RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 STRIP1Q5VSL9 837 aa7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 TTLL5Q6EMB2 1281 aa7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 LYPD4Q6UWN0 246 aa7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 DLK2Q6UY11 383 aa7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 RASAL3Q86YV0 1011 aa7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 APOBEC3FQ8IUX4 373 aaKnown RBP7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 OTUD7AQ8TE49 926 aaPredicted RBP7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 ZNF594Q96JF6 807 aaPredicted RBP7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 IL1RAPL2Q9NP60 686 aa7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 GPR108Q9NPR9 543 aa7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 RIPOR2Q9Y4F9 1068 aa7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 AOX1Q06278 1338 aa7.5□□□□□ -1.21
DEPDC4-209ENST00000550587 MED23Q9ULK4 1368 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 UBE2Q2LH0YL09 131 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 PPP1R12BO60237 982 aaPredicted RBP7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 IFIT2P09913 472 aaKnown RBP7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 MX1P20591 662 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 SOX10P56693 466 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 INHBEP58166 350 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 TFCP2Q12800 502 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 LRRC24Q50LG9 513 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 TAF7LQ5H9L4 462 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 TTC22Q5TAA0 569 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 OTUD7BQ6GQQ9 843 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 LDHAL6AQ6ZMR3 332 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 EAF2Q96CJ1 260 aaPredicted RBP7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 CEP126Q9P2H0 1117 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 MINPP1Q9UNW1 487 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 TTC41PQ6P2S7 1318 aa7.49□□□□□ -1.21
DEPDC4-209ENST00000550587 A0A1W2PRU2 124 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 RNF225M0QZC1 329 aaPredicted RBP7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 WNT10BO00744 389 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 ZNF609O15014 1411 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 FKTNO75072 461 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 TBC1D8O95759 1140 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 TM4SF4P48230 202 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 DLGAP5Q15398 846 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 NBPF9Q3BBW0 867 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 SUPT20HL1Q3ZLR7 823 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 C8orf34Q49A92 452 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 AACSQ86V21 672 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 GMLQ99445 158 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 PUS3Q9BZE2 481 aaKnown RBP7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 BCL11AQ9H165 835 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 AKAP2Q9Y2D5 859 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 PAPPA2Q9BXP8 1791 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 ZNF804BA4D1E1 1349 aa7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 ASTN2O75129 1339 aaPredicted RBP7.48□□□□□ -1.21
DEPDC4-209ENST00000550587 TNRC18O15417 2968 aaPredicted RBP7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 MANSC4A6NHS7 340 aaPredicted RBP7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 GPR25O00155 361 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 ERC2O15083 957 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 GLRX3O76003 335 aaKnown RBP7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 IRS1P35568 1242 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 ERVK-9P63128 1117 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 GTF2IP78347 998 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 SRSF11Q05519 484 aaKnown RBP7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 POU4F2Q12837 409 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 PRKG1Q13976 671 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 ARHGEF6Q15052 776 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 TNNI3KQ59H18 835 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 NOM1Q5C9Z4 860 aaKnown RBP7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 DACT2Q5SW24 774 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 PRAMEF18Q5VWM3 479 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 ZNF804AQ7Z570 1209 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 KIAA0825Q8IV33 1275 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 ZNF296Q8WUU4 475 aaPredicted RBP7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 ZNF837Q96EG3 531 aaPredicted RBP7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 GPATCH3Q96I76 525 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 CNNM1Q9NRU3 951 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 ECHDC1Q9NTX5 307 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 ANGEL1Q9UNK9 670 aaKnown RBP7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 FPGT-TNNI3KV9GXZ4 949 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 MROH5Q6ZUA9 1318 aa7.47□□□□□ -1.21
DEPDC4-209ENST00000550587 UNCXA6NJT0 531 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 EIF5BO60841 1220 aaKnown RBP7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 WDHD1O75717 1129 aaPredicted RBP7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 PDE8BO95263 885 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 GSPT1P15170 499 aaKnown RBP7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 ATP5JP18859 108 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 SDSP20132 328 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 SCTRP47872 440 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 RBM5P52756 815 aaKnown RBP eCLIP7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 MARSP56192 900 aaKnown RBP7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 TIMM10P62072 90 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 DBN1Q16643 649 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 METTL24Q5JXM2 366 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 FBXO46Q6PJ61 603 aaPredicted RBP7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 RIPOR1Q6ZS17 1223 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 MOB2Q70IA6 237 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 VGLL2Q8N8G2 317 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 PI4K2BQ8TCG2 481 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 CCDC8Q9H0W5 538 aaPredicted RBP7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 PPP2R3BQ9Y5P8 575 aa7.46□□□□□ -1.22
DEPDC4-209ENST00000550587 A0A1B0GUL7 405 aa7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 CELA2BP08218 269 aaPredicted RBP7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 ZBTB48P10074 688 aaPredicted RBP7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 IREB2P48200 963 aaKnown RBP7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 CHRNDQ07001 517 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms