RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 SCN7AQ01118 1682 aa8.16□□□□□ -1.1
ZEB1-211ENST00000558440 DNM1Q05193 864 aaKnown RBP8.16□□□□□ -1.1
ZEB1-211ENST00000558440 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
ZEB1-211ENST00000558440 MORC1Q86VD1 984 aa8.16□□□□□ -1.1
ZEB1-211ENST00000558440 CEP120Q8N960 986 aa8.16□□□□□ -1.1
ZEB1-211ENST00000558440 MEGF10Q96KG7 1140 aa8.16□□□□□ -1.1
ZEB1-211ENST00000558440 SLC52A2Q9HAB3 445 aa8.16□□□□□ -1.1
ZEB1-211ENST00000558440 SLX4Q8IY92 1834 aa8.15□□□□□ -1.1
ZEB1-211ENST00000558440 MRC1P22897 1456 aa8.15□□□□□ -1.1
ZEB1-211ENST00000558440 CYP19A1P11511 503 aaPredicted RBP8.15□□□□□ -1.1
ZEB1-211ENST00000558440 FOXD4L6Q3SYB3 417 aaPredicted RBP8.15□□□□□ -1.1
ZEB1-211ENST00000558440 FOXD4L3Q6VB84 417 aaPredicted RBP8.15□□□□□ -1.1
ZEB1-211ENST00000558440 NCAPG2Q86XI2 1143 aa8.15□□□□□ -1.1
ZEB1-211ENST00000558440 TMEM130Q8N3G9 435 aa8.15□□□□□ -1.1
ZEB1-211ENST00000558440 PBX4Q9BYU1 374 aa8.15□□□□□ -1.1
ZEB1-211ENST00000558440 LACRTQ9GZZ8 138 aa8.15□□□□□ -1.1
ZEB1-211ENST00000558440 PANK3Q9H999 370 aa8.15□□□□□ -1.1
ZEB1-211ENST00000558440 CNTN3Q9P232 1028 aa8.15□□□□□ -1.1
ZEB1-211ENST00000558440 KANSL3Q9P2N6 904 aa8.15□□□□□ -1.1
ZEB1-211ENST00000558440 ZBTB1Q9Y2K1 713 aa8.15□□□□□ -1.1
ZEB1-211ENST00000558440 CARMIL3Q8ND23 1372 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 NFKBIEO00221 500 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 NPR3P17342 541 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 CDC27P30260 824 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 SLC39A6Q13433 755 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 MTMR3Q13615 1198 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 ALKBH2Q6NS38 261 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 PHLDB3Q6NSJ2 640 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 ADAMTSL4Q6UY14 1074 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 ZNF622Q969S3 477 aaKnown RBP eCLIP8.14□□□□□ -1.11
ZEB1-211ENST00000558440 KRTAP4-12Q9BQ66 201 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 AKTIPQ9H8T0 292 aa8.14□□□□□ -1.11
ZEB1-211ENST00000558440 SIPA1L3O60292 1781 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-211ENST00000558440 A0A087WZG4 1122 aa8.13□□□□□ -1.11
ZEB1-211ENST00000558440 F8W735 103 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-211ENST00000558440 LINC01387J3KSC0 135 aa8.13□□□□□ -1.11
ZEB1-211ENST00000558440 RNMTO43148 476 aaKnown RBP8.13□□□□□ -1.11
ZEB1-211ENST00000558440 CANXP27824 592 aaKnown RBP8.13□□□□□ -1.11
ZEB1-211ENST00000558440 PDE6BP35913 854 aa8.13□□□□□ -1.11
ZEB1-211ENST00000558440 C1orf127Q8N9H9 656 aa8.13□□□□□ -1.11
ZEB1-211ENST00000558440 LGR6Q9HBX8 967 aa8.13□□□□□ -1.11
ZEB1-211ENST00000558440 ZFP64Q9NPA5 681 aa8.13□□□□□ -1.11
ZEB1-211ENST00000558440 SALL4Q9UJQ4 1053 aa8.13□□□□□ -1.11
ZEB1-211ENST00000558440 MTMR7Q9Y216 660 aa8.13□□□□□ -1.11
ZEB1-211ENST00000558440 BCORQ6W2J9 1755 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 CARNS1A5YM72 827 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 A6NHS1 94 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 NPHP1O15259 732 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 ALX3O95076 343 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 STARD3NLO95772 234 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 CES1P23141 567 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 IL13P35225 146 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 C8orf34Q49A92 452 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 DZIP1LQ8IYY4 767 aaKnown RBP8.12□□□□□ -1.11
ZEB1-211ENST00000558440 TTC5Q8N0Z6 440 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 GALNT11Q8NCW6 608 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 TTC16Q8NEE8 873 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 BRIP1Q9BX63 1249 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 TAOK3Q9H2K8 898 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 POLIQ9UNA4 740 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 TIMELESSQ9UNS1 1208 aa8.12□□□□□ -1.11
ZEB1-211ENST00000558440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.12□□□□□ -1.11
ZEB1-211ENST00000558440 PTPRAP18433 802 aa8.11□□□□□ -1.11
ZEB1-211ENST00000558440 TXNDC11Q6PKC3 985 aa8.11□□□□□ -1.11
ZEB1-211ENST00000558440 Q6ZS46 218 aa8.11□□□□□ -1.11
ZEB1-211ENST00000558440 NPM2Q86SE8 214 aaKnown RBP8.11□□□□□ -1.11
ZEB1-211ENST00000558440 NBPF11Q86T75 865 aa8.11□□□□□ -1.11
ZEB1-211ENST00000558440 POP1Q99575 1024 aaKnown RBP8.11□□□□□ -1.11
ZEB1-211ENST00000558440 ADAM19Q9H013 955 aa8.11□□□□□ -1.11
ZEB1-211ENST00000558440 CHRDQ9H2X0 955 aa8.11□□□□□ -1.11
ZEB1-211ENST00000558440 KNSTRNQ9Y448 316 aa8.11□□□□□ -1.11
ZEB1-211ENST00000558440 CNTNAP1P78357 1384 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 LTBP3Q9NS15 1303 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 IQCA1LA6NCM1 817 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 TM4SF5O14894 197 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 FOXN1O15353 648 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 DDNO94850 711 aaPredicted RBP8.1□□□□□ -1.11
ZEB1-211ENST00000558440 FAM13AO94988 1023 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 HMOX1P09601 288 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 EPHA1P21709 976 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 CD68P34810 354 aaPredicted RBP8.1□□□□□ -1.11
ZEB1-211ENST00000558440 EIF5P55010 431 aaKnown RBP8.1□□□□□ -1.11
ZEB1-211ENST00000558440 ST5P78524 1137 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 ARTNQ5T4W7 220 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 SOGA3Q5TF21 947 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 TBC1D9BQ66K14 1250 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 PRR5LQ6MZQ0 368 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.1□□□□□ -1.11
ZEB1-211ENST00000558440 CNBD1Q8NA66 436 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 PMEPA1Q969W9 287 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 USTQ9Y2C2 406 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 TRPM7Q96QT4 1865 aa8.1□□□□□ -1.11
ZEB1-211ENST00000558440 ACPPP15309 386 aa8.09□□□□□ -1.11
ZEB1-211ENST00000558440 CTCFP49711 727 aaPredicted RBP8.09□□□□□ -1.11
ZEB1-211ENST00000558440 MTHFSDQ2M296 383 aaKnown RBP8.09□□□□□ -1.11
ZEB1-211ENST00000558440 STYK1Q6J9G0 422 aa8.09□□□□□ -1.11
ZEB1-211ENST00000558440 FAM117BQ6P1L5 589 aa8.09□□□□□ -1.11
ZEB1-211ENST00000558440 PRR23CQ6ZRP0 262 aa8.09□□□□□ -1.11
ZEB1-211ENST00000558440 LDHDQ86WU2 507 aa8.09□□□□□ -1.11
ZEB1-211ENST00000558440 AGGF1Q8N302 714 aaeCLIP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms