RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 ANKRD18AQ8IVF6 992 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 HNRNPLLQ8WVV9 542 aaKnown RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 CCDC47Q96A33 483 aaKnown RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 WDR24Q96S15 920 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 CRNKL1Q9BZJ0 848 aaKnown RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 ABCF2Q9UG63 623 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 LIMA1Q9UHB6 759 aaKnown RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 N4BP3O15049 544 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 MCM3P25205 808 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 GNAQP50148 359 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 PKN1Q16512 942 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 HSP90AA4PQ58FG1 418 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 GRAMD1CQ8IYS0 662 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 TACC3Q9Y6A5 838 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 V9GY48 417 aaPredicted RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 UBE2Q2LH0YL09 131 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 NTSR2O95665 410 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 CYP2C19P33261 490 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 PPP1R2P41236 205 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 PLA2G4AP47712 749 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 NLRP5P59047 1200 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 RBL2Q08999 1139 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 GOLGA8FQ08AF8 430 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 GOLGA8DPQ0D2H9 430 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 FUT2Q10981 343 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 KARSQ15046 597 aaKnown RBP7.67□□□□□ -1.18
NKRF-204ENST00000542113 KIF4BQ2VIQ3 1234 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 LRRN4CLQ8ND94 238 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 EHBP1Q8NDI1 1231 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 NOC3LQ8WTT2 800 aaKnown RBP7.67□□□□□ -1.18
NKRF-204ENST00000542113 RIOK1Q9BRS2 568 aaKnown RBP7.67□□□□□ -1.18
NKRF-204ENST00000542113 SEC31BQ9NQW1 1179 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 SH3GLB2Q9NR46 395 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 ATP8A2Q9NTI2 1148 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 ARPP21Q9UBL0 812 aaPredicted RBP7.67□□□□□ -1.18
NKRF-204ENST00000542113 NIP7Q9Y221 180 aaKnown RBP eCLIP7.67□□□□□ -1.18
NKRF-204ENST00000542113 BCL9LQ86UU0 1499 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 CNTNAP5Q8WYK1 1306 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 LRRC10BA6NIK2 292 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 PPP1R3GB7ZBB8 358 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 CAMTA2O94983 1202 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 SCG2P13521 617 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 TROAPQ12815 778 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 ZNF658Q5TYW1 1059 aaPredicted RBP7.67□□□□□ -1.18
NKRF-204ENST00000542113 RRAGBQ5VZM2 374 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 GALNT17Q6IS24 598 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 CLEC4GQ6UXB4 293 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 APTXQ7Z2E3 356 aaKnown RBP7.67□□□□□ -1.18
NKRF-204ENST00000542113 SDR42E1Q8WUS8 393 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 EPSTI1Q96J88 318 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 NAPGQ99747 312 aaPredicted RBP7.67□□□□□ -1.18
NKRF-204ENST00000542113 MAGEF1Q9HAY2 307 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 CTNND2Q9UQB3 1225 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 CICQ96RK0 1608 aaPredicted RBP7.67□□□□□ -1.18
NKRF-204ENST00000542113 MYH6P13533 1939 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 H7C1D1 291 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 PTGDRQ13258 359 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 CCDC148Q8NFR7 591 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 SMARCC1Q92922 1105 aaPredicted RBP7.67□□□□□ -1.18
NKRF-204ENST00000542113 TNFRSF25Q93038 417 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 IQCDQ96DY2 449 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 DESI2Q9BSY9 194 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 PARD6BQ9BYG5 372 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 TSPYL1Q9H0U9 437 aa7.67□□□□□ -1.18
NKRF-204ENST00000542113 SRCAPQ6ZRS2 3230 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 SOWAHDA6NJG2 315 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 LAD1O00515 517 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 ZBTB22O15209 634 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 TBC1D8O95759 1140 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 CRKLP46109 303 aaKnown RBP7.66□□□□□ -1.18
NKRF-204ENST00000542113 COPB1P53618 953 aaKnown RBP7.66□□□□□ -1.18
NKRF-204ENST00000542113 SMC1AQ14683 1233 aaKnown RBP7.66□□□□□ -1.18
NKRF-204ENST00000542113 USP49Q70CQ1 688 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 AMOTL1Q8IY63 956 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 CMTR1Q8N1G2 835 aaKnown RBP7.66□□□□□ -1.18
NKRF-204ENST00000542113 NUP88Q99567 741 aaPredicted RBP7.66□□□□□ -1.18
NKRF-204ENST00000542113 UBXN6Q9BZV1 441 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 BSDC1Q9NW68 430 aaPredicted RBP7.66□□□□□ -1.18
NKRF-204ENST00000542113 CWC15Q9P013 229 aaKnown RBP7.66□□□□□ -1.18
NKRF-204ENST00000542113 RREB1Q92766 1687 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 CTAGE15A4D2H0 777 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 TEX33O43247 280 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 CTAGE8P0CG41 777 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 EEF1GP26641 437 aaKnown RBP7.66□□□□□ -1.18
NKRF-204ENST00000542113 CASP14P31944 242 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 ATP6V1AP38606 617 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 STX17P56962 302 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 SF3B3Q15393 1217 aaKnown RBP7.66□□□□□ -1.18
NKRF-204ENST00000542113 ZNF174Q15697 407 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 PFKFB3Q16875 520 aaPredicted RBP7.66□□□□□ -1.18
NKRF-204ENST00000542113 SBK1Q52WX2 424 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 ZNF569Q5MCW4 686 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 WWC2Q6AWC2 1192 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 HDXQ7Z353 690 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 CTAGE6Q86UF2 777 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 CTAGE4Q8IX94 777 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 MSANTD4Q8NCY6 345 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 RPGRIP1Q96KN7 1286 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 CUEDC2Q9H467 287 aa7.66□□□□□ -1.18
NKRF-204ENST00000542113 MRPL44Q9H9J2 332 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms