RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 PFKFB2O60825 505 aa18.75■□□□□ 0.59
TRIM65-204ENST00000543309 PPP2R5BQ15173 497 aa18.75■□□□□ 0.59
TRIM65-204ENST00000543309 ME3Q16798 604 aa18.75■□□□□ 0.59
TRIM65-204ENST00000543309 SHROOM1Q2M3G4 852 aaPredicted RBP18.75■□□□□ 0.59
TRIM65-204ENST00000543309 NOL8Q76FK4 1167 aaKnown RBP18.75■□□□□ 0.59
TRIM65-204ENST00000543309 ZNF654Q8IZM8 581 aa18.75■□□□□ 0.59
TRIM65-204ENST00000543309 PNMA1Q8ND90 353 aa18.75■□□□□ 0.59
TRIM65-204ENST00000543309 ARHGEF10LQ9HCE6 1279 aa18.75■□□□□ 0.59
TRIM65-204ENST00000543309 PICK1Q9NRD5 415 aa18.75■□□□□ 0.59
TRIM65-204ENST00000543309 GOLGA8BA8MQT2 603 aa18.74■□□□□ 0.59
TRIM65-204ENST00000543309 ZBTB43O43298 467 aa18.74■□□□□ 0.59
TRIM65-204ENST00000543309 EEF2P13639 858 aaKnown RBP18.74■□□□□ 0.59
TRIM65-204ENST00000543309 TROAPQ12815 778 aa18.74■□□□□ 0.59
TRIM65-204ENST00000543309 GRM1Q13255 1194 aa18.74■□□□□ 0.59
TRIM65-204ENST00000543309 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.74■□□□□ 0.59
TRIM65-204ENST00000543309 SAPCD2Q86UD0 394 aa18.74■□□□□ 0.59
TRIM65-204ENST00000543309 SIAH1Q8IUQ4 282 aa18.74■□□□□ 0.59
TRIM65-204ENST00000543309 SH2D4AQ9H788 454 aa18.74■□□□□ 0.59
TRIM65-204ENST00000543309 CLIP2Q9UDT6 1046 aa18.74■□□□□ 0.59
TRIM65-204ENST00000543309 USP17L5A8MUK1 530 aa18.73■□□□□ 0.59
TRIM65-204ENST00000543309 CELF2O95319 508 aaKnown RBP18.73■□□□□ 0.59
TRIM65-204ENST00000543309 CUL4AQ13619 759 aa18.73■□□□□ 0.59
TRIM65-204ENST00000543309 CLEC10AQ8IUN9 316 aa18.73■□□□□ 0.59
TRIM65-204ENST00000543309 ANKRD13AQ8IZ07 590 aa18.73■□□□□ 0.59
TRIM65-204ENST00000543309 GTF3C6Q969F1 213 aa18.73■□□□□ 0.59
TRIM65-204ENST00000543309 ZKSCAN4Q969J2 545 aaPredicted RBP18.73■□□□□ 0.59
TRIM65-204ENST00000543309 LARP6Q9BRS8 491 aaKnown RBP18.73■□□□□ 0.59
TRIM65-204ENST00000543309 BEGAINQ9BUH8 593 aa18.73■□□□□ 0.59
TRIM65-204ENST00000543309 SLKQ9H2G2 1235 aaPredicted RBP18.73■□□□□ 0.59
TRIM65-204ENST00000543309 HPS5Q9UPZ3 1129 aa18.73■□□□□ 0.59
TRIM65-204ENST00000543309 CSADQ9Y600 493 aa18.73■□□□□ 0.59
TRIM65-204ENST00000543309 PHIPQ8WWQ0 1821 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 DHX16O60231 1041 aaKnown RBP18.72■□□□□ 0.59
TRIM65-204ENST00000543309 LARGE1O95461 756 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 PTPRAP18433 802 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 MAP2K2P36507 400 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 METAP2P50579 478 aaKnown RBP eCLIP18.72■□□□□ 0.59
TRIM65-204ENST00000543309 VGLL4Q14135 290 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 LDLRAD1Q5T700 205 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 GMCL1P1Q8NEA9 526 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 ABHD8Q96I13 439 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 HHIPL1Q96JK4 782 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 IPO9Q96P70 1041 aaKnown RBP18.72■□□□□ 0.59
TRIM65-204ENST00000543309 WDR18Q9BV38 432 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 AS3MTQ9HBK9 375 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 FZD1Q9UP38 647 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 TMX2Q9Y320 296 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 SNCAIPQ9Y6H5 919 aa18.72■□□□□ 0.59
TRIM65-204ENST00000543309 CCDC196A0A1B0GTZ2 297 aa18.71■□□□□ 0.59
TRIM65-204ENST00000543309 PRKG1Q13976 671 aa18.71■□□□□ 0.59
TRIM65-204ENST00000543309 TTLL12Q14166 644 aaPredicted RBP18.71■□□□□ 0.59
TRIM65-204ENST00000543309 MICU3Q86XE3 530 aa18.71■□□□□ 0.59
TRIM65-204ENST00000543309 FANCBQ8NB91 859 aa18.71■□□□□ 0.59
TRIM65-204ENST00000543309 INTS4Q96HW7 963 aaKnown RBP18.71■□□□□ 0.59
TRIM65-204ENST00000543309 GBA2Q9HCG7 927 aaPredicted RBP18.71■□□□□ 0.59
TRIM65-204ENST00000543309 RBM28Q9NW13 759 aaKnown RBP18.71■□□□□ 0.59
TRIM65-204ENST00000543309 NAP1L2Q9ULW6 460 aaPredicted RBP18.71■□□□□ 0.59
TRIM65-204ENST00000543309 GOLGA8AA7E2F4 631 aa18.7■□□□□ 0.58
TRIM65-204ENST00000543309 AOC2O75106 756 aa18.7■□□□□ 0.58
TRIM65-204ENST00000543309 SNHG28P0DPA3 235 aa18.7■□□□□ 0.58
TRIM65-204ENST00000543309 KIF5BP33176 963 aa18.7■□□□□ 0.58
TRIM65-204ENST00000543309 ATP2B2Q01814 1243 aa18.7■□□□□ 0.58
TRIM65-204ENST00000543309 LRRC47Q8N1G4 583 aaKnown RBP18.7■□□□□ 0.58
TRIM65-204ENST00000543309 C2orf69Q8N8R5 385 aa18.7■□□□□ 0.58
TRIM65-204ENST00000543309 CTCFLQ8NI51 663 aaPredicted RBP18.7■□□□□ 0.58
TRIM65-204ENST00000543309 LLPHQ9BRT6 129 aaKnown RBP18.7■□□□□ 0.58
TRIM65-204ENST00000543309 KIAA1683Q9H0B3 1180 aa18.7■□□□□ 0.58
TRIM65-204ENST00000543309 GOPCQ9HD26 462 aa18.7■□□□□ 0.58
TRIM65-204ENST00000543309 A0A1W2PRG0 241 aa18.69■□□□□ 0.58
TRIM65-204ENST00000543309 SCRN1Q12765 414 aa18.69■□□□□ 0.58
TRIM65-204ENST00000543309 STK3Q13188 491 aa18.69■□□□□ 0.58
TRIM65-204ENST00000543309 GRM4Q14833 912 aa18.69■□□□□ 0.58
TRIM65-204ENST00000543309 RTN1Q16799 776 aa18.69■□□□□ 0.58
TRIM65-204ENST00000543309 MYL10Q9BUA6 226 aa18.69■□□□□ 0.58
TRIM65-204ENST00000543309 ZNF408Q9H9D4 720 aa18.69■□□□□ 0.58
TRIM65-204ENST00000543309 DAXXQ9UER7 740 aaPredicted RBP18.69■□□□□ 0.58
TRIM65-204ENST00000543309 CA12O43570 354 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 PDHBP11177 359 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 ST3GAL1Q11201 340 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 ASPRV1Q53RT3 343 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 ERO1BQ86YB8 467 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 CCDC83Q8IWF9 413 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 NECAB1Q8N987 351 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 ZNF280CQ8ND82 737 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 ACER1Q8TDN7 264 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 NUP133Q8WUM0 1156 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 DCAF4Q8WV16 495 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 GMCL1Q96IK5 515 aa18.68■□□□□ 0.58
TRIM65-204ENST00000543309 FAM217BQ9NTX9 383 aaPredicted RBP18.68■□□□□ 0.58
TRIM65-204ENST00000543309 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.68■□□□□ 0.58
TRIM65-204ENST00000543309 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.68■□□□□ 0.58
TRIM65-204ENST00000543309 SPDYE5A6NIY4 337 aa18.67■□□□□ 0.58
TRIM65-204ENST00000543309 C19orf81C9J6K1 198 aa18.67■□□□□ 0.58
TRIM65-204ENST00000543309 USP17L10C9JJH3 530 aa18.67■□□□□ 0.58
TRIM65-204ENST00000543309 F5H6K3 240 aa18.67■□□□□ 0.58
TRIM65-204ENST00000543309 CDKL5O76039 1030 aa18.67■□□□□ 0.58
TRIM65-204ENST00000543309 PARP1P09874 1014 aaKnown RBP18.67■□□□□ 0.58
TRIM65-204ENST00000543309 GNAQP50148 359 aa18.67■□□□□ 0.58
TRIM65-204ENST00000543309 USP14P54578 494 aa18.67■□□□□ 0.58
TRIM65-204ENST00000543309 CCT2P78371 535 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms