RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 STIM1Q13586 685 aa16.02■□□□□ 0.16
SRP54-202ENST00000546080 DNAJC21Q5F1R6 531 aaKnown RBP16.02■□□□□ 0.16
SRP54-202ENST00000546080 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.16
SRP54-202ENST00000546080 MFSD6Q6ZSS7 791 aa16.02■□□□□ 0.16
SRP54-202ENST00000546080 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.16
SRP54-202ENST00000546080 TAB2Q9NYJ8 693 aa16.02■□□□□ 0.16
SRP54-202ENST00000546080 MYH8P13535 1937 aa16.02■□□□□ 0.16
SRP54-202ENST00000546080 AKAP11Q9UKA4 1901 aa16.02■□□□□ 0.16
SRP54-202ENST00000546080 TCRBV5S4A2TA0A5A2 114 aa16.02■□□□□ 0.15
SRP54-202ENST00000546080 NDUFA10O95299 355 aa16.02■□□□□ 0.15
SRP54-202ENST00000546080 LDHAL6AQ6ZMR3 332 aa16.02■□□□□ 0.15
SRP54-202ENST00000546080 NUP133Q8WUM0 1156 aa16.02■□□□□ 0.15
SRP54-202ENST00000546080 FAM89AQ96GI7 184 aa16.02■□□□□ 0.15
SRP54-202ENST00000546080 YY1AP1Q9H869 796 aa16.02■□□□□ 0.15
SRP54-202ENST00000546080 TRIM10Q9UDY6 481 aa16.02■□□□□ 0.15
SRP54-202ENST00000546080 EPN1Q9Y6I3 576 aaPredicted RBP16.02■□□□□ 0.15
SRP54-202ENST00000546080 BCL9LQ86UU0 1499 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 PSMD14O00487 310 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 ENC1O14682 589 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 TCIRG1Q13488 830 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 RRAGBQ5VZM2 374 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 COG1Q8WTW3 980 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 FERMT2Q96AC1 680 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 CRACR2AQ9BSW2 395 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 HAUS4Q9H6D7 363 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 RIPOR2Q9Y4F9 1068 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 SAR1BQ9Y6B6 198 aa16.01■□□□□ 0.15
SRP54-202ENST00000546080 TARSL2A2RTX5 802 aaKnown RBP16■□□□□ 0.15
SRP54-202ENST00000546080 FAM205CA6NFA0 338 aa16■□□□□ 0.15
SRP54-202ENST00000546080 LRRC10BA6NIK2 292 aa16■□□□□ 0.15
SRP54-202ENST00000546080 PCCAP05165 728 aaPredicted RBP16■□□□□ 0.15
SRP54-202ENST00000546080 CSF1RP07333 972 aa16■□□□□ 0.15
SRP54-202ENST00000546080 XBP1P17861 261 aa16■□□□□ 0.15
SRP54-202ENST00000546080 CKAP4Q07065 602 aaKnown RBP16■□□□□ 0.15
SRP54-202ENST00000546080 MMS19Q96T76 1030 aa16■□□□□ 0.15
SRP54-202ENST00000546080 CHP1Q99653 195 aa16■□□□□ 0.15
SRP54-202ENST00000546080 PLA2G12BQ9BX93 195 aa16■□□□□ 0.15
SRP54-202ENST00000546080 CNNM1Q9NRU3 951 aa16■□□□□ 0.15
SRP54-202ENST00000546080 HDAC6Q9UBN7 1215 aa16■□□□□ 0.15
SRP54-202ENST00000546080 RWDD2AQ9UIY3 292 aa16■□□□□ 0.15
SRP54-202ENST00000546080 REXO2Q9Y3B8 237 aaKnown RBP16■□□□□ 0.15
SRP54-202ENST00000546080 TACC3Q9Y6A5 838 aa16■□□□□ 0.15
SRP54-202ENST00000546080 KCNJ18B7U540 433 aa16■□□□□ 0.15
SRP54-202ENST00000546080 MBD4O95243 580 aa16■□□□□ 0.15
SRP54-202ENST00000546080 BMP15O95972 392 aa16■□□□□ 0.15
SRP54-202ENST00000546080 KRT2P35908 639 aa16■□□□□ 0.15
SRP54-202ENST00000546080 PAK1Q13153 545 aa16■□□□□ 0.15
SRP54-202ENST00000546080 KCNJ12Q14500 433 aa16■□□□□ 0.15
SRP54-202ENST00000546080 TCP11X2Q5H9J9 407 aa16■□□□□ 0.15
SRP54-202ENST00000546080 STAMQ92783 540 aa16■□□□□ 0.15
SRP54-202ENST00000546080 RPGRIP1Q96KN7 1286 aa16■□□□□ 0.15
SRP54-202ENST00000546080 FAM107BQ9H098 131 aa16■□□□□ 0.15
SRP54-202ENST00000546080 CDHR2Q9BYE9 1310 aa16■□□□□ 0.15
SRP54-202ENST00000546080 TIAM2Q8IVF5 1701 aa16■□□□□ 0.15
SRP54-202ENST00000546080 CHD4Q14839 1912 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 CPP00450 1065 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 ATP1A1P05023 1023 aaKnown RBP15.99■□□□□ 0.15
SRP54-202ENST00000546080 EIF5P55010 431 aaKnown RBP15.99■□□□□ 0.15
SRP54-202ENST00000546080 UBXN1Q04323 297 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 TADA2BQ86TJ2 420 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 ZNF654Q8IZM8 581 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 FANCBQ8NB91 859 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 RIN2Q8WYP3 895 aaPredicted RBP15.99■□□□□ 0.15
SRP54-202ENST00000546080 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
SRP54-202ENST00000546080 ITGA6P23229 1130 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 PHKA1P46020 1223 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 CCDC122Q5T0U0 273 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 TMTC2Q8N394 836 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 CAPZA3Q96KX2 299 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 BLZF1Q9H2G9 400 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
SRP54-202ENST00000546080 XDHP47989 1333 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 ZC3H4Q9UPT8 1303 aaKnown RBP15.98■□□□□ 0.15
SRP54-202ENST00000546080 A0A087WUV0 522 aaPredicted RBP15.98■□□□□ 0.15
SRP54-202ENST00000546080 SRGAP2O75044 1071 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 UQCRFS1P1P0C7P4 283 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 GGCXP38435 758 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 TDO2P48775 406 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 SKIDA1Q1XH10 827 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 TSR1Q2NL82 804 aaKnown RBP15.98■□□□□ 0.15
SRP54-202ENST00000546080 FAM76AQ8TAV0 307 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 CAGE1Q8TC20 777 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 STAG1Q8WVM7 1258 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 NELFBQ8WX92 580 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 RNF26Q9BY78 433 aaPredicted RBP15.98■□□□□ 0.15
SRP54-202ENST00000546080 ARMT1Q9H993 441 aa15.98■□□□□ 0.15
SRP54-202ENST00000546080 GUCY2CP25092 1073 aa15.97■□□□□ 0.15
SRP54-202ENST00000546080 ARID4AP29374 1257 aaPredicted RBP15.97■□□□□ 0.15
SRP54-202ENST00000546080 RCAN1P53805 252 aa15.97■□□□□ 0.15
SRP54-202ENST00000546080 EARS2Q5JPH6 523 aaKnown RBP15.97■□□□□ 0.15
SRP54-202ENST00000546080 PAPD7Q5XG87 772 aaKnown RBP15.97■□□□□ 0.15
SRP54-202ENST00000546080 MAGEB6Q8N7X4 407 aa15.97■□□□□ 0.15
SRP54-202ENST00000546080 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
SRP54-202ENST00000546080 EHBP1Q8NDI1 1231 aa15.97■□□□□ 0.15
SRP54-202ENST00000546080 OR8K1Q8NGG5 319 aa15.97■□□□□ 0.15
SRP54-202ENST00000546080 GDAP1L1Q96MZ0 367 aa15.97■□□□□ 0.15
SRP54-202ENST00000546080 DEF6Q9H4E7 631 aa15.97■□□□□ 0.15
SRP54-202ENST00000546080 UBR2Q8IWV8 1755 aa15.97■□□□□ 0.15
SRP54-202ENST00000546080 SHOX2O60902 331 aaPredicted RBP15.97■□□□□ 0.15
SRP54-202ENST00000546080 MICALL1Q8N3F8 863 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms