RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-202ENST00000535689 MCF2L2Q86YR7 1114 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 FBXO27Q8NI29 283 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 FBLIM1Q8WUP2 373 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 ARAP3Q8WWN8 1544 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 PCF11O94913 1555 aaKnown RBP4.86□□□□□ -1.63
SNHG1-202ENST00000535689 ADAMTSL3P82987 1691 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 IQCA1LA6NCM1 817 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 CLEC3AO75596 197 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 NFICP08651 508 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 DOC2BQ14184 412 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 TCEAL1Q15170 157 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 ARSHQ5FYA8 562 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 TAF7LQ5H9L4 462 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 MPRIPQ6WCQ1 1025 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 CRACR2BQ8N4Y2 399 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-202ENST00000535689 ACSF2Q96CM8 615 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-202ENST00000535689 ATG4CQ96DT6 458 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 MRFAP1L1Q96HT8 127 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 SHDQ96IW2 340 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 TBC1D32Q96NH3 1257 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 UBL7Q96S82 380 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-202ENST00000535689 ASPNQ9BXN1 380 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 EPN3Q9H201 632 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 SEMA6CQ9H3T2 930 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 MKNK2Q9HBH9 465 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 CWC22Q9HCG8 908 aaKnown RBP4.85□□□□□ -1.63
SNHG1-202ENST00000535689 PRDM10Q9NQV6 1147 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 TJP2Q9UDY2 1190 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 TPX2Q9ULW0 747 aaKnown RBP4.85□□□□□ -1.63
SNHG1-202ENST00000535689 PPT2Q9UMR5 302 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 CEP131Q9UPN4 1083 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 POLR3KQ9Y2Y1 108 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-202ENST00000535689 KIF27Q86VH2 1401 aa4.85□□□□□ -1.63
SNHG1-202ENST00000535689 KIF21BO75037 1637 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 ZCCHC11Q5TAX3 1644 aaKnown RBP4.84□□□□□ -1.63
SNHG1-202ENST00000535689 WDR7Q9Y4E6 1490 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 CARMIL1Q5VZK9 1371 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 GNAT3A8MTJ3 354 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 IGF2BP3O00425 579 aaKnown RBP eCLIP4.84□□□□□ -1.63
SNHG1-202ENST00000535689 ENDOUP21128 410 aaKnown RBP4.84□□□□□ -1.63
SNHG1-202ENST00000535689 GRIK1P39086 918 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 IFRD2Q12894 506 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-202ENST00000535689 SGO2Q562F6 1265 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 RNF43Q68DV7 783 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 CDPF1Q6NVV7 123 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 LETMD1Q6P1Q0 360 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 OGFOD3Q6PK18 319 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 PRR23CQ6ZRP0 262 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 ANKS3Q6ZW76 656 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 ARMCX6Q7L4S7 300 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 NOP9Q86U38 636 aaKnown RBP4.84□□□□□ -1.63
SNHG1-202ENST00000535689 SYTL4Q96C24 671 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-202ENST00000535689 MEGF10Q96KG7 1140 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 DBNDD2Q9BQY9 259 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 OSBPL1AQ9BXW6 950 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 ZNF408Q9H9D4 720 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 PRDM5Q9NQX1 630 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-202ENST00000535689 MAPK8IP1Q9UQF2 711 aa4.84□□□□□ -1.63
SNHG1-202ENST00000535689 BCORL1Q5H9F3 1711 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 SLC7A5Q01650 507 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 RAB33AQ14088 237 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 SFRP5Q5T4F7 317 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 PRAMEF13Q5VWM6 474 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 OVOS1Q6IE37 1185 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 LSRQ86X29 649 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-202ENST00000535689 ARMC10Q8N2F6 343 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 ZNF669Q96BR6 464 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-202ENST00000535689 MIPEPQ99797 713 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 GBP3Q9H0R5 595 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 TRIT1Q9H3H1 467 aaKnown RBP4.83□□□□□ -1.64
SNHG1-202ENST00000535689 PRR13Q9NZ81 148 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 CORINQ9Y5Q5 1042 aa4.83□□□□□ -1.64
SNHG1-202ENST00000535689 IQGAP2Q13576 1575 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 YEATS2Q9ULM3 1422 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 DDAH1O94760 285 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 SLBPQ14493 270 aaKnown RBP eCLIP4.82□□□□□ -1.642e-8■□□□□ 9.6
SNHG1-202ENST00000535689 ZC3H12BQ5HYM0 836 aaKnown RBP4.82□□□□□ -1.64
SNHG1-202ENST00000535689 INTS5Q6P9B9 1019 aaKnown RBP4.82□□□□□ -1.64
SNHG1-202ENST00000535689 POMZP3Q6PJE2 187 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 CCDC81Q6ZN84 652 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 EEPD1Q7L9B9 569 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 ZAR1Q86SH2 424 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 PIWIL2Q8TC59 973 aaKnown RBP4.82□□□□□ -1.64
SNHG1-202ENST00000535689 ENOX1Q8TC92 643 aaKnown RBP4.82□□□□□ -1.64
SNHG1-202ENST00000535689 RNF141Q8WVD5 230 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 DHX38Q92620 1227 aaKnown RBP4.82□□□□□ -1.64
SNHG1-202ENST00000535689 FBXL18Q96ME1 805 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 IPO9Q96P70 1041 aaKnown RBP4.82□□□□□ -1.64
SNHG1-202ENST00000535689 SSBP4Q9BWG4 385 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-202ENST00000535689 CCDC113Q9H0I3 377 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 OSBPL2Q9H1P3 480 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 TMX1Q9H3N1 280 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 MRVI1Q9Y6F6 885 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 SPATA31D1Q6ZQQ2 1576 aa4.82□□□□□ -1.64
SNHG1-202ENST00000535689 IQSEC2Q5JU85 1478 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 CHURC1-FNTBB4DL54 471 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 SMAD7O15105 426 aaKnown RBP4.81□□□□□ -1.64
SNHG1-202ENST00000535689 ADAM23O75077 832 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 IGLV1-40P01703 118 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms