RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 ASPNQ9BXN1 380 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 KLHL25Q9H0H3 589 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 ZMYM5Q9UJ78 669 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 RAXQ9Y2V3 346 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 MRPL42Q9Y6G3 142 aaKnown RBP6.14□□□□□ -1.43
PTCH1-216ENST00000548379 CNTNAP4Q9C0A0 1308 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 CCDC85CA6NKD9 419 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 CBFA2T2O43439 604 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 LEFTY1O75610 366 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 CANXP27824 592 aaKnown RBP6.13□□□□□ -1.43
PTCH1-216ENST00000548379 ADMP35318 185 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 RNF4P78317 190 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 TDRD10Q5VZ19 366 aaKnown RBP6.13□□□□□ -1.43
PTCH1-216ENST00000548379 SDE2Q6IQ49 451 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 C22orf34Q6ZV56 151 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 SPATC1Q76KD6 591 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 COX4I2Q96KJ9 171 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 HAUS7Q99871 368 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 KCNF1Q9H3M0 494 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 C7orf69Q9H7B7 122 aa6.13□□□□□ -1.43
PTCH1-216ENST00000548379 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 HMX2A2RU54 273 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 ENPP3O14638 875 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 CAPNS1P04632 268 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 IFRD2Q12894 506 aaPredicted RBP6.12□□□□□ -1.43
PTCH1-216ENST00000548379 NBPF9Q3BBW0 867 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 MTERF2Q49AM1 385 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 OGFOD3Q6PK18 319 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 PRR23CQ6ZRP0 262 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 ZAR1Q86SH2 424 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 GIMAP7Q8NHV1 300 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 TP53INP1Q96A56 240 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 ZNF512BQ96KM6 892 aaPredicted RBP6.12□□□□□ -1.43
PTCH1-216ENST00000548379 HEXIM2Q96MH2 286 aaKnown RBP6.12□□□□□ -1.43
PTCH1-216ENST00000548379 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 KANSL2Q9H9L4 492 aa6.12□□□□□ -1.43
PTCH1-216ENST00000548379 ANKRD34BA5PLL1 514 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 RBAK-RBAKDNI3L0D1 243 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTCH1-216ENST00000548379 ADCY3O60266 1144 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 DIAPH1O60610 1272 aaKnown RBP6.11□□□□□ -1.43
PTCH1-216ENST00000548379 EPHX1P07099 455 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 FAM87AP0C7U9 286 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
PTCH1-216ENST00000548379 PLA2G4EQ3MJ16 856 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 EGFLAMQ63HQ2 1017 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 DCAF15Q66K64 600 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 C7orf61Q8IZ16 206 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 SHISA5Q8N114 240 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 SGSM3Q96HU1 749 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 TPSG1Q9NRR2 321 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 PRR13Q9NZ81 148 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 STOML1Q9UBI4 398 aa6.11□□□□□ -1.43
PTCH1-216ENST00000548379 TP53P04637 393 aaPredicted RBP6.1□□□□□ -1.43
PTCH1-216ENST00000548379 ZNF865P0CJ78 1059 aaPredicted RBP6.1□□□□□ -1.43
PTCH1-216ENST00000548379 SQSTM1Q13501 440 aa6.1□□□□□ -1.43
PTCH1-216ENST00000548379 TCEAL1Q15170 157 aa6.1□□□□□ -1.43
PTCH1-216ENST00000548379 LONRF2Q1L5Z9 754 aa6.1□□□□□ -1.43
PTCH1-216ENST00000548379 C2orf27AQ580R0 203 aa6.1□□□□□ -1.43
PTCH1-216ENST00000548379 RNF43Q68DV7 783 aa6.1□□□□□ -1.43
PTCH1-216ENST00000548379 SH3TC2Q8TF17 1288 aa6.1□□□□□ -1.43
PTCH1-216ENST00000548379 THAP3Q8WTV1 239 aaPredicted RBP6.1□□□□□ -1.43
PTCH1-216ENST00000548379 Q96M66 194 aa6.1□□□□□ -1.43
PTCH1-216ENST00000548379 ZNF451Q9Y4E5 1061 aa6.1□□□□□ -1.43
PTCH1-216ENST00000548379 CCDC180Q9P1Z9 1646 aa6.1□□□□□ -1.43
PTCH1-216ENST00000548379 A0A087WZG4 1122 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 NAT2P11245 290 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 CD247P20963 164 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 CYP7A1P22680 504 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 HSD3B2P26439 372 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 KIR3DL1P43629 444 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 SSRP1Q08945 709 aaKnown RBP6.09□□□□□ -1.43
PTCH1-216ENST00000548379 PLEKHG4Q58EX7 1191 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 HEATR6Q6AI08 1181 aaKnown RBP6.09□□□□□ -1.43
PTCH1-216ENST00000548379 GPAT2Q6NUI2 795 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 CCDC144CPQ8IYA2 1237 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 TBC1D32Q96NH3 1257 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 APBA2Q99767 749 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 SPATA9Q9BWV2 254 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 MKRN2Q9H000 416 aaKnown RBP6.09□□□□□ -1.43
PTCH1-216ENST00000548379 GP6Q9HCN6 339 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 TMEM260Q9NX78 707 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 WHRNQ9P202 907 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 APEX2Q9UBZ4 518 aa6.09□□□□□ -1.43
PTCH1-216ENST00000548379 KDM2BQ8NHM5 1336 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 IQCA1LA6NCM1 817 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 LRRN2O75325 713 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 GDF11O95390 407 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 F13BP05160 661 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 H2AFB1P0C5Y9 115 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 H2AFB2P0C5Z0 115 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 SFRP5Q5T4F7 317 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 TMEM151AQ8N4L1 468 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 DTWD2Q8NBA8 298 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 RCC1LQ96I51 464 aaKnown RBP6.08□□□□□ -1.44
PTCH1-216ENST00000548379 DBNDD2Q9BQY9 259 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 PRDM14Q9GZV8 571 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 PRDM5Q9NQX1 630 aaPredicted RBP6.08□□□□□ -1.44
PTCH1-216ENST00000548379 FAM86C1Q9NVL1 165 aa6.08□□□□□ -1.44
PTCH1-216ENST00000548379 PFDN2Q9UHV9 154 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms