RNA–Protein interactions for RNA: ENST00000551984.5

FGD4-215, Transcript of FYVE, RhoGEF and PH domain containing 4, human

TSL 5

Gene FGD4, Length 2,435 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGD4-215	ENST00000551984	SIRT2	Q8IXJ6	389 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	RHPN1	Q8TCX5	695 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	TRIM47	Q96LD4	638 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	DNAJC18	Q9H819	358 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	PI4KB	Q9UBF8	816 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	SRRD	Q9UH36	339 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	AGTPBP1	Q9UPW5	1226 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	NAV1	Q8NEY1	1877 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	CYP2C8	P10632	490 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	OSBP	P22059	807 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	SH3D19	Q5HYK7	790 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	PRPF38B	Q5VTL8	546 aa	Known RBP	7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	GADL1	Q6ZQY3	521 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	CCDC84	Q86UT8	332 aa	Predicted RBP	7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	AACS	Q86V21	672 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	CERS3	Q8IU89	383 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	TGFBRAP1	Q8WUH2	860 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	GINM1	Q9NU53	330 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	MYH7	P12883	1935 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	CYP7A1	P22680	504 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	HOXD10	P28358	340 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	DYNLL1	P63167	89 aa	Known RBP	7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	FOXP4	Q8IVH2	680 aa	Predicted RBP	7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	MAPKAPK5	Q8IW41	473 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	ZNF280C	Q8ND82	737 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	KIF1BP	Q96EK5	621 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	DDX27	Q96GQ7	796 aa	Known RBP	7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	WDR18	Q9BV38	432 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	COG6	Q9Y2V7	657 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	TRIM75P	A6NK02	468 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	USP17L5	A8MUK1	530 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	EVI5	O60447	810 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	HMMR	O75330	724 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	EN2	P19622	333 aa	Predicted RBP	7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	DDIT3	P35638	169 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	HS1BP3	Q53T59	392 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	TREML2	Q5T2D2	321 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	ANP32B	Q92688	251 aa	Known RBP	7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	GTPBP4	Q9BZE4	634 aa	Known RBP	7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	NOL7	Q9UMY1	257 aa	Known RBP	7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	NDUFB9	Q9Y6M9	179 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	MYPN	Q86TC9	1320 aa		7.72	□□□□□ -1.17
FGD4-215	ENST00000551984	RAB11FIP3	O75154	756 aa		7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	IDH1	O75874	414 aa	Known RBP	7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	FMNL1	O95466	1100 aa	Predicted RBP	7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	FCGRT	P55899	365 aa		7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	JAG1	P78504	1218 aa		7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	MAP3K12	Q12852	859 aa		7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	SPP2	Q13103	211 aa		7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	MAGEB6	Q8N7X4	407 aa		7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	SH3TC2	Q8TF17	1288 aa		7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	AS3MT	Q9HBK9	375 aa		7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	IL1RAPL2	Q9NP60	686 aa		7.71	□□□□□ -1.17
FGD4-215	ENST00000551984	PLXNB2	O15031	1838 aa		7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	BHMG1	C9JSJ3	638 aa	Predicted RBP	7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	LETM1	O95202	739 aa	Predicted RBP	7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	ASNS	P08243	561 aa		7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	PDE3A	Q14432	1141 aa		7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	CLASRP	Q8N2M8	674 aa	Known RBP	7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	TNPO1	Q92973	898 aa	Known RBP	7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	ZDHHC16	Q969W1	377 aa		7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	RIOK1	Q9BRS2	568 aa	Known RBP	7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	PNMA3	Q9UL41	463 aa		7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	PALD1	Q9ULE6	856 aa		7.71	□□□□□ -1.18
FGD4-215	ENST00000551984	GRK4	P32298	578 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	HMGCS2	P54868	508 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	TTF1	Q15361	905 aa	Predicted RBP	7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	FAM110C	Q1W6H9	321 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	MIGA1	Q8NAN2	632 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	ZNF830	Q96NB3	372 aa	Predicted RBP	7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	EHD4	Q9H223	541 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	GABRQ	Q9UN88	632 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	VGLL3	A8MV65	326 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	HLA-DOA	P06340	250 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	GCLC	P48506	637 aa	Predicted RBP	7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	BACE1	P56817	501 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	PRKCZ	Q05513	592 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	PABPC4	Q13310	644 aa	Known RBP eCLIP	7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	TATDN1	Q6P1N9	297 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	SASS6	Q6UVJ0	657 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	RAET1E	Q8TD07	263 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	KCTD12	Q96CX2	325 aa	Known RBP	7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	LARP6	Q9BRS8	491 aa	Known RBP	7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	SAP30BP	Q9UHR5	308 aa	Known RBP	7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	ZBTB21	Q9ULJ3	1066 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	MYH8	P13535	1937 aa		7.7	□□□□□ -1.18
FGD4-215	ENST00000551984	TCRBV5S4A2T	A0A5A2	114 aa		7.69	□□□□□ -1.18
FGD4-215	ENST00000551984	C19orf81	C9J6K1	198 aa		7.69	□□□□□ -1.18
FGD4-215	ENST00000551984	IFIT2	P09913	472 aa	Known RBP	7.69	□□□□□ -1.18
FGD4-215	ENST00000551984	PDE6A	P16499	860 aa		7.69	□□□□□ -1.18
FGD4-215	ENST00000551984	HOXA7	P31268	230 aa	Predicted RBP	7.69	□□□□□ -1.18
FGD4-215	ENST00000551984	USP5	P45974	858 aa		7.69	□□□□□ -1.18
FGD4-215	ENST00000551984	IRF5	Q13568	498 aa		7.69	□□□□□ -1.18
FGD4-215	ENST00000551984	MTFR1	Q15390	333 aa		7.69	□□□□□ -1.18
FGD4-215	ENST00000551984	SHROOM1	Q2M3G4	852 aa	Predicted RBP	7.69	□□□□□ -1.18
FGD4-215	ENST00000551984	SLC4A8	Q2Y0W8	1093 aa		7.69	□□□□□ -1.18

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