RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 TBC1D2Q9BYX2 928 aa15.49■□□□□ 0.07
CHFR-216ENST00000538235 VCPKMTQ9H867 229 aa15.49■□□□□ 0.07
CHFR-216ENST00000538235 KANSL2Q9H9L4 492 aa15.49■□□□□ 0.07
CHFR-216ENST00000538235 TOMM22Q9NS69 142 aa15.49■□□□□ 0.07
CHFR-216ENST00000538235 SAGE1Q9NXZ1 904 aa15.49■□□□□ 0.07
CHFR-216ENST00000538235 ZSWIM5Q9P217 1185 aa15.49■□□□□ 0.07
CHFR-216ENST00000538235 CTNNA3Q9UI47 895 aa15.49■□□□□ 0.07
CHFR-216ENST00000538235 MYH6P13533 1939 aa15.49■□□□□ 0.07
CHFR-216ENST00000538235 CA12O43570 354 aa15.48■□□□□ 0.07
CHFR-216ENST00000538235 NDUFB10O96000 172 aa15.48■□□□□ 0.07
CHFR-216ENST00000538235 SLC3A2P08195 630 aaKnown RBP15.48■□□□□ 0.07
CHFR-216ENST00000538235 LBX1P52954 281 aa15.48■□□□□ 0.07
CHFR-216ENST00000538235 SEC23AQ15436 765 aa15.48■□□□□ 0.07
CHFR-216ENST00000538235 ASCC2Q9H1I8 757 aaPredicted RBP15.48■□□□□ 0.07
CHFR-216ENST00000538235 FBXO28Q9NVF7 368 aa15.48■□□□□ 0.07
CHFR-216ENST00000538235 CLIP2Q9UDT6 1046 aa15.48■□□□□ 0.07
CHFR-216ENST00000538235 C19orf81C9J6K1 198 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 CNMDO75829 334 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 CPA1P15085 419 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 HSPA4P34932 840 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 INHBEP58166 350 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 ENAHQ8N8S7 591 aaPredicted RBP15.47■□□□□ 0.07
CHFR-216ENST00000538235 MKL1Q969V6 931 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 TMEM47Q9BQJ4 181 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 USP26Q9BXU7 913 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 RPAP3Q9H6T3 665 aaPredicted RBP15.47■□□□□ 0.07
CHFR-216ENST00000538235 TXNRD2Q9NNW7 524 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 TCP11L1Q9NUJ3 509 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 CPA4Q9UI42 421 aa15.47■□□□□ 0.07
CHFR-216ENST00000538235 TNKSO95271 1327 aa15.46■□□□□ 0.07
CHFR-216ENST00000538235 BCRP11274 1271 aa15.46■□□□□ 0.07
CHFR-216ENST00000538235 HOXA7P31268 230 aaPredicted RBP15.46■□□□□ 0.07
CHFR-216ENST00000538235 FAM83BQ5T0W9 1011 aa15.46■□□□□ 0.07
CHFR-216ENST00000538235 C17orf99Q6UX52 265 aa15.46■□□□□ 0.07
CHFR-216ENST00000538235 KIAA1211Q6ZU35 1233 aa15.46■□□□□ 0.07
CHFR-216ENST00000538235 FASTKD5Q7L8L6 764 aaKnown RBP15.46■□□□□ 0.07
CHFR-216ENST00000538235 REM2Q8IYK8 340 aaPredicted RBP15.46■□□□□ 0.07
CHFR-216ENST00000538235 TCEANC2Q96MN5 208 aa15.46■□□□□ 0.07
CHFR-216ENST00000538235 P2RX7Q99572 595 aaKnown RBP15.46■□□□□ 0.07
CHFR-216ENST00000538235 ARHGAP39Q9C0H5 1083 aa15.46■□□□□ 0.07
CHFR-216ENST00000538235 RNF41Q9H4P4 317 aaPredicted RBP15.46■□□□□ 0.07
CHFR-216ENST00000538235 ARHGEF10LQ9HCE6 1279 aa15.46■□□□□ 0.07
CHFR-216ENST00000538235 ZCCHC17Q9NP64 241 aaKnown RBP15.46■□□□□ 0.07
CHFR-216ENST00000538235 SNX14Q9Y5W7 946 aa15.46■□□□□ 0.07
CHFR-216ENST00000538235 ZNFX1Q9P2E3 1918 aaKnown RBP15.46■□□□□ 0.07
CHFR-216ENST00000538235 RBBP6Q7Z6E9 1792 aaKnown RBP15.45■□□□□ 0.06
CHFR-216ENST00000538235 SPDYE16A6NNV3 312 aaPredicted RBP15.45■□□□□ 0.06
CHFR-216ENST00000538235 F5H6K3 240 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 GPR25O00155 361 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 TTLL1O95922 423 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 PCP11498 1178 aaKnown RBP15.45■□□□□ 0.06
CHFR-216ENST00000538235 KLRC3Q07444 240 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 CASC1Q6TDU7 716 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 CATSPERGQ6ZRH7 1159 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 ZNF296Q8WUU4 475 aaPredicted RBP15.45■□□□□ 0.06
CHFR-216ENST00000538235 ESR2Q92731 530 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 LRRC2Q9BYS8 371 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 ZNF287Q9HBT7 754 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 STX8Q9UNK0 236 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 SLC45A1Q9Y2W3 748 aa15.45■□□□□ 0.06
CHFR-216ENST00000538235 BAZ2BQ9UIF8 2168 aaKnown RBP15.45■□□□□ 0.06
CHFR-216ENST00000538235 TLR2O60603 784 aa15.44■□□□□ 0.06
CHFR-216ENST00000538235 ECM2O94769 699 aaPredicted RBP15.44■□□□□ 0.06
CHFR-216ENST00000538235 TAL1P17542 331 aaPredicted RBP15.44■□□□□ 0.06
CHFR-216ENST00000538235 SLC35G1Q2M3R5 365 aa15.44■□□□□ 0.06
CHFR-216ENST00000538235 GMCL1P1Q8NEA9 526 aa15.44■□□□□ 0.06
CHFR-216ENST00000538235 ZSCAN10Q96SZ4 725 aaPredicted RBP15.44■□□□□ 0.06
CHFR-216ENST00000538235 TMOD4Q9NZQ9 345 aa15.44■□□□□ 0.06
CHFR-216ENST00000538235 PLXNA1Q9UIW2 1896 aa15.44■□□□□ 0.06
CHFR-216ENST00000538235 ZNF236Q9UL36 1845 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 WDR46O15213 610 aaKnown RBP15.43■□□□□ 0.06
CHFR-216ENST00000538235 USP14P54578 494 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 HERVK_113P62684 666 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 TSGA10IPQ3SY00 556 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 TTBK2Q6IQ55 1244 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 REPS2Q8NFH8 660 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 ANKS1AQ92625 1134 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 ATG4CQ96DT6 458 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 KRT23Q9C075 422 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 CPVLQ9H3G5 476 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 BTBD7Q9P203 1132 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 RBPJLQ9UBG7 517 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 MTMR7Q9Y216 660 aa15.43■□□□□ 0.06
CHFR-216ENST00000538235 ALDH1A1P00352 501 aa15.42■□□□□ 0.06
CHFR-216ENST00000538235 SNHG28P0DPA3 235 aa15.42■□□□□ 0.06
CHFR-216ENST00000538235 CTCFP49711 727 aaPredicted RBP15.42■□□□□ 0.06
CHFR-216ENST00000538235 SLFN13Q68D06 897 aa15.42■□□□□ 0.06
CHFR-216ENST00000538235 NCOA7Q8NI08 942 aa15.42■□□□□ 0.06
CHFR-216ENST00000538235 CD99L2Q8TCZ2 262 aa15.42■□□□□ 0.06
CHFR-216ENST00000538235 IGDCC4Q8TDY8 1250 aa15.42■□□□□ 0.06
CHFR-216ENST00000538235 PARK7Q99497 189 aaKnown RBP15.42■□□□□ 0.06
CHFR-216ENST00000538235 CNNM2Q9H8M5 875 aa15.42■□□□□ 0.06
CHFR-216ENST00000538235 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
CHFR-216ENST00000538235 ZFYVE28Q9HCC9 887 aa15.42■□□□□ 0.06
CHFR-216ENST00000538235 FRMPD2Q68DX3 1309 aaPredicted RBP15.42■□□□□ 0.06
CHFR-216ENST00000538235 USP17L15C9J2P7 530 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 USP17L13C9JLJ4 530 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 USP17L11C9JVI0 530 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 USP17L18D6R9N7 530 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 USP17L22D6RA61 530 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms