RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 MTA3Q9BTC8 594 aa20.31■□□□□ 0.84
LETMD1-216ENST00000548401 TM6SF1Q9BZW5 370 aa20.31■□□□□ 0.84
LETMD1-216ENST00000548401 CLIP2Q9UDT6 1046 aa20.31■□□□□ 0.84
LETMD1-216ENST00000548401 STX8Q9UNK0 236 aa20.31■□□□□ 0.84
LETMD1-216ENST00000548401 RLFQ13129 1914 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 CPA1P15085 419 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 EXOSC10Q01780 885 aaKnown RBP20.3■□□□□ 0.84
LETMD1-216ENST00000548401 SREBF2Q12772 1141 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 CCDC178Q5BJE1 867 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 GPAT2Q6NUI2 795 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 USP17L2Q6R6M4 530 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 IGDCC4Q8TDY8 1250 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 TTC14Q96N46 770 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 TMEM47Q9BQJ4 181 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 SENP2Q9HC62 589 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 GPHNQ9NQX3 736 aaPredicted RBP20.3■□□□□ 0.84
LETMD1-216ENST00000548401 A0A0G2JMZ2 1700 aa20.3■□□□□ 0.84
LETMD1-216ENST00000548401 IGF2BP3O00425 579 aaKnown RBP eCLIP20.29■□□□□ 0.84
LETMD1-216ENST00000548401 SH2B2O14492 632 aaPredicted RBP20.29■□□□□ 0.84
LETMD1-216ENST00000548401 NDUFB10O96000 172 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 HMGB1P09429 215 aaKnown RBP20.29■□□□□ 0.84
LETMD1-216ENST00000548401 TOP1P11387 765 aaKnown RBP20.29■□□□□ 0.84
LETMD1-216ENST00000548401 VCAM1P19320 739 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 CASTP20810 708 aaKnown RBP20.29■□□□□ 0.84
LETMD1-216ENST00000548401 TM4SF4P48230 202 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 USP14P54578 494 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 TREML2Q5T2D2 321 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 BLOC1S2Q6QNY1 142 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 DHX32Q7L7V1 743 aaKnown RBP20.29■□□□□ 0.84
LETMD1-216ENST00000548401 RASGRP2Q7LDG7 609 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 GMCL1P1Q8NEA9 526 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 LPAR1Q92633 364 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 TMEM87BQ96K49 555 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 TCEANC2Q96MN5 208 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 TBC1D32Q96NH3 1257 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 C22orf23Q9BZE7 217 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 LY9Q9HBG7 655 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 ZSWIM6Q9HCJ5 1215 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 AGTPBP1Q9UPW5 1226 aa20.29■□□□□ 0.84
LETMD1-216ENST00000548401 CEP350Q5VT06 3117 aa20.28■□□□□ 0.84
LETMD1-216ENST00000548401 BTBD19C9JJ37 291 aa20.28■□□□□ 0.84
LETMD1-216ENST00000548401 IFIT3O14879 490 aaKnown RBP20.28■□□□□ 0.84
LETMD1-216ENST00000548401 RPS6KB1P23443 525 aa20.28■□□□□ 0.84
LETMD1-216ENST00000548401 PSMA5P28066 241 aa20.28■□□□□ 0.84
LETMD1-216ENST00000548401 FASTKD5Q7L8L6 764 aaKnown RBP20.28■□□□□ 0.84
LETMD1-216ENST00000548401 FAM43AQ8N2R8 423 aa20.28■□□□□ 0.84
LETMD1-216ENST00000548401 KIF2CQ99661 725 aa20.28■□□□□ 0.84
LETMD1-216ENST00000548401 LRRC2Q9BYS8 371 aa20.28■□□□□ 0.84
LETMD1-216ENST00000548401 GOPCQ9HD26 462 aa20.28■□□□□ 0.84
LETMD1-216ENST00000548401 F5H6K3 240 aa20.27■□□□□ 0.84
LETMD1-216ENST00000548401 INHBEP58166 350 aa20.27■□□□□ 0.84
LETMD1-216ENST00000548401 KLRC3Q07444 240 aa20.27■□□□□ 0.84
LETMD1-216ENST00000548401 SART3Q15020 963 aaKnown RBP20.27■□□□□ 0.84
LETMD1-216ENST00000548401 TMEM67Q5HYA8 995 aa20.27■□□□□ 0.84
LETMD1-216ENST00000548401 GADL1Q6ZQY3 521 aa20.27■□□□□ 0.84
LETMD1-216ENST00000548401 ANKRD23Q86SG2 305 aa20.27■□□□□ 0.84
LETMD1-216ENST00000548401 IFNL1Q8IU54 200 aa20.27■□□□□ 0.84
LETMD1-216ENST00000548401 UPF3BQ9BZI7 483 aaKnown RBP20.27■□□□□ 0.84
LETMD1-216ENST00000548401 UPF2Q9HAU5 1272 aaKnown RBP20.27■□□□□ 0.84
LETMD1-216ENST00000548401 TMOD4Q9NZQ9 345 aa20.27■□□□□ 0.84
LETMD1-216ENST00000548401 WTAPQ15007 396 aa20.26■□□□□ 0.83
LETMD1-216ENST00000548401 IFIT1BQ5T764 474 aaKnown RBP20.26■□□□□ 0.83
LETMD1-216ENST00000548401 RUFY3Q7L099 469 aa20.26■□□□□ 0.83
LETMD1-216ENST00000548401 REM2Q8IYK8 340 aaPredicted RBP20.26■□□□□ 0.83
LETMD1-216ENST00000548401 SPICE1Q8N0Z3 855 aa20.26■□□□□ 0.83
LETMD1-216ENST00000548401 AGXT2Q9BYV1 514 aa20.26■□□□□ 0.83
LETMD1-216ENST00000548401 ZCCHC17Q9NP64 241 aaKnown RBP20.26■□□□□ 0.83
LETMD1-216ENST00000548401 SLC45A1Q9Y2W3 748 aa20.26■□□□□ 0.83
LETMD1-216ENST00000548401 WDR46O15213 610 aaKnown RBP20.25■□□□□ 0.83
LETMD1-216ENST00000548401 SNHG28P0DPA3 235 aa20.25■□□□□ 0.83
LETMD1-216ENST00000548401 LIFRP42702 1097 aa20.25■□□□□ 0.83
LETMD1-216ENST00000548401 FBXL16Q8N461 479 aa20.25■□□□□ 0.83
LETMD1-216ENST00000548401 PNMA1Q8ND90 353 aa20.25■□□□□ 0.83
LETMD1-216ENST00000548401 GMCL1Q96IK5 515 aa20.25■□□□□ 0.83
LETMD1-216ENST00000548401 NUP88Q99567 741 aaPredicted RBP20.25■□□□□ 0.83
LETMD1-216ENST00000548401 RPAP3Q9H6T3 665 aaPredicted RBP20.25■□□□□ 0.83
LETMD1-216ENST00000548401 ERICH2A1L162 156 aa20.24■□□□□ 0.83
LETMD1-216ENST00000548401 PDHBP11177 359 aa20.24■□□□□ 0.83
LETMD1-216ENST00000548401 HOXA7P31268 230 aaPredicted RBP20.24■□□□□ 0.83
LETMD1-216ENST00000548401 SLFN13Q68D06 897 aa20.24■□□□□ 0.83
LETMD1-216ENST00000548401 SGMS1Q86VZ5 419 aa20.24■□□□□ 0.83
LETMD1-216ENST00000548401 JMYQ8N9B5 988 aa20.24■□□□□ 0.83
LETMD1-216ENST00000548401 KAT14Q9H8E8 782 aa20.24■□□□□ 0.83
LETMD1-216ENST00000548401 CYP46A1Q9Y6A2 500 aa20.24■□□□□ 0.83
LETMD1-216ENST00000548401 ADGRA2Q96PE1 1338 aa20.24■□□□□ 0.83
LETMD1-216ENST00000548401 PDHXO00330 501 aa20.23■□□□□ 0.83
LETMD1-216ENST00000548401 FAM83BQ5T0W9 1011 aa20.23■□□□□ 0.83
LETMD1-216ENST00000548401 Q6ZUG5 572 aa20.22■□□□□ 0.83
LETMD1-216ENST00000548401 DCAF4Q8WV16 495 aa20.22■□□□□ 0.83
LETMD1-216ENST00000548401 ASCC2Q9H1I8 757 aaPredicted RBP20.22■□□□□ 0.83
LETMD1-216ENST00000548401 USP17L15C9J2P7 530 aa20.21■□□□□ 0.83
LETMD1-216ENST00000548401 USP17L13C9JLJ4 530 aa20.21■□□□□ 0.83
LETMD1-216ENST00000548401 USP17L11C9JVI0 530 aa20.21■□□□□ 0.83
LETMD1-216ENST00000548401 USP17L18D6R9N7 530 aa20.21■□□□□ 0.83
LETMD1-216ENST00000548401 USP17L22D6RA61 530 aa20.21■□□□□ 0.83
LETMD1-216ENST00000548401 USP17L17D6RBQ6 530 aa20.21■□□□□ 0.83
LETMD1-216ENST00000548401 USP17L19D6RCP7 530 aa20.21■□□□□ 0.83
LETMD1-216ENST00000548401 USP17L20D6RJB6 530 aa20.21■□□□□ 0.83
LETMD1-216ENST00000548401 RAD21O60216 631 aa20.21■□□□□ 0.83
LETMD1-216ENST00000548401 ZNF543Q08ER8 600 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms