RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 HOXA7P31268 230 aaPredicted RBP16.57■□□□□ 0.24
SUPT16H-208ENST00000557652 KIF23Q02241 960 aaPredicted RBP16.57■□□□□ 0.24
SUPT16H-208ENST00000557652 SIAH1Q8IUQ4 282 aa16.57■□□□□ 0.24
SUPT16H-208ENST00000557652 DNAJC5GQ8N7S2 189 aa16.57■□□□□ 0.24
SUPT16H-208ENST00000557652 CLIP2Q9UDT6 1046 aa16.57■□□□□ 0.24
SUPT16H-208ENST00000557652 PNMA3Q9UL41 463 aa16.57■□□□□ 0.24
SUPT16H-208ENST00000557652 AGTPBP1Q9UPW5 1226 aa16.57■□□□□ 0.24
SUPT16H-208ENST00000557652 IFIT3O14879 490 aaKnown RBP16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 CA12O43570 354 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 PRC1O43663 620 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 SEC24BO95487 1268 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 HMGCS2P54868 508 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 WTAPQ15007 396 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 SEC23AQ15436 765 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 SHROOM1Q2M3G4 852 aaPredicted RBP16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 IFIT1BQ5T764 474 aaKnown RBP16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 ENAHQ8N8S7 591 aaPredicted RBP16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 ACER1Q8TDN7 264 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 GTF3C2Q8WUA4 911 aaPredicted RBP16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 GMCL1Q96IK5 515 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 JAKMIP1Q96N16 626 aaKnown RBP16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 CFHR5Q9BXR6 569 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 C22orf23Q9BZE7 217 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 ZSWIM6Q9HCJ5 1215 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 CYP46A1Q9Y6A2 500 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 TAF6LQ9Y6J9 622 aa16.56■□□□□ 0.24
SUPT16H-208ENST00000557652 MYPNQ86TC9 1320 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 A0A1W2PRG0 241 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 RCAN1P53805 252 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 ATP2B2Q01814 1243 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 RUFY3Q7L099 469 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 CYB5R4Q7L1T6 521 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 SGMS1Q86VZ5 419 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 BRI3BPQ8WY22 251 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 MAP3K14Q99558 947 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 TMEM47Q9BQJ4 181 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 KAT14Q9H8E8 782 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 EMILIN3Q9NT22 766 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 SAGE1Q9NXZ1 904 aa16.55■□□□□ 0.24
SUPT16H-208ENST00000557652 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 F5H6K3 240 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 PLA2G6O60733 806 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 CASTP20810 708 aaKnown RBP16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 RPS6KB1P23443 525 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 ANTXR2P58335 489 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 HTRA3P83110 453 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 KLRC3Q07444 240 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 MOGSQ13724 837 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 ADCK5Q3MIX3 580 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 TMEM67Q5HYA8 995 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 CCDC84Q86UT8 332 aaPredicted RBP16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 AGXT2Q9BYV1 514 aa16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 ALDH8A1Q9H2A2 487 aaPredicted RBP16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.54■□□□□ 0.24
SUPT16H-208ENST00000557652 MYH6P13533 1939 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 RLFQ13129 1914 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 SH2B2O14492 632 aaPredicted RBP16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 NMT2O60551 498 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 CALM1P0DP23 149 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 CALM2P0DP24 149 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 CALM3P0DP25 149 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 FDX1P10109 184 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 VCAM1P19320 739 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 OSBPP22059 807 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 GRM1Q13255 1194 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 PPP2R5BQ15173 497 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 GPATCH4Q5T3I0 446 aaKnown RBP16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 GADL1Q6ZQY3 521 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 JMYQ8N9B5 988 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 PNMA1Q8ND90 353 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 PARK7Q99497 189 aaKnown RBP16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 BEGAINQ9BUH8 593 aa16.53■□□□□ 0.24
SUPT16H-208ENST00000557652 BTBD19C9JJ37 291 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 AOC2O75106 756 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 DDAH1O94760 285 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 NDUFB10O96000 172 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 SNHG28P0DPA3 235 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 FGD1P98174 961 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 MKRN3Q13064 507 aaKnown RBP16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 ANKRD1Q15327 319 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 NOM1Q5C9Z4 860 aaKnown RBP16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 SLFN13Q68D06 897 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 GPAT2Q6NUI2 795 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 LBX2Q6XYB7 198 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 CATIPQ7Z7H3 387 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 CLEC10AQ8IUN9 316 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 TBC1D32Q96NH3 1257 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 ZKSCAN3Q9BRR0 538 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms