RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 FEZ1Q99689 392 aa8.33□□□□□ -1.08
CALCOCO1-211ENST00000548431 TMEM47Q9BQJ4 181 aa8.33□□□□□ -1.08
CALCOCO1-211ENST00000548431 LRRC2Q9BYS8 371 aa8.33□□□□□ -1.08
CALCOCO1-211ENST00000548431 KIAA1683Q9H0B3 1180 aa8.33□□□□□ -1.08
CALCOCO1-211ENST00000548431 CWC22Q9HCG8 908 aaKnown RBP8.33□□□□□ -1.08
CALCOCO1-211ENST00000548431 CLIP2Q9UDT6 1046 aa8.33□□□□□ -1.08
CALCOCO1-211ENST00000548431 TPCN1Q9ULQ1 816 aa8.33□□□□□ -1.08
CALCOCO1-211ENST00000548431 TMX2Q9Y320 296 aa8.33□□□□□ -1.08
CALCOCO1-211ENST00000548431 TACC3Q9Y6A5 838 aa8.33□□□□□ -1.08
CALCOCO1-211ENST00000548431 USP17L10C9JJH3 530 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 NMT2O60551 498 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 CELF2O95319 508 aaKnown RBP8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 PTPRAP18433 802 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 PDCP20941 246 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 ATP2B2Q01814 1243 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 AKAP17AQ02040 695 aaKnown RBP8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 TROAPQ12815 778 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 CUL4AQ13619 759 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 VGLL4Q14135 290 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 GRM4Q14833 912 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 ME3Q16798 604 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 ERO1BQ86YB8 467 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 FAM177A1Q8N128 213 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 ZNF280CQ8ND82 737 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 NUP133Q8WUM0 1156 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 GBA2Q9HCG7 927 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 PNMA2Q9UL42 364 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 SCAF8Q9UPN6 1271 aaKnown RBP8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 PTPRFP10586 1907 aa8.32□□□□□ -1.08
CALCOCO1-211ENST00000548431 STK36Q9NRP7 1315 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 SPDYE5A6NIY4 337 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 KIF3CO14782 793 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 WDR46O15213 610 aaKnown RBP8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 ITGBL1O95965 494 aaPredicted RBP8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 POTEIP0CG38 1075 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 POTEJP0CG39 1038 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 ZBTB48P10074 688 aaPredicted RBP8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 FDX1P10109 184 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 XBP1P17861 261 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 INPP5BP32019 993 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 GUCY1A2P33402 732 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 SLC1A4P43007 532 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 PPIL2Q13356 520 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 LDLRAD1Q5T700 205 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 PRAMEF18Q5VWM3 479 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 SLFN13Q68D06 897 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 USP17L2Q6R6M4 530 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 NOL8Q76FK4 1167 aaKnown RBP8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 ZKSCAN4Q969J2 545 aaPredicted RBP8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 VCPKMTQ9H867 229 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 ZNF408Q9H9D4 720 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 TMOD4Q9NZQ9 345 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 BRPF3Q9ULD4 1205 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 SMC3Q9UQE7 1217 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 CEP350Q5VT06 3117 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 PHIPQ8WWQ0 1821 aa8.31□□□□□ -1.08
CALCOCO1-211ENST00000548431 PASKQ96RG2 1323 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 PALM3A6NDB9 673 aaPredicted RBP8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 F5H6K3 240 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 hCG_1984214I3L0E3 225 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 CXCL11O14625 94 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 PLA2G6O60733 806 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 CD2BP2O95400 341 aaKnown RBP8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 PDHBP11177 359 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 IFNAR1P17181 557 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 BACE1P56817 501 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 KLRC3Q07444 240 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 SCRN1Q12765 414 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 STK3Q13188 491 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 PABPC4Q13310 644 aaKnown RBP eCLIP8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 PRKG1Q13976 671 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 TMTC3Q6ZXV5 915 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 FASTKD5Q7L8L6 764 aaKnown RBP8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 FAM160B2Q86V87 743 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 TEX2Q8IWB9 1127 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 ZNF713Q8N859 430 aaPredicted RBP8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 FAM184AQ8NB25 1140 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 PROCA1Q8NCQ7 364 aaPredicted RBP8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 CCDC12Q8WUD4 166 aaPredicted RBP8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 CHURC1Q8WUH1 139 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 SLC10A4Q96EP9 437 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 HHIPL1Q96JK4 782 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 C12orf42Q96LP6 360 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 SPZ1Q9BXG8 430 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 RNF26Q9BY78 433 aaPredicted RBP8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 SEC63Q9UGP8 760 aaKnown RBP8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 FEM1BQ9UK73 627 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 HPS5Q9UPZ3 1129 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 SNCAIPQ9Y6H5 919 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 ZHX2Q9Y6X8 837 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 MYH6P13533 1939 aa8.3□□□□□ -1.08
CALCOCO1-211ENST00000548431 KLRF2D3W0D1 207 aa8.29□□□□□ -1.08
CALCOCO1-211ENST00000548431 TRAF5O00463 557 aa8.29□□□□□ -1.08
CALCOCO1-211ENST00000548431 RAD21O60216 631 aa8.29□□□□□ -1.08
CALCOCO1-211ENST00000548431 DEXIO95424 95 aa8.29□□□□□ -1.08
CALCOCO1-211ENST00000548431 NDUFB10O96000 172 aa8.29□□□□□ -1.08
CALCOCO1-211ENST00000548431 BMP3P12645 472 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms