RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 SMTNP53814 917 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 BIRC3Q13489 604 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 TTC31Q49AM3 519 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 ZBTB38Q8NAP3 1195 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 FANCBQ8NB91 859 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 ATP2A2P16615 1042 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 PDIA3P30101 505 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 TGFBRAP1Q8WUH2 860 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 ZSCAN10Q96SZ4 725 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 USP17L12C9JPN9 530 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 USP17L21D6R901 530 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 ACTN4O43707 911 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 PCCAP05165 728 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 LRMPQ12912 555 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 CARD10Q9BWT7 1032 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 DNM3Q9UQ16 869 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 SCRN1Q12765 414 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 BRINP3Q76B58 766 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 C10orf67Q8IYJ2 551 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 ARHGEF35A5YM69 484 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 GOLGA6CA6NDK9 693 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 GOLGA6DP0CG33 693 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 HPDP32754 393 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 LRRC45Q96CN5 670 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 IQCDQ96DY2 449 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 GOLGA6AQ9NYA3 693 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 RBM6P78332 1123 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 SPATA31A3Q5VYP0 1347 aa17.06■□□□□ 0.32
ARHGEF40-202ENST00000553709 CMTR1Q8N1G2 835 aaKnown RBP17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 CCDC63Q8NA47 563 aa17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 CEP170BQ9Y4F5 1589 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 TRIML1Q8N9V2 468 aa17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 UTP11Q9Y3A2 253 aaKnown RBP17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 WDR17Q8IZU2 1322 aa17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 MYO3AQ8NEV4 1616 aa17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 CCDC169A6NNP5 214 aa17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 NCBP1Q09161 790 aaKnown RBP17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 KLHL30Q0D2K2 578 aa17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 TBC1D7Q9P0N9 293 aa17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 TSKSQ9UJT2 592 aa17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 PROSER3Q2NL68 480 aa17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF40-202ENST00000553709 ERCC3P19447 782 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 RPS8P62241 208 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 CEP57Q86XR8 500 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 LRRC8AQ8IWT6 810 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 NELFCDQ8IXH7 590 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 UBL4BQ8N7F7 174 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 TNKSO95271 1327 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 NDUFA8P51970 172 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 CUL4AQ13619 759 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 FBXO18Q8NFZ0 1043 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 SMC6Q96SB8 1091 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 NUCKS1Q9H1E3 243 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 GOLGA6BA6NDN3 693 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 A6NNZ2 444 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 TUBB8Q3ZCM7 444 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 SFMBT2Q5VUG0 894 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 B4GALNT4Q76KP1 1039 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 GPR161Q8N6U8 529 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 PPM1EQ8WY54 764 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 CSRNP2Q9H175 543 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 ANTXR1Q9H6X2 564 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 NKIRAS1Q9NYS0 192 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 SMCO2A6NFE2 343 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 NDUFAB1O14561 156 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 SETDB1Q15047 1291 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 CCDC24Q8N4L8 307 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 TLR7Q9NYK1 1049 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 EXOC7Q9UPT5 735 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 MED23Q9ULK4 1368 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 LRRC7Q96NW7 1537 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 KCNJ18B7U540 433 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 CEP104O60308 925 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 FLOT1O75955 427 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 ATP5DP30049 168 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 KCNJ12Q14500 433 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 BLIDQ8IZY5 108 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 OR8K1Q8NGG5 319 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 IFIH1Q9BYX4 1025 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 RASSF4Q9H2L5 321 aa17.04■□□□□ 0.32
ARHGEF40-202ENST00000553709 RIMS1Q86UR5 1692 aaKnown RBP17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 A0A1W2PQ27 194 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 A0A1W2PQ64 194 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 A0A1W2PQD8 194 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 BTBD18B2RXH4 712 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 CFAP221Q4G0U5 840 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 PSMB7Q99436 277 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 GPR108Q9NPR9 543 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 DIP2AQ14689 1571 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 PTPRUQ92729 1446 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 UBE3CQ15386 1083 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 ZMYM1Q5SVZ6 1142 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 KIAA1524Q8TCG1 905 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 NT5C3AQ9H0P0 336 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 CLIC4Q9Y696 253 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms