RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 KRT9P35527 623 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 COPB1P53618 953 aaKnown RBP11.62□□□□□ -0.55
GPD2-213ENST00000540309 AKAP17AQ02040 695 aaKnown RBP11.62□□□□□ -0.55
GPD2-213ENST00000540309 PWP2Q15269 919 aaKnown RBP11.62□□□□□ -0.55
GPD2-213ENST00000540309 KRT31Q15323 416 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 CERS3Q8IU89 383 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 CCDC155Q8N6L0 562 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 ACRBPQ8NEB7 543 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.62□□□□□ -0.552e-6■■■■■ 55.6
GPD2-213ENST00000540309 CAVIN3Q969G5 261 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 PAGE5Q96GU1 130 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 KAT14Q9H8E8 782 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 LY9Q9HBG7 655 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 CAPN11Q9UMQ6 739 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 RANBP6O60518 1105 aaKnown RBP11.61□□□□□ -0.55
GPD2-213ENST00000540309 PPFIA3O75145 1194 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 XBP1P17861 261 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 EEF1GP26641 437 aaKnown RBP11.61□□□□□ -0.55
GPD2-213ENST00000540309 CYLC1P35663 651 aaPredicted RBP11.61□□□□□ -0.55
GPD2-213ENST00000540309 TCP11X2Q5H9J9 407 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 TMED8Q6PL24 325 aaPredicted RBP11.61□□□□□ -0.55
GPD2-213ENST00000540309 MAGEC3Q8TD91 643 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 BCAS4Q8TDM0 211 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 NOC3LQ8WTT2 800 aaKnown RBP11.61□□□□□ -0.55
GPD2-213ENST00000540309 ZNF622Q969S3 477 aaKnown RBP eCLIP11.61□□□□□ -0.55
GPD2-213ENST00000540309 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
GPD2-213ENST00000540309 SLC12A7Q9Y666 1083 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 MYH13Q9UKX3 1938 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 GRIN2DO15399 1336 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 MYH6P13533 1939 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 MEFVO15553 781 aaPredicted RBP11.61□□□□□ -0.55
GPD2-213ENST00000540309 MYL1P05976 194 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 MYL6BP14649 208 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 ADD2P35612 726 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 CCT5P48643 541 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 MNAT1P51948 309 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 EPHB4P54760 987 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 HAND2P61296 217 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 FIGNQ5HY92 759 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 NCAPH2Q6IBW4 605 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 CCDC50Q8IVM0 306 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 AIFM3Q96NN9 605 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 KRT23Q9C075 422 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 RNF14Q9UBS8 474 aa11.61□□□□□ -0.55
GPD2-213ENST00000540309 PKD1L3Q7Z443 1732 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 GLI3P10071 1580 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 TRIM75PA6NK02 468 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 BTBD18B2RXH4 712 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 CHUKO15111 745 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 KIAA0754O94854 1291 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 IPO7O95373 1038 aaKnown RBP11.6□□□□□ -0.55
GPD2-213ENST00000540309 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
GPD2-213ENST00000540309 FNTAP49354 379 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 CD302Q8IX05 232 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 EIF1ADQ8N9N8 165 aaKnown RBP11.6□□□□□ -0.55
GPD2-213ENST00000540309 CPLX3Q8WVH0 158 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 KAT2BQ92831 832 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 JAKMIP2Q96AA8 810 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
GPD2-213ENST00000540309 MMS19Q96T76 1030 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 PLA2G12BQ9BX93 195 aa11.6□□□□□ -0.55
GPD2-213ENST00000540309 PUS7LQ9H0K6 701 aaKnown RBP11.6□□□□□ -0.55
GPD2-213ENST00000540309 LUC7L2Q9Y383 392 aaKnown RBP11.6□□□□□ -0.55
GPD2-213ENST00000540309 REXO2Q9Y3B8 237 aaKnown RBP11.6□□□□□ -0.55
GPD2-213ENST00000540309 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
GPD2-213ENST00000540309 PAK1Q13153 545 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 MLECQ14165 292 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 SART3Q15020 963 aaKnown RBP11.59□□□□□ -0.55
GPD2-213ENST00000540309 PTPN21Q16825 1174 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 CCDC122Q5T0U0 273 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 ZNF658Q5TYW1 1059 aaPredicted RBP11.59□□□□□ -0.55
GPD2-213ENST00000540309 CYB5R4Q7L1T6 521 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 TTC5Q8N0Z6 440 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 THEMISQ8N1K5 641 aaPredicted RBP11.59□□□□□ -0.55
GPD2-213ENST00000540309 MREGQ8N565 214 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 TRIM58Q8NG06 486 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 PHKBQ93100 1093 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 LRRC59Q96AG4 307 aaKnown RBP11.59□□□□□ -0.55
GPD2-213ENST00000540309 ZNF496Q96IT1 587 aaPredicted RBP11.59□□□□□ -0.55
GPD2-213ENST00000540309 DCAF5Q96JK2 942 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 SLF1Q9BQI6 1058 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 RNF26Q9BY78 433 aaPredicted RBP11.59□□□□□ -0.55
GPD2-213ENST00000540309 CSRNP2Q9H175 543 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 A0A0U1RQJ8 604 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 GTPBP6O43824 516 aaPredicted RBP11.59□□□□□ -0.55
GPD2-213ENST00000540309 GCP02774 474 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 TCP1P17987 556 aaKnown RBP11.59□□□□□ -0.55
GPD2-213ENST00000540309 TRAPPC10P48553 1259 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 SMTNP53814 917 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 ZNF827Q17R98 1081 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 HSP90AA4PQ58FG1 418 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 TMEM67Q5HYA8 995 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 KCNV1Q6PIU1 500 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 CRACR2BQ8N4Y2 399 aaPredicted RBP11.59□□□□□ -0.55
GPD2-213ENST00000540309 ATRIPQ8WXE1 791 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 SLC26A6Q9BXS9 759 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 GUCA1BQ9UMX6 200 aa11.59□□□□□ -0.55
GPD2-213ENST00000540309 A0A1W2PQJ5 194 aa11.58□□□□□ -0.56
GPD2-213ENST00000540309 LGALS16A8MUM7 142 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms