RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 MKL1Q969V6 931 aa11.26□□□□□ -0.61
MARK3-208ENST00000554627 TMX3Q96JJ7 454 aa11.26□□□□□ -0.61
MARK3-208ENST00000554627 GBA2Q9HCG7 927 aaPredicted RBP11.26□□□□□ -0.61
MARK3-208ENST00000554627 RBM28Q9NW13 759 aaKnown RBP11.26□□□□□ -0.61
MARK3-208ENST00000554627 CLIP2Q9UDT6 1046 aa11.26□□□□□ -0.61
MARK3-208ENST00000554627 COL11A1P12107 1806 aaPredicted RBP11.25□□□□□ -0.61
MARK3-208ENST00000554627 GOLGA8AA7E2F4 631 aa11.25□□□□□ -0.61
MARK3-208ENST00000554627 PFKFB2O60825 505 aa11.25□□□□□ -0.61
MARK3-208ENST00000554627 CELF2O95319 508 aaKnown RBP11.25□□□□□ -0.61
MARK3-208ENST00000554627 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
MARK3-208ENST00000554627 PDIA3P30101 505 aaKnown RBP11.25□□□□□ -0.61
MARK3-208ENST00000554627 USP14P54578 494 aa11.25□□□□□ -0.61
MARK3-208ENST00000554627 VGLL4Q14135 290 aa11.25□□□□□ -0.61
MARK3-208ENST00000554627 ME3Q16798 604 aa11.25□□□□□ -0.61
MARK3-208ENST00000554627 GMCL1P1Q8NEA9 526 aa11.25□□□□□ -0.61
MARK3-208ENST00000554627 NUP133Q8WUM0 1156 aa11.25□□□□□ -0.61
MARK3-208ENST00000554627 GTF3C6Q969F1 213 aa11.25□□□□□ -0.61
MARK3-208ENST00000554627 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
MARK3-208ENST00000554627 FEZ1Q99689 392 aa11.25□□□□□ -0.61
MARK3-208ENST00000554627 GPHNQ9NQX3 736 aaPredicted RBP11.25□□□□□ -0.61
MARK3-208ENST00000554627 BRPF3Q9ULD4 1205 aa11.25□□□□□ -0.61
MARK3-208ENST00000554627 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.25□□□□□ -0.61
MARK3-208ENST00000554627 RBBP6Q7Z6E9 1792 aaKnown RBP11.25□□□□□ -0.61
MARK3-208ENST00000554627 CPLX1O14810 134 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 CDKL5O76039 1030 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 PTPRAP18433 802 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 GNAQP50148 359 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 FSTL1Q12841 308 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 RTN1Q16799 776 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.24□□□□□ -0.61
MARK3-208ENST00000554627 CLEC10AQ8IUN9 316 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 LRRC47Q8N1G4 583 aaKnown RBP11.24□□□□□ -0.61
MARK3-208ENST00000554627 WDR18Q9BV38 432 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 SENP2Q9HC62 589 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 TMX2Q9Y320 296 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 MYH15Q9Y2K3 1946 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 PARP1P09874 1014 aaKnown RBP11.24□□□□□ -0.61
MARK3-208ENST00000554627 PPATQ06203 517 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 TROAPQ12815 778 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 STK3Q13188 491 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 SHROOM1Q2M3G4 852 aaPredicted RBP11.24□□□□□ -0.61
MARK3-208ENST00000554627 ASPRV1Q53RT3 343 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 DLK2Q6UY11 383 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 ERO1BQ86YB8 467 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 FANCBQ8NB91 859 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 ZNF784Q8NCA9 323 aaPredicted RBP11.24□□□□□ -0.61
MARK3-208ENST00000554627 ZNF280CQ8ND82 737 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 DCAF4Q8WV16 495 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 LPAR1Q92633 364 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 INTS4Q96HW7 963 aaKnown RBP11.24□□□□□ -0.61
MARK3-208ENST00000554627 IPO9Q96P70 1041 aaKnown RBP11.24□□□□□ -0.61
MARK3-208ENST00000554627 LZTS2Q9BRK4 669 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 LARP6Q9BRS8 491 aaKnown RBP11.24□□□□□ -0.61
MARK3-208ENST00000554627 LLPHQ9BRT6 129 aaKnown RBP11.24□□□□□ -0.61
MARK3-208ENST00000554627 FZD1Q9UP38 647 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 KIF3AQ9Y496 699 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 SNCAIPQ9Y6H5 919 aa11.24□□□□□ -0.61
MARK3-208ENST00000554627 RLFQ13129 1914 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 PASKQ96RG2 1323 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 SPDYE5A6NIY4 337 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 C19orf81C9J6K1 198 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 JAG1P78504 1218 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 SCRN1Q12765 414 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 CUL4AQ13619 759 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 GRM4Q14833 912 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 GPATCH4Q5T3I0 446 aaKnown RBP11.23□□□□□ -0.61
MARK3-208ENST00000554627 LDLRAD1Q5T700 205 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 CCDC83Q8IWF9 413 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 GMCL1Q96IK5 515 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 MYL10Q9BUA6 226 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 KIAA1683Q9H0B3 1180 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 VCPKMTQ9H867 229 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 HPS5Q9UPZ3 1129 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 ZHX2Q9Y6X8 837 aa11.23□□□□□ -0.61
MARK3-208ENST00000554627 RAD21O60216 631 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 LARGE1O95461 756 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 SNHG28P0DPA3 235 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 PDHBP11177 359 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 SLC1A4P43007 532 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 BACE1P56817 501 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 CCT2P78371 535 aaKnown RBP11.22□□□□□ -0.61
MARK3-208ENST00000554627 HMGN5P82970 282 aaKnown RBP11.22□□□□□ -0.61
MARK3-208ENST00000554627 PPIL2Q13356 520 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 CCDC96Q2M329 555 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 SLFN13Q68D06 897 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 USP17L2Q6R6M4 530 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 ELP3Q9H9T3 547 aa11.22□□□□□ -0.61
MARK3-208ENST00000554627 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
MARK3-208ENST00000554627 F5H6K3 240 aa11.21□□□□□ -0.61
MARK3-208ENST00000554627 UBE2Q2LH0YL09 131 aa11.21□□□□□ -0.61
MARK3-208ENST00000554627 WDR46O15213 610 aaKnown RBP11.21□□□□□ -0.61
MARK3-208ENST00000554627 RXRAP19793 462 aa11.21□□□□□ -0.61
MARK3-208ENST00000554627 SMARCA1P28370 1054 aa11.21□□□□□ -0.61
MARK3-208ENST00000554627 ECE1P42892 770 aa11.21□□□□□ -0.61
MARK3-208ENST00000554627 KLRC3Q07444 240 aa11.21□□□□□ -0.61
MARK3-208ENST00000554627 MTMR2Q13614 643 aa11.21□□□□□ -0.61
MARK3-208ENST00000554627 SIAH1Q8IUQ4 282 aa11.21□□□□□ -0.61
MARK3-208ENST00000554627 CCDC144CPQ8IYA2 1237 aa11.21□□□□□ -0.61
MARK3-208ENST00000554627 TRIM22Q8IYM9 498 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms