RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 IRF6O14896 467 aa28.39■■■□□ 2.14
HMGA2-208ENST00000537429 GJA5P36382 358 aa28.39■■■□□ 2.14
HMGA2-208ENST00000537429 BACE1P56817 501 aa28.39■■■□□ 2.14
HMGA2-208ENST00000537429 HHIPL1Q96JK4 782 aa28.39■■■□□ 2.14
HMGA2-208ENST00000537429 LARP6Q9BRS8 491 aaKnown RBP28.39■■■□□ 2.14
HMGA2-208ENST00000537429 TRIM75PA6NK02 468 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 CD2BP2O95400 341 aaKnown RBP28.38■■■□□ 2.13
HMGA2-208ENST00000537429 RGMBQ6NW40 437 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 APOA5Q6Q788 366 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 PAXIP1Q6ZW49 1069 aaPredicted RBP28.38■■■□□ 2.13
HMGA2-208ENST00000537429 ZNF654Q8IZM8 581 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 WNK4Q96J92 1243 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 FEZ1Q99689 392 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 SLC12A7Q9Y666 1083 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 KLF18A0A0U1RQI7 1052 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 F5H6K3 240 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 KLRC3Q07444 240 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 TROAPQ12815 778 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 MTMR2Q13614 643 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 CATIPQ7Z7H3 387 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 GMCL1P1Q8NEA9 526 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 KCNH4Q9UQ05 1017 aa28.38■■■□□ 2.13
HMGA2-208ENST00000537429 C19orf81C9J6K1 198 aa28.37■■■□□ 2.13
HMGA2-208ENST00000537429 CXCL11O14625 94 aa28.37■■■□□ 2.13
HMGA2-208ENST00000537429 VCPKMTQ9H867 229 aa28.37■■■□□ 2.13
HMGA2-208ENST00000537429 TSHZ2Q9NRE2 1034 aa28.37■■■□□ 2.13
HMGA2-208ENST00000537429 TPCN1Q9ULQ1 816 aa28.37■■■□□ 2.13
HMGA2-208ENST00000537429 USP14P54578 494 aa28.36■■■□□ 2.13
HMGA2-208ENST00000537429 MKRN3Q13064 507 aaKnown RBP28.36■■■□□ 2.13
HMGA2-208ENST00000537429 ZYXQ15942 572 aaKnown RBP28.36■■■□□ 2.13
HMGA2-208ENST00000537429 SH3D19Q5HYK7 790 aa28.36■■■□□ 2.13
HMGA2-208ENST00000537429 SPRYD7Q5W111 196 aa28.36■■■□□ 2.13
HMGA2-208ENST00000537429 ZNF274Q96GC6 653 aaPredicted RBP28.36■■■□□ 2.13
HMGA2-208ENST00000537429 GOPCQ9HD26 462 aa28.36■■■□□ 2.13
HMGA2-208ENST00000537429 RAD21O60216 631 aa28.35■■■□□ 2.13
HMGA2-208ENST00000537429 DDAH1O94760 285 aa28.35■■■□□ 2.13
HMGA2-208ENST00000537429 ZBTB48P10074 688 aaPredicted RBP28.35■■■□□ 2.13
HMGA2-208ENST00000537429 MCM2P49736 904 aa28.35■■■□□ 2.13
HMGA2-208ENST00000537429 KIAA1755Q5JYT7 1200 aa28.35■■■□□ 2.13
HMGA2-208ENST00000537429 SYNE3Q6ZMZ3 975 aa28.35■■■□□ 2.13
HMGA2-208ENST00000537429 NOL8Q76FK4 1167 aaKnown RBP28.35■■■□□ 2.13
HMGA2-208ENST00000537429 RASAL3Q86YV0 1011 aa28.35■■■□□ 2.13
HMGA2-208ENST00000537429 MYL10Q9BUA6 226 aa28.35■■■□□ 2.13
HMGA2-208ENST00000537429 EMILIN3Q9NT22 766 aa28.35■■■□□ 2.13
HMGA2-208ENST00000537429 LIMCH1Q9UPQ0 1083 aa28.35■■■□□ 2.13
HMGA2-208ENST00000537429 PTPRFP10586 1907 aa28.35■■■□□ 2.13
HMGA2-208ENST00000537429 NDUFB10O96000 172 aa28.34■■■□□ 2.13
HMGA2-208ENST00000537429 PDIA3P30101 505 aaKnown RBP28.34■■■□□ 2.13
HMGA2-208ENST00000537429 C1QTNF8P60827 252 aa28.34■■■□□ 2.13
HMGA2-208ENST00000537429 GRM1Q13255 1194 aa28.34■■■□□ 2.13
HMGA2-208ENST00000537429 USP17L2Q6R6M4 530 aa28.34■■■□□ 2.13
HMGA2-208ENST00000537429 ZBTB43O43298 467 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 SNHG28P0DPA3 235 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 PDHBP11177 359 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 RCAN1P53805 252 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 DGKZQ13574 1117 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 SLFN13Q68D06 897 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 SNX21Q969T3 373 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 C12orf42Q96LP6 360 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 A0A0G2JLL6 359 aaPredicted RBP28.33■■■□□ 2.13
HMGA2-208ENST00000537429 CALM1P0DP23 149 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 CALM2P0DP24 149 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 CALM3P0DP25 149 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 HMGCS2P54868 508 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 DEFB115Q30KQ5 88 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 RASGRP2Q7LDG7 609 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 PRRT2Q7Z6L0 340 aaPredicted RBP28.33■■■□□ 2.13
HMGA2-208ENST00000537429 LPAR1Q92633 364 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 GMCL1Q96IK5 515 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 MAP3K14Q99558 947 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 HPS5Q9UPZ3 1129 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 MTMR7Q9Y216 660 aa28.33■■■□□ 2.13
HMGA2-208ENST00000537429 RASSF10A6NK89 507 aa28.32■■■□□ 2.12
HMGA2-208ENST00000537429 SLC10A3P09131 477 aa28.32■■■□□ 2.12
HMGA2-208ENST00000537429 RXRAP19793 462 aa28.32■■■□□ 2.12
HMGA2-208ENST00000537429 ME3Q16798 604 aa28.32■■■□□ 2.12
HMGA2-208ENST00000537429 MICU3Q86XE3 530 aa28.32■■■□□ 2.12
HMGA2-208ENST00000537429 RAB11FIP4Q86YS3 637 aa28.32■■■□□ 2.12
HMGA2-208ENST00000537429 SPICE1Q8N0Z3 855 aa28.32■■■□□ 2.12
HMGA2-208ENST00000537429 NUP133Q8WUM0 1156 aa28.32■■■□□ 2.12
HMGA2-208ENST00000537429 CCDC102AQ96A19 550 aa28.32■■■□□ 2.12
HMGA2-208ENST00000537429 NAP1L2Q9ULW6 460 aaPredicted RBP28.32■■■□□ 2.12
HMGA2-208ENST00000537429 GOLGA8BA8MQT2 603 aa28.31■■■□□ 2.12
HMGA2-208ENST00000537429 FAM155AB1AL88 458 aaPredicted RBP28.31■■■□□ 2.12
HMGA2-208ENST00000537429 SNAPC2Q13487 334 aa28.31■■■□□ 2.12
HMGA2-208ENST00000537429 DCAF4Q8WV16 495 aa28.31■■■□□ 2.12
HMGA2-208ENST00000537429 MS4A4AQ96JQ5 239 aa28.31■■■□□ 2.12
HMGA2-208ENST00000537429 LARGE1O95461 756 aa28.3■■■□□ 2.12
HMGA2-208ENST00000537429 HTRA3P83110 453 aa28.3■■■□□ 2.12
HMGA2-208ENST00000537429 FANCBQ8NB91 859 aa28.3■■■□□ 2.12
HMGA2-208ENST00000537429 CHMP4CQ96CF2 233 aa28.3■■■□□ 2.12
HMGA2-208ENST00000537429 TMOD4Q9NZQ9 345 aa28.3■■■□□ 2.12
HMGA2-208ENST00000537429 NID2Q14112 1375 aa28.3■■■□□ 2.12
HMGA2-208ENST00000537429 SLC1A4P43007 532 aa28.29■■■□□ 2.12
HMGA2-208ENST00000537429 GTF2A2P52657 109 aa28.29■■■□□ 2.12
HMGA2-208ENST00000537429 MOGSQ13724 837 aa28.29■■■□□ 2.12
HMGA2-208ENST00000537429 GRM4Q14833 912 aa28.29■■■□□ 2.12
HMGA2-208ENST00000537429 CYP4F22Q6NT55 531 aa28.29■■■□□ 2.12
HMGA2-208ENST00000537429 ZSCAN31Q96LW9 406 aaPredicted RBP28.29■■■□□ 2.12
HMGA2-208ENST00000537429 WDR46O15213 610 aaKnown RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms