RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SDSP20132 328 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 PSEN2P49810 448 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 LSM11P83369 360 aaKnown RBP eCLIP9.92□□□□□ -0.82
PSEN1-223ENST00000557511 PDE4BQ07343 736 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 CRHR2Q13324 411 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 SBK1Q52WX2 424 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 COL13A1Q5TAT6 717 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-223ENST00000557511 C12orf60Q5U649 245 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 TATDN1Q6P1N9 297 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 CTR9Q6PD62 1173 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 TMEM179Q6ZVK1 233 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 PRRT2Q7Z6L0 340 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-223ENST00000557511 IFNL3Q8IZI9 196 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 ZNF444Q8N0Y2 327 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-223ENST00000557511 FAM43AQ8N2R8 423 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 PROCA1Q8NCQ7 364 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-223ENST00000557511 SMCR8Q8TEV9 937 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-223ENST00000557511 ZNF296Q8WUU4 475 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-223ENST00000557511 PTPN18Q99952 460 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 WDR18Q9BV38 432 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 ADAM33Q9BZ11 813 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 DNAJC18Q9H819 358 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 ARHGEF10LQ9HCE6 1279 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 GSG1L2A8MUP6 293 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 CYP2D6P10635 497 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 SHMT1P34896 483 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 CDK8P49336 464 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 HMGCS2P54868 508 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 BACE1P56817 501 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 IRX3P78415 501 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-223ENST00000557511 SP3Q02447 781 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 GABPAQ06546 454 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 DGKZQ13574 1117 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 MTMR2Q13614 643 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 TTC22Q5TAA0 569 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 USP17L2Q6R6M4 530 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 C16orf86Q6ZW13 317 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 CTU1Q7Z7A3 348 aaKnown RBP9.91□□□□□ -0.82
PSEN1-223ENST00000557511 CCDC84Q86UT8 332 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-223ENST00000557511 DYNLL2Q96FJ2 89 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 SEC62Q99442 399 aaKnown RBP9.91□□□□□ -0.82
PSEN1-223ENST00000557511 PLSCR2Q9NRY7 297 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 AGTPBP1Q9UPW5 1226 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 SLC45A1Q9Y2W3 748 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 OTOFQ9HC10 1997 aa9.91□□□□□ -0.82
PSEN1-223ENST00000557511 MYO5AQ9Y4I1 1855 aaKnown RBP9.91□□□□□ -0.82
PSEN1-223ENST00000557511 CCDC171Q6TFL3 1326 aa9.9□□□□□ -0.82
PSEN1-223ENST00000557511 TLR2O60603 784 aa9.9□□□□□ -0.82
PSEN1-223ENST00000557511 ATP2B2Q01814 1243 aa9.9□□□□□ -0.82
PSEN1-223ENST00000557511 NMIQ13287 307 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-223ENST00000557511 PKN2Q16513 984 aaKnown RBP9.9□□□□□ -0.82
PSEN1-223ENST00000557511 ERICH6BQ5W0A0 696 aa9.9□□□□□ -0.82
PSEN1-223ENST00000557511 POTEEQ6S8J3 1075 aa9.9□□□□□ -0.82
PSEN1-223ENST00000557511 CWC27Q6UX04 472 aaKnown RBP9.9□□□□□ -0.82
PSEN1-223ENST00000557511 CCDC129Q6ZRS4 1044 aa9.9□□□□□ -0.82
PSEN1-223ENST00000557511 STK11IPQ8N1F8 1099 aa9.9□□□□□ -0.82
PSEN1-223ENST00000557511 FAM227BQ96M60 508 aa9.9□□□□□ -0.82
PSEN1-223ENST00000557511 TOMM22Q9NS69 142 aa9.9□□□□□ -0.82
PSEN1-223ENST00000557511 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-223ENST00000557511 CYP2D7A0A087X1C5 515 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 MAP3K7O43318 606 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 RAD21O60216 631 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 HOXD10P28358 340 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 ICA1Q05084 483 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 PPARAQ07869 468 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 RRP1BQ14684 758 aaKnown RBP9.89□□□□□ -0.83
PSEN1-223ENST00000557511 SEPT2Q15019 361 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 ZYXQ15942 572 aaKnown RBP9.89□□□□□ -0.83
PSEN1-223ENST00000557511 SH3D19Q5HYK7 790 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 CASC1Q6TDU7 716 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 CCAR1Q8IX12 1150 aaKnown RBP9.89□□□□□ -0.83
PSEN1-223ENST00000557511 SLC44A5Q8NCS7 719 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 GTF3C2Q8WUA4 911 aaPredicted RBP9.89□□□□□ -0.83
PSEN1-223ENST00000557511 KANSL2Q9H9L4 492 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 EFCC1Q9HA90 598 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 CTNNA3Q9UI47 895 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 DOCK1Q14185 1865 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 NAV1Q8NEY1 1877 aa9.89□□□□□ -0.83
PSEN1-223ENST00000557511 MYH1P12882 1939 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 MYH7P12883 1935 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 A0A0D9SFI3 127 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 TSPY3P0CV98 308 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 TSPY8P0CW00 308 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 GCLCP48506 637 aaPredicted RBP9.88□□□□□ -0.83
PSEN1-223ENST00000557511 ALX1Q15699 326 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 GPAT2Q6NUI2 795 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 KIAA1683Q9H0B3 1180 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 RNF41Q9H4P4 317 aaPredicted RBP9.88□□□□□ -0.83
PSEN1-223ENST00000557511 CWC22Q9HCG8 908 aaKnown RBP9.88□□□□□ -0.83
PSEN1-223ENST00000557511 EPB41L4AQ9HCS5 686 aaPredicted RBP9.88□□□□□ -0.83
PSEN1-223ENST00000557511 CPA4Q9UI42 421 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 TRIM17Q9Y577 477 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 FOCADQ5VW36 1801 aa9.88□□□□□ -0.83
PSEN1-223ENST00000557511 RAD50Q92878 1312 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 TSPY2A6NKD2 308 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 USP17L15C9J2P7 530 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 USP17L13C9JLJ4 530 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 USP17L11C9JVI0 530 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 USP17L18D6R9N7 530 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 USP17L22D6RA61 530 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms