□□□ 0.97
CLPX-203ENST00000558958 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.08■□□□□ 0.97
CLPX-203ENST00000558958 CCDC196A0A1B0GTZ2 297 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 CELF2O95319 508 aaKnown RBP21.07■□□□□ 0.96
CLPX-203ENST00000558958 PDHBP11177 359 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 YY1P25490 414 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 KIF5BP33176 963 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 LDLRAD1Q5T700 205 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 LLPHQ9BRT6 129 aaKnown RBP21.07■□□□□ 0.96
CLPX-203ENST00000558958 SH2D4AQ9H788 454 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 FOXD4L1Q9NU39 408 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 RBM28Q9NW13 759 aaKnown RBP21.07■□□□□ 0.96
CLPX-203ENST00000558958 MTMR7Q9Y216 660 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 OTOFQ9HC10 1997 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 UNCXA6NJT0 531 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 F5H6K3 240 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 UBE2Q2LH0YL09 131 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 CTDNEP1O95476 244 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 KLRC3Q07444 240 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 RASGRP2Q7LDG7 609 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 AS3MTQ9HBK9 375 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 GBA2Q9HCG7 927 aaPredicted RBP21.07■□□□□ 0.96
CLPX-203ENST00000558958 MAD2L2Q9UI95 211 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 ZHX2Q9Y6X8 837 aa21.07■□□□□ 0.96
CLPX-203ENST00000558958 PALM3A6NDB9 673 aaPredicted RBP21.06■□□□□ 0.96
CLPX-203ENST00000558958 CPLX1O14810 134 aa21.06■□□□□ 0.96
CLPX-203ENST00000558958 NTRK3Q16288 839 aa21.06■□□□□ 0.96
CLPX-203ENST00000558958 CST9Q5W186 159 aa21.06■□□□□ 0.96
CLPX-203ENST00000558958 SLFN13Q68D06 897 aa21.06■□□□□ 0.96
CLPX-203ENST00000558958 ZNF280CQ8ND82 737 aa21.06■□□□□ 0.96
CLPX-203ENST00000558958 NSUN7Q8NE18 718 aaKnown RBP21.06■□□□□ 0.96
CLPX-203ENST00000558958 CLMNQ96JQ2 1002 aa21.06■□□□□ 0.96
CLPX-203ENST00000558958 KIAA1683Q9H0B3 1180 aa21.06■□□□□ 0.96
CLPX-203ENST00000558958 GOPCQ9HD26 462 aa21.06■□□□□ 0.96
CLPX-203ENST00000558958 NDUFB10O96000 172 aa21.05■□□□□ 0.96
CLPX-203ENST00000558958 PARP1P09874 1014 aaKnown RBP21.05■□□□□ 0.96
CLPX-203ENST00000558958 USP17L2Q6R6M4 530 aa21.05■□□□□ 0.96
CLPX-203ENST00000558958 TMTC3Q6ZXV5 915 aa21.05■□□□□ 0.96
CLPX-203ENST00000558958 STAG2Q8N3U4 1231 aa21.05■□□□□ 0.96
CLPX-203ENST00000558958 C2orf69Q8N8R5 385 aa21.05■□□□□ 0.96
CLPX-203ENST00000558958 SMC1BQ8NDV3 1235 aa21.05■□□□□ 0.96
CLPX-203ENST00000558958 DCAF4Q8WV16 495 aa21.05■□□□□ 0.96
CLPX-203ENST00000558958 GMCL1Q96IK5 515 aa21.05■□□□□ 0.96
CLPX-203ENST00000558958 FEZ1Q99689 392 aa21.05■□□□□ 0.96
CLPX-203ENST00000558958 VCPKMTQ9H867 229 aa21.05■□□□□ 0.96
CLPX-203ENST00000558958 USP17L10C9JJH3 530 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 DTNBO60941 627 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 CDKL5O76039 1030 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 PLEKHA8P1O95397 391 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 IFNAR1P17181 557 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 GNAQP50148 359 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 SPP2Q13103 211 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 ASPRV1Q53RT3 343 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 CPLX2Q6PUV4 134 aaKnown RBP21.04■□□□□ 0.96
CLPX-203ENST00000558958 ZNF784Q8NCA9 323 aaPredicted RBP21.04■□□□□ 0.96
CLPX-203ENST00000558958 SMARCC2Q8TAQ2 1214 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 ELP3Q9H9T3 547 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 SMC3Q9UQE7 1217 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 AFG3L2Q9Y4W6 797 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 PASKQ96RG2 1323 aa21.04■□□□□ 0.96
CLPX-203ENST00000558958 RAD21O60216 631 aa21.03■□□□□ 0.96
CLPX-203ENST00000558958 JAK2O60674 1132 aa21.03■□□□□ 0.96
CLPX-203ENST00000558958 GOLGA8HP0CJ92 632 aa21.03■□□□□ 0.96
CLPX-203ENST00000558958 SLC1A4P43007 532 aa21.03■□□□□ 0.96
CLPX-203ENST00000558958 ZNF543Q08ER8 600 aa21.03■□□□□ 0.96
CLPX-203ENST00000558958 FUT2Q10981 343 aa21.03■□□□□ 0.96
CLPX-203ENST00000558958 KIAA1755Q5JYT7 1200 aa21.03■□□□□ 0.96
CLPX-203ENST00000558958 GPATCH4Q5T3I0 446 aaKnown RBP21.03■□□□□ 0.96
CLPX-203ENST00000558958 RBM46Q8TBY0 533 aaKnown RBP21.03■□□□□ 0.96
CLPX-203ENST00000558958 PHIPQ8WWQ0 1821 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms