RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ASPNQ9BXN1 380 aa10.01□□□□□ -0.81
YBX3-210ENST00000540975 E9PSI1 815 aa10□□□□□ -0.81
YBX3-210ENST00000540975 TNFRSF10CO14798 259 aa10□□□□□ -0.81
YBX3-210ENST00000540975 ERCC5P28715 1186 aaPredicted RBP10□□□□□ -0.81
YBX3-210ENST00000540975 SOX9P48436 509 aa10□□□□□ -0.81
YBX3-210ENST00000540975 IRAK1P51617 712 aa10□□□□□ -0.81
YBX3-210ENST00000540975 CHMP4BP1P59074 171 aa10□□□□□ -0.81
YBX3-210ENST00000540975 RBBP8NLQ8NC74 664 aaPredicted RBP10□□□□□ -0.81
YBX3-210ENST00000540975 SLC9A7Q96T83 725 aa10□□□□□ -0.81
YBX3-210ENST00000540975 CCSER2Q9H7U1 834 aa10□□□□□ -0.81
YBX3-210ENST00000540975 INPP5FQ9Y2H2 1132 aa10□□□□□ -0.81
YBX3-210ENST00000540975 SRFP11831 508 aa9.99□□□□□ -0.81
YBX3-210ENST00000540975 PI4K2BQ8TCG2 481 aa9.99□□□□□ -0.81
YBX3-210ENST00000540975 GPR62Q9BZJ7 368 aa9.99□□□□□ -0.81
YBX3-210ENST00000540975 LMCD1Q9NZU5 365 aa9.99□□□□□ -0.81
YBX3-210ENST00000540975 WASH4PA8MWX3 477 aa9.98□□□□□ -0.81
YBX3-210ENST00000540975 ZP2Q05996 745 aa9.98□□□□□ -0.81
YBX3-210ENST00000540975 ZNF792Q3KQV3 632 aa9.98□□□□□ -0.81
YBX3-210ENST00000540975 NBPF12Q5TAG4 269 aaPredicted RBP9.98□□□□□ -0.81
YBX3-210ENST00000540975 CBLL1Q75N03 491 aa9.98□□□□□ -0.81
YBX3-210ENST00000540975 ACRP10323 421 aa9.97□□□□□ -0.81
YBX3-210ENST00000540975 TMEM192Q8IY95 271 aa9.97□□□□□ -0.81
YBX3-210ENST00000540975 MBNL3Q9NUK0 354 aaKnown RBP9.97□□□□□ -0.81
YBX3-210ENST00000540975 ADAMTS6Q9UKP5 1117 aa9.97□□□□□ -0.81
YBX3-210ENST00000540975 CLEC3AO75596 197 aa9.96□□□□□ -0.82
YBX3-210ENST00000540975 RNASE1P07998 156 aaKnown RBP9.96□□□□□ -0.82
YBX3-210ENST00000540975 NASPP49321 788 aaPredicted RBP9.96□□□□□ -0.82
YBX3-210ENST00000540975 SLC23A3Q6PIS1 610 aa9.96□□□□□ -0.82
YBX3-210ENST00000540975 CCDC81Q6ZN84 652 aa9.96□□□□□ -0.82
YBX3-210ENST00000540975 TAB3Q8N5C8 712 aaPredicted RBP9.96□□□□□ -0.82
YBX3-210ENST00000540975 SEC16BQ96JE7 1060 aa9.96□□□□□ -0.82
YBX3-210ENST00000540975 CRBNQ96SW2 442 aa9.96□□□□□ -0.82
YBX3-210ENST00000540975 TM9SF2Q99805 663 aa9.96□□□□□ -0.82
YBX3-210ENST00000540975 TRIT1Q9H3H1 467 aaKnown RBP9.96□□□□□ -0.82
YBX3-210ENST00000540975 GPATCH2Q9NW75 528 aa9.96□□□□□ -0.82
YBX3-210ENST00000540975 TPP2P29144 1249 aaPredicted RBP9.95□□□□□ -0.82
YBX3-210ENST00000540975 RNF4P78317 190 aa9.95□□□□□ -0.82
YBX3-210ENST00000540975 RUFY4Q6ZNE9 571 aa9.95□□□□□ -0.82
YBX3-210ENST00000540975 TMPRSS7Q7RTY8 843 aa9.95□□□□□ -0.82
YBX3-210ENST00000540975 CARS2Q9HA77 564 aaKnown RBP9.95□□□□□ -0.82
YBX3-210ENST00000540975 PRDM7Q9NQW5 492 aa9.95□□□□□ -0.82
YBX3-210ENST00000540975 IGSF5Q9NSI5 407 aa9.95□□□□□ -0.82
YBX3-210ENST00000540975 ESR1P03372 595 aa9.94□□□□□ -0.82
YBX3-210ENST00000540975 TAL1P17542 331 aaPredicted RBP9.94□□□□□ -0.82
YBX3-210ENST00000540975 EIF6P56537 245 aaKnown RBP9.94□□□□□ -0.82
YBX3-210ENST00000540975 GAB4Q2WGN9 574 aa9.94□□□□□ -0.82
YBX3-210ENST00000540975 NBPF9Q3BBW0 867 aa9.94□□□□□ -0.82
YBX3-210ENST00000540975 TSPYL5Q86VY4 417 aaPredicted RBP9.94□□□□□ -0.82
YBX3-210ENST00000540975 LSRQ86X29 649 aaPredicted RBP9.94□□□□□ -0.82
YBX3-210ENST00000540975 ZNF512BQ96KM6 892 aaPredicted RBP9.94□□□□□ -0.82
YBX3-210ENST00000540975 SLC6A18Q96N87 628 aa9.94□□□□□ -0.82
YBX3-210ENST00000540975 GIPRP48546 466 aa9.93□□□□□ -0.82
YBX3-210ENST00000540975 DHRS1Q96LJ7 313 aa9.93□□□□□ -0.82
YBX3-210ENST00000540975 SRRTQ9BXP5 876 aaKnown RBP9.93□□□□□ -0.82
YBX3-210ENST00000540975 SHISA3A0PJX4 238 aa9.92□□□□□ -0.82
YBX3-210ENST00000540975 FAM86C2PA6NEL3 165 aa9.92□□□□□ -0.82
YBX3-210ENST00000540975 GUCY2CP25092 1073 aa9.92□□□□□ -0.82
YBX3-210ENST00000540975 UNC5AQ6ZN44 842 aa9.92□□□□□ -0.82
YBX3-210ENST00000540975 CREG2Q8IUH2 290 aa9.92□□□□□ -0.82
YBX3-210ENST00000540975 CAPN10Q9HC96 672 aa9.92□□□□□ -0.82
YBX3-210ENST00000540975 ATF4P18848 351 aaPredicted RBP9.91□□□□□ -0.82
YBX3-210ENST00000540975 ZYXQ15942 572 aaKnown RBP9.91□□□□□ -0.82
YBX3-210ENST00000540975 CPLX3Q8WVH0 158 aa9.91□□□□□ -0.82
YBX3-210ENST00000540975 RC3H2Q9HBD1 1191 aaKnown RBP9.91□□□□□ -0.82
YBX3-210ENST00000540975 SUCOQ9UBS9 1254 aaKnown RBP9.91□□□□□ -0.82
YBX3-210ENST00000540975 CLEC16AQ2KHT3 1053 aa9.9□□□□□ -0.82
YBX3-210ENST00000540975 MCTP1Q6DN14 999 aa9.9□□□□□ -0.82
YBX3-210ENST00000540975 VPS37DQ86XT2 251 aa9.9□□□□□ -0.82
YBX3-210ENST00000540975 LRRN4CLQ8ND94 238 aa9.9□□□□□ -0.82
YBX3-210ENST00000540975 ENOX1Q8TC92 643 aaKnown RBP9.9□□□□□ -0.82
YBX3-210ENST00000540975 SHDQ96IW2 340 aa9.9□□□□□ -0.82
YBX3-210ENST00000540975 ASCC2Q9H1I8 757 aaPredicted RBP9.9□□□□□ -0.82
YBX3-210ENST00000540975 DUSP13Q9UII6 198 aa9.9□□□□□ -0.82
YBX3-210ENST00000540975 NMIQ13287 307 aaPredicted RBP9.89□□□□□ -0.83
YBX3-210ENST00000540975 SNW1Q13573 536 aaKnown RBP9.89□□□□□ -0.83
YBX3-210ENST00000540975 OR6P1Q8NGX9 317 aa9.89□□□□□ -0.83
YBX3-210ENST00000540975 C9IYK1 514 aa9.88□□□□□ -0.83
YBX3-210ENST00000540975 PMS1P54277 932 aaKnown RBP9.88□□□□□ -0.83
YBX3-210ENST00000540975 TMC3Q7Z5M5 1100 aa9.88□□□□□ -0.83
YBX3-210ENST00000540975 PRDM14Q9GZV8 571 aa9.88□□□□□ -0.83
YBX3-210ENST00000540975 MKRN2Q9H000 416 aaKnown RBP9.88□□□□□ -0.83
YBX3-210ENST00000540975 LTBP3Q9NS15 1303 aa9.87□□□□□ -0.83
YBX3-210ENST00000540975 ITGB5P18084 799 aa9.87□□□□□ -0.83
YBX3-210ENST00000540975 GNL2Q13823 731 aaKnown RBP9.87□□□□□ -0.83
YBX3-210ENST00000540975 AUHQ13825 339 aaKnown RBP9.87□□□□□ -0.83
YBX3-210ENST00000540975 ATG4DQ86TL0 474 aaPredicted RBP9.87□□□□□ -0.83
YBX3-210ENST00000540975 DAGLBQ8NCG7 672 aa9.87□□□□□ -0.83
YBX3-210ENST00000540975 SYTL5Q8TDW5 730 aaPredicted RBP9.87□□□□□ -0.83
YBX3-210ENST00000540975 ALPK1Q96QP1 1244 aa9.87□□□□□ -0.83
YBX3-210ENST00000540975 EGR3Q06889 387 aa9.86□□□□□ -0.83
YBX3-210ENST00000540975 TTC6Q86TZ1 520 aa9.86□□□□□ -0.83
YBX3-210ENST00000540975 HDAC8Q9BY41 377 aa9.86□□□□□ -0.83
YBX3-210ENST00000540975 FBXL21Q9UKT6 434 aa9.86□□□□□ -0.83
YBX3-210ENST00000540975 ZNF214Q9UL59 606 aaPredicted RBP9.86□□□□□ -0.83
YBX3-210ENST00000540975 STRIP2Q9ULQ0 834 aa9.86□□□□□ -0.83
YBX3-210ENST00000540975 PCDHA11Q9Y5I1 949 aa9.86□□□□□ -0.83
YBX3-210ENST00000540975 A0A1W2PQH9 124 aa9.85□□□□□ -0.83
YBX3-210ENST00000540975 ANKRD39Q53RE8 183 aa9.85□□□□□ -0.83
YBX3-210ENST00000540975 RALGPS1Q5JS13 557 aa9.85□□□□□ -0.83
YBX3-210ENST00000540975 PPFIBP1Q86W92 1011 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms