RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ZNF70Q9UC06 446 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-214ENST00000540865 SERPINA10Q9UK55 444 aa5.91□□□□□ -1.46
SNHG1-214ENST00000540865 AOX1Q06278 1338 aa5.91□□□□□ -1.46
SNHG1-214ENST00000540865 MYPNQ86TC9 1320 aa5.91□□□□□ -1.46
SNHG1-214ENST00000540865 PSME4Q14997 1843 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-214ENST00000540865 DDX58O95786 925 aaKnown RBP5.9□□□□□ -1.46
SNHG1-214ENST00000540865 TNNI2P48788 182 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 RBM5P52756 815 aaKnown RBP eCLIP5.9□□□□□ -1.46
SNHG1-214ENST00000540865 KCNMA1Q12791 1236 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 PPIL2Q13356 520 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 EML3Q32P44 896 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 DUSP27Q5VZP5 1158 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 NECAB2Q7Z6G3 386 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 ANKRD23Q86SG2 305 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 TDHQ8IZJ6 230 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 KDF1Q8NAX2 398 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-214ENST00000540865 PURBQ96QR8 312 aaKnown RBP5.9□□□□□ -1.46
SNHG1-214ENST00000540865 MPHOSPH8Q99549 860 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 METTL22Q9BUU2 404 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-214ENST00000540865 PCGF6Q9BYE7 350 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 PHAXQ9H814 394 aaKnown RBP5.9□□□□□ -1.46
SNHG1-214ENST00000540865 CPA4Q9UI42 421 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 LAS1LQ9Y4W2 734 aaKnown RBP5.9□□□□□ -1.46
SNHG1-214ENST00000540865 SNCAIPQ9Y6H5 919 aa5.9□□□□□ -1.46
SNHG1-214ENST00000540865 IRS2Q9Y4H2 1338 aa5.9□□□□□ -1.47
SNHG1-214ENST00000540865 PRUNE2Q8WUY3 3088 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 PDHXO00330 501 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 ADCY3O60266 1144 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 ITGA6P23229 1130 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 FCGRTP55899 365 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 RELBQ01201 579 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 PRKCZQ05513 592 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 PPATQ06203 517 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 CHRNDQ07001 517 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 USP4Q13107 963 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 FAM109BQ6ICB4 259 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-214ENST00000540865 MRPL14Q6P1L8 145 aaKnown RBP5.89□□□□□ -1.47
SNHG1-214ENST00000540865 Q6ZVU0 165 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 ZNF804AQ7Z570 1209 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 PLEKHM2Q8IWE5 1019 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 HOOK2Q96ED9 719 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 PAWRQ96IZ0 340 aaKnown RBP5.89□□□□□ -1.47
SNHG1-214ENST00000540865 CHMP4AQ9BY43 222 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 TMEM39BQ9GZU3 492 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 TDRD3Q9H7E2 651 aaKnown RBP5.89□□□□□ -1.47
SNHG1-214ENST00000540865 ZNF395Q9H8N7 513 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-214ENST00000540865 PAK6Q9NQU5 681 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-214ENST00000540865 RAB6BQ9NRW1 208 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 FAM205AQ6ZU69 1335 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 RPTORQ8N122 1335 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 ADGRA2Q96PE1 1338 aa5.89□□□□□ -1.47
SNHG1-214ENST00000540865 EYSQ5T1H1 3165 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 LAMB1P07942 1786 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 ZNF646O15015 1829 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-214ENST00000540865 TCP10L2B9ZVM9 353 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 H7C1W4 665 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 INHAP05111 366 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 IGKV5-2P06315 115 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 ADH1AP07327 375 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 CSF1RP07333 972 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 BCRP11274 1271 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 MAGEA10P43363 369 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-214ENST00000540865 CLDN10P78369 228 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 C6orf118Q5T5N4 469 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 DZIP1LQ8IYY4 767 aaKnown RBP5.88□□□□□ -1.47
SNHG1-214ENST00000540865 C7orf61Q8IZ16 206 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 MEIOBQ8N635 442 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 ZKSCAN4Q969J2 545 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-214ENST00000540865 DEFB118Q96PH6 123 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 WRNIP1Q96S55 665 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 PARK7Q99497 189 aaKnown RBP5.88□□□□□ -1.47
SNHG1-214ENST00000540865 PLA2G12BQ9BX93 195 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 ZMYND8Q9ULU4 1186 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-214ENST00000540865 KIAA1024Q9UPX6 916 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 KCNH4Q9UQ05 1017 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 PCDHGA11Q9Y5H2 935 aa5.88□□□□□ -1.47
SNHG1-214ENST00000540865 SNAP23O00161 211 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 ELNP15502 786 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 CRKP46108 304 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 FLT3LGP49771 235 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 NEXNQ0ZGT2 675 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 MOGSQ13724 837 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 FKBP1CQ5VVH2 108 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 DCAF15Q66K64 600 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 KSR2Q6VAB6 950 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 LINC00528Q8N1L1 170 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 GUCD1Q96NT3 240 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 UBE2OQ9C0C9 1292 aaKnown RBP5.87□□□□□ -1.47
SNHG1-214ENST00000540865 ARHGEF10LQ9HCE6 1279 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 GABRQQ9UN88 632 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 TTF2Q9UNY4 1162 aaKnown RBP5.87□□□□□ -1.47
SNHG1-214ENST00000540865 NOD1Q9Y239 953 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 MAP3K2Q9Y2U5 619 aa5.87□□□□□ -1.47
SNHG1-214ENST00000540865 ANKRD18BA2A2Z9 1011 aa5.86□□□□□ -1.47
SNHG1-214ENST00000540865 PI4KAP2A4QPH2 592 aa5.86□□□□□ -1.47
SNHG1-214ENST00000540865 NEURL1BA8MQ27 555 aa5.86□□□□□ -1.47
SNHG1-214ENST00000540865 CXCL11O14625 94 aa5.86□□□□□ -1.47
SNHG1-214ENST00000540865 TAF5LO75529 589 aa5.86□□□□□ -1.47
SNHG1-214ENST00000540865 HDLBPQ00341 1268 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms