RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ANKRD2Q9GZV1 360 aa18.22■□□□□ 0.51
CHMP1A-202ENST00000535997 PARP3Q9Y6F1 533 aa18.22■□□□□ 0.51
CHMP1A-202ENST00000535997 A0A1B0GUL6 1792 aa18.22■□□□□ 0.51
CHMP1A-202ENST00000535997 DLEC1Q9Y238 1755 aa18.22■□□□□ 0.51
CHMP1A-202ENST00000535997 AKR1B15C9JRZ8 316 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 KCNQ2O43526 872 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 SCG2P13521 617 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 GABPB1Q06547 395 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 CDKAL1Q5VV42 579 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 ARPP21Q9UBL0 812 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 TAF1P21675 1872 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 EFCAB8A8MWE9 144 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 PPP1R3GB7ZBB8 358 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 WNT7AO00755 349 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 FANCGO15287 622 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 TPM1P09493 284 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 CD44P16070 742 aaKnown RBP18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 NT5C2P49902 561 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 PFKFB3Q16875 520 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 LRRN4CLQ8ND94 238 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 MNS1Q8NEH6 495 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 NLRP3Q96P20 1036 aa18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 NAA15Q9BXJ9 866 aaKnown RBP18.21■□□□□ 0.51
CHMP1A-202ENST00000535997 ZBTB22O15209 634 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 NLRP5P59047 1200 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 GNG11P61952 73 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 ARHGAP29Q52LW3 1261 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 LINC00116Q8NCU8 138 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 NYXQ9GZU5 481 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 ADD3Q9UEY8 706 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 SYNRGQ9UMZ2 1314 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 CASQ1P31415 396 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 KIF5BP33176 963 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 MAP3K9P80192 1104 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 FILIP1LQ4L180 1135 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 KLHL10Q6JEL2 608 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 TOGARAM2Q6ZUX3 1019 aa18.2■□□□□ 0.5
CHMP1A-202ENST00000535997 TEX33O43247 280 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 NMT2O60551 498 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 PBX1P40424 430 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 BMS1Q14692 1282 aaKnown RBP18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 E2F4Q16254 413 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 NOM1Q5C9Z4 860 aaKnown RBP18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 FAM47AQ5JRC9 791 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 BICDL1Q6ZP65 573 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 PPFIBP1Q86W92 1011 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 ZNF446Q9NWS9 450 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 COL5A3P25940 1745 aaPredicted RBP18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 BAZ2BQ9UIF8 2168 aaKnown RBP18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 LRRC10BA6NIK2 292 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 CALML3P27482 149 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 TBC1D9BQ66K14 1250 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 ARL6IP4Q66PJ3 421 aaKnown RBP18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 PIK3AP1Q6ZUJ8 805 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 IGSF22Q8N9C0 903 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 SCN7AQ01118 1682 aa18.19■□□□□ 0.5
CHMP1A-202ENST00000535997 TSPY2A6NKD2 308 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 IGSF3O75054 1194 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 TADA3O75528 432 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 KIF20AO95235 890 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 KLRK1P26718 216 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 CASP1P29466 404 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 STX17P56962 302 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 FAM177A1Q8N128 213 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 ARGLU1Q9NWB6 273 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 CCDC175P0C221 793 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 WDR24Q96S15 920 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 SETDB2Q96T68 719 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 SH3GLB2Q9NR46 395 aa18.18■□□□□ 0.5
CHMP1A-202ENST00000535997 CNTNAP4Q9C0A0 1308 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 ZNF831Q5JPB2 1677 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 NRAPQ86VF7 1730 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 PRDX5P30044 214 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 CLCN6P51797 869 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 EVX2Q03828 476 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 RBL2Q08999 1139 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 SPTY2D1Q68D10 685 aaPredicted RBP18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 RCSD1Q6JBY9 416 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 PDXDC2PQ6P474 469 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 DGKHQ86XP1 1220 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 CARD6Q9BX69 1037 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 TFCP2L1Q9NZI6 479 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 MYH13Q9UKX3 1938 aa18.17■□□□□ 0.5
CHMP1A-202ENST00000535997 GTPBP6O43824 516 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-202ENST00000535997 LONP1P36776 959 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-202ENST00000535997 NARFQ9UHQ1 456 aa18.16■□□□□ 0.5
CHMP1A-202ENST00000535997 XDHP47989 1333 aa18.16■□□□□ 0.5
CHMP1A-202ENST00000535997 MCM7P33993 719 aa18.16■□□□□ 0.5
CHMP1A-202ENST00000535997 SMYD4Q8IYR2 804 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-202ENST00000535997 ANKS1AQ92625 1134 aa18.16■□□□□ 0.5
CHMP1A-202ENST00000535997 CCDC51Q96ER9 411 aa18.16■□□□□ 0.5
CHMP1A-202ENST00000535997 RWDD2AQ9UIY3 292 aa18.16■□□□□ 0.5
CHMP1A-202ENST00000535997 ITIH6Q6UXX5 1313 aa18.16■□□□□ 0.5
CHMP1A-202ENST00000535997 IL17AQ16552 155 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 TPTE2Q6XPS3 522 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 NBPF5PQ86XG9 351 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 CNGA4Q8IV77 575 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 KAT14Q9H8E8 782 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 RMND1Q9NWS8 449 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 MCM9Q9NXL9 1143 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms