RNA–Protein interactions for RNA: ENST00000553925.1

SEC23A-205, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 3

Gene SEC23A, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-205ENST00000553925 MEIS3P2A8K0S8 358 aa6.36□□□□□ -1.39
SEC23A-205ENST00000553925 GTF2F1P35269 517 aaKnown RBP eCLIP6.36□□□□□ -1.39
SEC23A-205ENST00000553925 CAP2P40123 477 aa6.36□□□□□ -1.39
SEC23A-205ENST00000553925 MESP2Q0VG99 397 aa6.36□□□□□ -1.39
SEC23A-205ENST00000553925 TNNI3KQ59H18 835 aa6.36□□□□□ -1.39
SEC23A-205ENST00000553925 SLC6A19Q695T7 634 aa6.36□□□□□ -1.39
SEC23A-205ENST00000553925 RBBP8NLQ8NC74 664 aaPredicted RBP6.36□□□□□ -1.39
SEC23A-205ENST00000553925 FAM13CQ8NE31 585 aa6.36□□□□□ -1.39
SEC23A-205ENST00000553925 ZSCAN18Q8TBC5 510 aaPredicted RBP6.36□□□□□ -1.39
SEC23A-205ENST00000553925 ACSF2Q96CM8 615 aaPredicted RBP6.36□□□□□ -1.39
SEC23A-205ENST00000553925 ANAPC16Q96DE5 110 aa6.36□□□□□ -1.39
SEC23A-205ENST00000553925 TMEM87BQ96K49 555 aa6.36□□□□□ -1.39
SEC23A-205ENST00000553925 HIRIP3Q9BW71 556 aaPredicted RBP6.36□□□□□ -1.39
SEC23A-205ENST00000553925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.36□□□□□ -1.39
SEC23A-205ENST00000553925 GIPRP48546 466 aa6.35□□□□□ -1.39
SEC23A-205ENST00000553925 OVOS1Q6IE37 1185 aa6.35□□□□□ -1.39
SEC23A-205ENST00000553925 SLC23A3Q6PIS1 610 aa6.35□□□□□ -1.39
SEC23A-205ENST00000553925 LSRQ86X29 649 aaPredicted RBP6.35□□□□□ -1.39
SEC23A-205ENST00000553925 MCATQ8IVS2 390 aaKnown RBP6.35□□□□□ -1.39
SEC23A-205ENST00000553925 CKAP2LQ8IYA6 745 aa6.35□□□□□ -1.39
SEC23A-205ENST00000553925 LIN37Q96GY3 246 aaPredicted RBP6.35□□□□□ -1.39
SEC23A-205ENST00000553925 SHDQ96IW2 340 aa6.35□□□□□ -1.39
SEC23A-205ENST00000553925 TM9SF2Q99805 663 aa6.35□□□□□ -1.39
SEC23A-205ENST00000553925 DUSP23Q9BVJ7 150 aa6.35□□□□□ -1.39
SEC23A-205ENST00000553925 FBRSQ9HAH7 460 aa6.35□□□□□ -1.39
SEC23A-205ENST00000553925 FAM53CQ9NYF3 392 aa6.35□□□□□ -1.39
SEC23A-205ENST00000553925 TJP2Q9UDY2 1190 aa6.35□□□□□ -1.39
SEC23A-205ENST00000553925 R3HCC1Q9Y3T6 440 aaKnown RBP6.35□□□□□ -1.39
SEC23A-205ENST00000553925 LRIG2O94898 1065 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 RAG1P15918 1043 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 OXCT1P55809 520 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 ZP2Q05996 745 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 MPZL3Q6UWV2 235 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 NLRC3Q7RTR2 1065 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 SLFN12Q8IYM2 578 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 FOXQ1Q9C009 403 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 ZNF408Q9H9D4 720 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 PLAGL2Q9UPG8 496 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 MRVI1Q9Y6F6 885 aa6.34□□□□□ -1.39
SEC23A-205ENST00000553925 SLC22A31A6NKX4 558 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 CST3P01034 146 aaPredicted RBP6.33□□□□□ -1.4
SEC23A-205ENST00000553925 CFPP27918 469 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 NKG7Q16617 165 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 ARSHQ5FYA8 562 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 SOGA3Q5TF21 947 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 PRAMEF13Q5VWM6 474 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 CDCP2Q5VXM1 449 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 ARMCX6Q7L4S7 300 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 LRRC56Q8IYG6 542 aaPredicted RBP6.33□□□□□ -1.4
SEC23A-205ENST00000553925 PHACTR4Q8IZ21 702 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 TAB3Q8N5C8 712 aaPredicted RBP6.33□□□□□ -1.4
SEC23A-205ENST00000553925 C19orf47Q8N9M1 422 aaKnown RBP6.33□□□□□ -1.4
SEC23A-205ENST00000553925 MFSD2AQ8NA29 543 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 FLAD1Q8NFF5 587 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 DHX38Q92620 1227 aaKnown RBP6.33□□□□□ -1.4
SEC23A-205ENST00000553925 KRTAP4-11Q9BYQ6 195 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 PRKAG3Q9UGI9 489 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 SLC12A7Q9Y666 1083 aa6.33□□□□□ -1.4
SEC23A-205ENST00000553925 ZNF503-AS2A6NEH8 195 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 NME1P15531 152 aaKnown RBP6.32□□□□□ -1.4
SEC23A-205ENST00000553925 GUCY2CP25092 1073 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 SLBPQ14493 270 aaKnown RBP eCLIP6.32□□□□□ -1.4
SEC23A-205ENST00000553925 NBPF6Q5VWK0 638 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 LILRA6Q6PI73 481 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 SYDE1Q6ZW31 735 aaPredicted RBP6.32□□□□□ -1.4
SEC23A-205ENST00000553925 UBE3DQ7Z6J8 389 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 ANKLE2Q86XL3 938 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 CYB5D2Q8WUJ1 264 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 ATG4CQ96DT6 458 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 NBPF4Q96M43 638 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 PPP1R16BQ96T49 567 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 CNNM2Q9H8M5 875 aa6.32□□□□□ -1.4
SEC23A-205ENST00000553925 KRTAP9-7A8MTY7 169 aa6.31□□□□□ -1.4
SEC23A-205ENST00000553925 CHURC1-FNTBB4DL54 471 aa6.31□□□□□ -1.4
SEC23A-205ENST00000553925 TNFRSF10CO14798 259 aa6.31□□□□□ -1.4
SEC23A-205ENST00000553925 DNAJA2O60884 412 aa6.31□□□□□ -1.4
SEC23A-205ENST00000553925 CCNFP41002 786 aa6.31□□□□□ -1.4
SEC23A-205ENST00000553925 CHMP4BP1P59074 171 aa6.31□□□□□ -1.4
SEC23A-205ENST00000553925 INTS3Q68E01 1043 aaKnown RBP6.31□□□□□ -1.4
SEC23A-205ENST00000553925 ASB11Q8WXH4 323 aa6.31□□□□□ -1.4
SEC23A-205ENST00000553925 CCDC74BQ96LY2 380 aa6.31□□□□□ -1.4
SEC23A-205ENST00000553925 DPH2Q9BQC3 489 aaPredicted RBP6.31□□□□□ -1.4
SEC23A-205ENST00000553925 ANTXR1Q9H6X2 564 aa6.31□□□□□ -1.4
SEC23A-205ENST00000553925 MKNK2Q9HBH9 465 aa6.31□□□□□ -1.4
SEC23A-205ENST00000553925 UPK3BL1B0FP48 263 aa6.3□□□□□ -1.4
SEC23A-205ENST00000553925 UPK3BL2E5RIL1 263 aa6.3□□□□□ -1.4
SEC23A-205ENST00000553925 SMAD7O15105 426 aaKnown RBP6.3□□□□□ -1.4
SEC23A-205ENST00000553925 ZSCAN22P10073 491 aaPredicted RBP6.3□□□□□ -1.4
SEC23A-205ENST00000553925 ETFBP38117 255 aa6.3□□□□□ -1.4
SEC23A-205ENST00000553925 PPP2R5EQ16537 467 aa6.3□□□□□ -1.4
SEC23A-205ENST00000553925 ZNF746Q6NUN9 644 aaPredicted RBP6.3□□□□□ -1.4
SEC23A-205ENST00000553925 PRR23BQ6ZRT6 265 aa6.3□□□□□ -1.4
SEC23A-205ENST00000553925 ANKS3Q6ZW76 656 aa6.3□□□□□ -1.4
SEC23A-205ENST00000553925 FAM169BQ8N8A8 192 aa6.3□□□□□ -1.4
SEC23A-205ENST00000553925 BHLHE22Q8NFJ8 381 aaPredicted RBP6.3□□□□□ -1.4
SEC23A-205ENST00000553925 DNAJC2Q99543 621 aaKnown RBP6.3□□□□□ -1.4
SEC23A-205ENST00000553925 MIPEPQ99797 713 aa6.3□□□□□ -1.4
SEC23A-205ENST00000553925 TRIM55Q9BYV6 548 aa6.3□□□□□ -1.4
SEC23A-205ENST00000553925 PRDM10Q9NQV6 1147 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms