RNA–Protein interactions for RNA: ENST00000538243.1

KDM2B-207, Transcript of lysine demethylase 2B, humanhuman

TSL 2

Gene KDM2B, Length 4,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-207ENST00000538243 GSPT2Q8IYD1 628 aaKnown RBP18.28■□□□□ 0.52
KDM2B-207ENST00000538243 RBM28Q9NW13 759 aaKnown RBP18.28■□□□□ 0.52
KDM2B-207ENST00000538243 AATFQ9NY61 560 aaKnown RBP eCLIP18.28■□□□□ 0.52
KDM2B-207ENST00000538243 FBXO3Q9UK99 471 aa18.28■□□□□ 0.52
KDM2B-207ENST00000538243 CEP104O60308 925 aa18.27■□□□□ 0.52
KDM2B-207ENST00000538243 CCNT1O60563 726 aaKnown RBP18.27■□□□□ 0.52
KDM2B-207ENST00000538243 PRR29P0C7W0 189 aa18.27■□□□□ 0.52
KDM2B-207ENST00000538243 IFT20Q8IY31 132 aa18.27■□□□□ 0.52
KDM2B-207ENST00000538243 NOX5Q96PH1 765 aa18.27■□□□□ 0.52
KDM2B-207ENST00000538243 PAIP2Q9BPZ3 127 aaKnown RBP18.27■□□□□ 0.52
KDM2B-207ENST00000538243 B4DLN1 442 aa18.27■□□□□ 0.52
KDM2B-207ENST00000538243 USP17L12C9JPN9 530 aa18.27■□□□□ 0.52
KDM2B-207ENST00000538243 USP17L21D6R901 530 aa18.27■□□□□ 0.52
KDM2B-207ENST00000538243 DCAF17Q5H9S7 520 aaPredicted RBP18.27■□□□□ 0.52
KDM2B-207ENST00000538243 JRKLQ9Y4A0 524 aa18.27■□□□□ 0.52
KDM2B-207ENST00000538243 ADGRB3O60242 1522 aa18.27■□□□□ 0.51
KDM2B-207ENST00000538243 PPARAQ07869 468 aa18.27■□□□□ 0.51
KDM2B-207ENST00000538243 NAA25Q14CX7 972 aa18.27■□□□□ 0.51
KDM2B-207ENST00000538243 NBPF14Q5TI25 921 aa18.27■□□□□ 0.51
KDM2B-207ENST00000538243 LRRN4CLQ8ND94 238 aa18.27■□□□□ 0.51
KDM2B-207ENST00000538243 C6orf50Q9HD87 102 aa18.27■□□□□ 0.51
KDM2B-207ENST00000538243 TMEM110-MUSTN1A8MSY1 372 aa18.26■□□□□ 0.51
KDM2B-207ENST00000538243 BCAMP50895 628 aa18.26■□□□□ 0.51
KDM2B-207ENST00000538243 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
KDM2B-207ENST00000538243 RASGRP4Q8TDF6 673 aa18.26■□□□□ 0.51
KDM2B-207ENST00000538243 GPKOWQ92917 476 aaPredicted RBP eCLIP18.26■□□□□ 0.51
KDM2B-207ENST00000538243 MLH3Q9UHC1 1453 aa18.26■□□□□ 0.51
KDM2B-207ENST00000538243 BAG3O95817 575 aa18.26■□□□□ 0.51
KDM2B-207ENST00000538243 IFI16Q16666 785 aaKnown RBP18.26■□□□□ 0.51
KDM2B-207ENST00000538243 SV2BQ7L1I2 683 aa18.26■□□□□ 0.51
KDM2B-207ENST00000538243 GSDMAQ96QA5 445 aa18.26■□□□□ 0.51
KDM2B-207ENST00000538243 SH2B2O14492 632 aaPredicted RBP18.25■□□□□ 0.51
KDM2B-207ENST00000538243 ADAMTS2O95450 1211 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 C2orf54Q08AI8 447 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 PNMA8AQ86V59 439 aaPredicted RBP18.25■□□□□ 0.51
KDM2B-207ENST00000538243 NELFCDQ8IXH7 590 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 SUGCTQ9HAC7 445 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 CTDNEP1O95476 244 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 MMP1P03956 469 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 SLC7A5Q01650 507 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 CEP85LQ5SZL2 805 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 CRACR2BQ8N4Y2 399 aaPredicted RBP18.25■□□□□ 0.51
KDM2B-207ENST00000538243 RPN1P04843 607 aaKnown RBP18.25■□□□□ 0.51
KDM2B-207ENST00000538243 MAP2K2P36507 400 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 CDC27P30260 824 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 INF2Q27J81 1249 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 NUP58Q9BVL2 599 aa18.25■□□□□ 0.51
KDM2B-207ENST00000538243 PDE8AO60658 829 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 VIMP08670 466 aaKnown RBP18.24■□□□□ 0.51
KDM2B-207ENST00000538243 COL9A3Q14050 684 aaPredicted RBP18.24■□□□□ 0.51
KDM2B-207ENST00000538243 CFAP221Q4G0U5 840 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.24■□□□□ 0.51
KDM2B-207ENST00000538243 MFAP3LO75121 409 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 DNM2P50570 870 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 TSGA10IPQ3SY00 556 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 RESP18Q5W5W9 173 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 CCDC24Q8N4L8 307 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 TAOK3Q9H2K8 898 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 SAP30BPQ9UHR5 308 aaKnown RBP18.24■□□□□ 0.51
KDM2B-207ENST00000538243 ADGRG1Q9Y653 693 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 PAK2Q13177 524 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 ARHGEF25Q86VW2 580 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 METTL16Q86W50 562 aaKnown RBP18.24■□□□□ 0.51
KDM2B-207ENST00000538243 TBC1D10CQ8IV04 446 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 CCDC155Q8N6L0 562 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 TRIM58Q8NG06 486 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 RPGRIP1Q96KN7 1286 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 HDAC6Q9UBN7 1215 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 SETBP1Q9Y6X0 1596 aa18.24■□□□□ 0.51
KDM2B-207ENST00000538243 F8W031 263 aaPredicted RBP18.23■□□□□ 0.51
KDM2B-207ENST00000538243 NDUFA10O95299 355 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 PARP1P09874 1014 aaKnown RBP18.23■□□□□ 0.51
KDM2B-207ENST00000538243 ATP6V1AP38606 617 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 KRT31Q15323 416 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 SLC9C1Q4G0N8 1177 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 CYB5R4Q7L1T6 521 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 MRFAP1Q9Y605 127 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 H7C1D1 291 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 IFNAR1P17181 557 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 EIF6P56537 245 aaKnown RBP18.23■□□□□ 0.51
KDM2B-207ENST00000538243 GUCY2DQ02846 1103 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 ANKS4BQ8N8V4 417 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 ENGASEQ8NFI3 743 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 TUBGCP2Q9BSJ2 902 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 SLC39A2Q9NP94 309 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 MED23Q9ULK4 1368 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 PLA2G4AP47712 749 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 VSNL1P62760 191 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 CABP7Q86V35 215 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 FOXP1Q9H334 677 aaPredicted RBP18.23■□□□□ 0.51
KDM2B-207ENST00000538243 ZNF609O15014 1411 aa18.23■□□□□ 0.51
KDM2B-207ENST00000538243 EIF3CLB5ME19 914 aaKnown RBP18.22■□□□□ 0.51
KDM2B-207ENST00000538243 ARID4AP29374 1257 aaPredicted RBP18.22■□□□□ 0.51
KDM2B-207ENST00000538243 PICALMQ13492 652 aa18.22■□□□□ 0.51
KDM2B-207ENST00000538243 CNNM4Q6P4Q7 775 aa18.22■□□□□ 0.51
KDM2B-207ENST00000538243 EIF3CQ99613 913 aaKnown RBP18.22■□□□□ 0.51
KDM2B-207ENST00000538243 GDAQ9Y2T3 454 aa18.22■□□□□ 0.51
KDM2B-207ENST00000538243 GTPBP6O43824 516 aaPredicted RBP18.22■□□□□ 0.51
KDM2B-207ENST00000538243 TBCAO75347 108 aaKnown RBP18.22■□□□□ 0.51
KDM2B-207ENST00000538243 FMNL1O95466 1100 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms