RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 GNGT1P63211 74 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 RAD51AP2Q09MP3 1159 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 PPFIA1Q13136 1202 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 NBPF14Q5TI25 921 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 DYMQ7RTS9 669 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 CPLX4Q7Z7G2 160 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 ARFGAP2Q8N6H7 521 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 VIRMAQ69YN4 1812 aaKnown RBP11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 USP31Q70CQ4 1352 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 PDE8BO95263 885 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 TXKP42681 527 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 SSR1P43307 286 aaKnown RBP11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 CCT5P48643 541 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 PPP2R5BQ15173 497 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 IFI16Q16666 785 aaKnown RBP11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 TRMT1LQ7Z2T5 733 aaKnown RBP11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 CERS3Q8IU89 383 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 ZBTB38Q8NAP3 1195 aaPredicted RBP11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 NLRC4Q9NPP4 1024 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 AATFQ9NY61 560 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 USP17L12C9JPN9 530 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 USP17L21D6R901 530 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 ZPR1O75312 459 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 SV2BQ7L1I2 683 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 RRAGAQ7L523 313 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 ENGASEQ8NFI3 743 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 LRRC27Q9C0I9 530 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 TEX33O43247 280 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 LDHCP07864 332 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 TNNC1P63316 161 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 SEPT7Q16181 437 aaKnown RBP11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 KIAA0753Q2KHM9 967 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 B4GALNT4Q76KP1 1039 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 TBC1D10CQ8IV04 446 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 KLHL7Q8IXQ5 586 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 UBLCP1Q8WVY7 318 aaPredicted RBP11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 RPGRIP1Q96KN7 1286 aa11.42□□□□□ -0.58
SMARCC2-209ENST00000550164 GSTTP1A0A1W2PQM5 241 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 H7C1W4 665 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 CCNT1O60563 726 aaKnown RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 RPN1P04843 607 aaKnown RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 PCCAP05165 728 aaPredicted RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 PRR29P0C7W0 189 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 SF3A3Q12874 501 aaKnown RBP eCLIP11.41□□□□□ -0.584e-11■■■■■ 39.5
SMARCC2-209ENST00000550164 CYB5R4Q7L1T6 521 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 MB21D2Q8IYB1 491 aaPredicted RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 SCLT1Q96NL6 688 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 ERBB3P21860 1342 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 H7C1D1 291 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 GTPBP6O43824 516 aaPredicted RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 CDC27P30260 824 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 NF2P35240 595 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 GUCY2FP51841 1108 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 ST5P78524 1137 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 NOX5Q96PH1 765 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 PANX2Q96RD6 677 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 ADAMTS2O95450 1211 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 FDPSP14324 419 aaKnown RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 GNA11P29992 359 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 DNM2P50570 870 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 CNNM4Q6P4Q7 775 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 IFT20Q8IY31 132 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 UIMC1Q96RL1 719 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 SRPRBQ9Y5M8 271 aaKnown RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 PTPREP23469 700 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 GBP6Q6ZN66 633 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 RBM43Q6ZSC3 357 aaKnown RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 CRACR2BQ8N4Y2 399 aaPredicted RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 CTNNBL1Q8WYA6 563 aaPredicted RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 KCNB2Q92953 911 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 ZSCAN10Q96SZ4 725 aaPredicted RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 PIH1D3Q9NQM4 214 aaKnown RBP11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 OVOS2A0A0J9YW53 1432 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 OVOS2Q6IE36 1432 aa11.41□□□□□ -0.58
SMARCC2-209ENST00000550164 B4DLN1 442 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 GCOM1H8Y6P7 765 aaPredicted RBP11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 MFAP3LO75121 409 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 MYZAPP0CAP1 466 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 GBP2P32456 591 aaPredicted RBP11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 CYP2C19P33261 490 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 MCAMP43121 646 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 METTL16Q86W50 562 aaKnown RBP11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 RRP36Q96EU6 259 aaKnown RBP11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 SELENOSQ9BQE4 189 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 KCTD16Q68DU8 428 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 CABP7Q86V35 215 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 GPKOWQ92917 476 aaPredicted RBP eCLIP11.4□□□□□ -0.588e-7■■■■□ 23.2
SMARCC2-209ENST00000550164 CAPS2Q9BXY5 557 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 ABCA9Q8IUA7 1624 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 MROH5Q6ZUA9 1318 aa11.4□□□□□ -0.58
SMARCC2-209ENST00000550164 PARP1P09874 1014 aaKnown RBP11.4□□□□□ -0.59
SMARCC2-209ENST00000550164 ARID4AP29374 1257 aaPredicted RBP11.4□□□□□ -0.59
SMARCC2-209ENST00000550164 CYP27A1Q02318 531 aa11.4□□□□□ -0.59
SMARCC2-209ENST00000550164 SCARF1Q14162 830 aa11.4□□□□□ -0.59
SMARCC2-209ENST00000550164 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.59
SMARCC2-209ENST00000550164 TRIM58Q8NG06 486 aa11.4□□□□□ -0.59
SMARCC2-209ENST00000550164 PAGE5Q96GU1 130 aa11.4□□□□□ -0.59
SMARCC2-209ENST00000550164 TRIM31Q9BZY9 425 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms