RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 USP17L2Q6R6M4 530 aa13.56□□□□□ -0.24
SNHG1-206ENST00000537925 C12orf42Q96LP6 360 aa13.56□□□□□ -0.24
SNHG1-206ENST00000537925 NBPF3Q9H094 633 aa13.56□□□□□ -0.24
SNHG1-206ENST00000537925 KANSL2Q9H9L4 492 aa13.56□□□□□ -0.24
SNHG1-206ENST00000537925 EMILIN3Q9NT22 766 aa13.56□□□□□ -0.24
SNHG1-206ENST00000537925 TMOD4Q9NZQ9 345 aa13.56□□□□□ -0.24
SNHG1-206ENST00000537925 DOCK3Q8IZD9 2030 aa13.56□□□□□ -0.24
SNHG1-206ENST00000537925 GOLGA6L22H0YM25 854 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 ORC4O43929 436 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 TLR2O60603 784 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 USP14P54578 494 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 HAND2P61296 217 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 ICA1Q05084 483 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 NEDD1Q8NHV4 660 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 ESYT1Q9BSJ8 1104 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 INCENPQ9NQS7 918 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 TMX2Q9Y320 296 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 ADGRA2Q96PE1 1338 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 COL11A1P12107 1806 aaPredicted RBP13.55□□□□□ -0.24
SNHG1-206ENST00000537925 ZNF213O14771 459 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 PCP11498 1178 aaKnown RBP13.55□□□□□ -0.24
SNHG1-206ENST00000537925 HOXA7P31268 230 aaPredicted RBP13.55□□□□□ -0.24
SNHG1-206ENST00000537925 PTH1RQ03431 593 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 PABPC4Q13310 644 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNHG1-206ENST00000537925 AKNAD1Q5T1N1 836 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 ZNF296Q8WUU4 475 aaPredicted RBP13.55□□□□□ -0.24
SNHG1-206ENST00000537925 FEZ1Q99689 392 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 ARHGEF10LQ9HCE6 1279 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 CTNNA3Q9UI47 895 aa13.55□□□□□ -0.24
SNHG1-206ENST00000537925 TSPY3P0CV98 308 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 TSPY8P0CW00 308 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 CYP2C8P10632 490 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 EEF2P13639 858 aaKnown RBP13.54□□□□□ -0.24
SNHG1-206ENST00000537925 TFAP4Q01664 338 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 ZYXQ15942 572 aaKnown RBP13.54□□□□□ -0.24
SNHG1-206ENST00000537925 FAM47AQ5JRC9 791 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 C17orf99Q6UX52 265 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 TBC1D10CQ8IV04 446 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 STAG1Q8WVM7 1258 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 PARK7Q99497 189 aaKnown RBP13.54□□□□□ -0.24
SNHG1-206ENST00000537925 SH2D4AQ9H788 454 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 NYAP2Q9P242 653 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 PNMA3Q9UL41 463 aa13.54□□□□□ -0.24
SNHG1-206ENST00000537925 A0A0G2JMZ2 1700 aa13.53□□□□□ -0.24
SNHG1-206ENST00000537925 FKTNO75072 461 aa13.53□□□□□ -0.24
SNHG1-206ENST00000537925 MCCP23508 829 aa13.53□□□□□ -0.24
SNHG1-206ENST00000537925 IMMTQ16891 758 aaKnown RBP13.53□□□□□ -0.24
SNHG1-206ENST00000537925 MFSD6Q6ZSS7 791 aa13.53□□□□□ -0.24
SNHG1-206ENST00000537925 MAP4K1Q92918 833 aa13.53□□□□□ -0.24
SNHG1-206ENST00000537925 CEP95Q96GE4 821 aa13.53□□□□□ -0.24
SNHG1-206ENST00000537925 RNF41Q9H4P4 317 aaPredicted RBP13.53□□□□□ -0.24
SNHG1-206ENST00000537925 MTMR4Q9NYA4 1195 aa13.53□□□□□ -0.24
SNHG1-206ENST00000537925 TSPY2A6NKD2 308 aa13.52□□□□□ -0.25
SNHG1-206ENST00000537925 RANBP6O60518 1105 aaKnown RBP13.52□□□□□ -0.25
SNHG1-206ENST00000537925 XRCC6P12956 609 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNHG1-206ENST00000537925 VCAM1P19320 739 aa13.52□□□□□ -0.25
SNHG1-206ENST00000537925 NT5C2P49902 561 aa13.52□□□□□ -0.25
SNHG1-206ENST00000537925 SP3Q02447 781 aa13.52□□□□□ -0.25
SNHG1-206ENST00000537925 KIAA1755Q5JYT7 1200 aa13.52□□□□□ -0.25
SNHG1-206ENST00000537925 MKL1Q969V6 931 aa13.52□□□□□ -0.25
SNHG1-206ENST00000537925 LSG1Q9H089 658 aaKnown RBP13.52□□□□□ -0.25
SNHG1-206ENST00000537925 ASCC2Q9H1I8 757 aaPredicted RBP13.52□□□□□ -0.25
SNHG1-206ENST00000537925 VCPKMTQ9H867 229 aa13.52□□□□□ -0.25
SNHG1-206ENST00000537925 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.25
SNHG1-206ENST00000537925 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 BCRP11274 1271 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 OSBPP22059 807 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 NOVP48745 357 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 ATP2B2Q01814 1243 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 KLHL40Q2TBA0 621 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 CATSPERGQ6ZRH7 1159 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 NKX2-3Q8TAU0 364 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 LPAR1Q92633 364 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 IL17RBQ9NRM6 502 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 CLIP2Q9UDT6 1046 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 CPA4Q9UI42 421 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 SYNPO2Q9UMS6 1093 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 NEDD4P46934 1319 aa13.51□□□□□ -0.25
SNHG1-206ENST00000537925 TTLL1O95922 423 aa13.5□□□□□ -0.25
SNHG1-206ENST00000537925 CYP21A2P08686 494 aa13.5□□□□□ -0.25
SNHG1-206ENST00000537925 RRP12Q5JTH9 1297 aaKnown RBP13.5□□□□□ -0.25
SNHG1-206ENST00000537925 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
SNHG1-206ENST00000537925 SMCR8Q8TEV9 937 aaPredicted RBP13.5□□□□□ -0.25
SNHG1-206ENST00000537925 P2RX7Q99572 595 aaKnown RBP13.5□□□□□ -0.25
SNHG1-206ENST00000537925 RPAP3Q9H6T3 665 aaPredicted RBP13.5□□□□□ -0.25
SNHG1-206ENST00000537925 TOMM22Q9NS69 142 aa13.5□□□□□ -0.25
SNHG1-206ENST00000537925 TCP11L1Q9NUJ3 509 aa13.5□□□□□ -0.25
SNHG1-206ENST00000537925 BAG4O95429 457 aaKnown RBP13.49□□□□□ -0.25
SNHG1-206ENST00000537925 GCLCP48506 637 aaPredicted RBP13.49□□□□□ -0.25
SNHG1-206ENST00000537925 HERVK_113P62684 666 aa13.49□□□□□ -0.25
SNHG1-206ENST00000537925 IRX3P78415 501 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms