RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 TMX2Q9Y320 296 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 DOCK3Q8IZD9 2030 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 BRCA2P51587 3418 aa13.62□□□□□ -0.23
BEST3-209ENST00000548658 CYP2D7A0A087X1C5 515 aa13.62□□□□□ -0.23
BEST3-209ENST00000548658 A0A1W2PRG0 241 aa13.62□□□□□ -0.23
BEST3-209ENST00000548658 SGPL1O95470 568 aa13.62□□□□□ -0.23
BEST3-209ENST00000548658 AKR1B1P15121 316 aa13.62□□□□□ -0.23
BEST3-209ENST00000548658 EVX2Q03828 476 aa13.62□□□□□ -0.23
BEST3-209ENST00000548658 Q3C1V9 767 aa13.62□□□□□ -0.23
BEST3-209ENST00000548658 PLEKHH3Q7Z736 793 aa13.62□□□□□ -0.23
BEST3-209ENST00000548658 U2AF1L4Q8WU68 220 aaKnown RBP13.62□□□□□ -0.23
BEST3-209ENST00000548658 UNC93B1Q9H1C4 597 aa13.62□□□□□ -0.23
BEST3-209ENST00000548658 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
BEST3-209ENST00000548658 BAZ2AQ9UIF9 1905 aaKnown RBP13.62□□□□□ -0.23
BEST3-209ENST00000548658 MINDY4BA8MYZ0 360 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
BEST3-209ENST00000548658 RGS2P41220 211 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 TDO2P48775 406 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 GPR142Q7Z601 462 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 MB21D1Q8N884 522 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 EVI5LQ96CN4 794 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 TANGO6Q9C0B7 1094 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 VCPKMTQ9H867 229 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 GOPCQ9HD26 462 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 HMX1Q9NP08 348 aaPredicted RBP13.61□□□□□ -0.23
BEST3-209ENST00000548658 PAK6Q9NQU5 681 aaPredicted RBP13.61□□□□□ -0.23
BEST3-209ENST00000548658 STAP2Q9UGK3 403 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 IVNS1ABPQ9Y6Y0 642 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 RPTORQ8N122 1335 aa13.61□□□□□ -0.23
BEST3-209ENST00000548658 MYH8P13535 1937 aa13.6□□□□□ -0.23
BEST3-209ENST00000548658 MKI67P46013 3256 aaKnown RBP13.6□□□□□ -0.23
BEST3-209ENST00000548658 SPDYE16A6NNV3 312 aaPredicted RBP13.6□□□□□ -0.23
BEST3-209ENST00000548658 WDR46O15213 610 aaKnown RBP13.6□□□□□ -0.23
BEST3-209ENST00000548658 TFRCP02786 760 aaKnown RBP13.6□□□□□ -0.23
BEST3-209ENST00000548658 CYP2B6P20813 491 aa13.6□□□□□ -0.23
BEST3-209ENST00000548658 ZMYM1Q5SVZ6 1142 aa13.6□□□□□ -0.23
BEST3-209ENST00000548658 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
BEST3-209ENST00000548658 IFNL3Q8IZI9 196 aa13.6□□□□□ -0.23
BEST3-209ENST00000548658 ZNF444Q8N0Y2 327 aaPredicted RBP13.6□□□□□ -0.23
BEST3-209ENST00000548658 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
BEST3-209ENST00000548658 HTATIP2Q9BUP3 242 aa13.6□□□□□ -0.23
BEST3-209ENST00000548658 PORCNQ9H237 461 aa13.6□□□□□ -0.23
BEST3-209ENST00000548658 SALL3Q9BXA9 1300 aa13.6□□□□□ -0.23
BEST3-209ENST00000548658 STRNO43815 780 aa13.59□□□□□ -0.23
BEST3-209ENST00000548658 FLOT1O75955 427 aa13.59□□□□□ -0.23
BEST3-209ENST00000548658 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
BEST3-209ENST00000548658 PDE1AP54750 535 aa13.59□□□□□ -0.23
BEST3-209ENST00000548658 ATP2B2Q01814 1243 aa13.59□□□□□ -0.23
BEST3-209ENST00000548658 PDE4BQ07343 736 aa13.59□□□□□ -0.23
BEST3-209ENST00000548658 MORN1Q5T089 497 aa13.59□□□□□ -0.23
BEST3-209ENST00000548658 WDR78Q5VTH9 848 aa13.59□□□□□ -0.23
BEST3-209ENST00000548658 POTEEQ6S8J3 1075 aa13.59□□□□□ -0.23
BEST3-209ENST00000548658 SHISA4Q96DD7 197 aa13.59□□□□□ -0.23
BEST3-209ENST00000548658 DEFB118Q96PH6 123 aa13.59□□□□□ -0.23
BEST3-209ENST00000548658 ROBO3Q96MS0 1386 aa13.58□□□□□ -0.23
BEST3-209ENST00000548658 SLC15A5A6NIM6 579 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 M0R2C6 588 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 PEX10O60683 326 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 CNMDO75829 334 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 ZKSCAN1P17029 563 aaPredicted RBP13.58□□□□□ -0.24
BEST3-209ENST00000548658 RASA1P20936 1047 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 MAP2K5Q13163 448 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 SMC5Q8IY18 1101 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 SPICE1Q8N0Z3 855 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 USP6NLQ92738 828 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 APBA2Q99767 749 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.58□□□□□ -0.24
BEST3-209ENST00000548658 NAPBQ9H115 298 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 BTBD7Q9P203 1132 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 NYAP2Q9P242 653 aa13.58□□□□□ -0.24
BEST3-209ENST00000548658 SMIM22K7EJ46 135 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 FARP2O94887 1054 aaPredicted RBP13.57□□□□□ -0.24
BEST3-209ENST00000548658 PTPREP23469 700 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 PPP4R3BQ5MIZ7 849 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 UBE2Q1Q7Z7E8 422 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 ANKLE1Q8NAG6 615 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 SHCBP1Q8NEM2 672 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 TRIB2Q92519 343 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 SEC62Q99442 399 aaKnown RBP13.57□□□□□ -0.24
BEST3-209ENST00000548658 SPATC1LQ9H0A9 340 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 MROH8Q9H579 483 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 EPB41L4AQ9HCS5 686 aaPredicted RBP13.57□□□□□ -0.24
BEST3-209ENST00000548658 HELLSQ9NRZ9 838 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 SLC5A4Q9NY91 659 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 SYNPO2Q9UMS6 1093 aa13.57□□□□□ -0.24
BEST3-209ENST00000548658 HOXC6P09630 235 aa13.56□□□□□ -0.24
BEST3-209ENST00000548658 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
BEST3-209ENST00000548658 GRB14Q14449 540 aa13.56□□□□□ -0.24
BEST3-209ENST00000548658 MAP3K21Q5TCX8 1036 aa13.56□□□□□ -0.24
BEST3-209ENST00000548658 CLEC10AQ8IUN9 316 aa13.56□□□□□ -0.24
BEST3-209ENST00000548658 DPF3Q92784 378 aa13.56□□□□□ -0.24
BEST3-209ENST00000548658 MOV10L1Q9BXT6 1211 aaKnown RBP13.56□□□□□ -0.24
BEST3-209ENST00000548658 RAD21O60216 631 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 SLC25A27O95847 323 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 PPARAQ07869 468 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 PLS1Q14651 629 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 KIAA1755Q5JYT7 1200 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 MFSD14CQ5VZR4 134 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 DPP9Q86TI2 863 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms