RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 OSBP2Q969R2 916 aa16.06■□□□□ 0.16
CAPN1-228ENST00000534373 CWC22Q9HCG8 908 aaKnown RBP16.06■□□□□ 0.16
CAPN1-228ENST00000534373 ZBTB47Q9UFB7 747 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-228ENST00000534373 CYP2D7A0A087X1C5 515 aa16.05■□□□□ 0.16
CAPN1-228ENST00000534373 FARP2O94887 1054 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-228ENST00000534373 MAP3K21Q5TCX8 1036 aa16.05■□□□□ 0.16
CAPN1-228ENST00000534373 PI4K2BQ8TCG2 481 aa16.05■□□□□ 0.16
CAPN1-228ENST00000534373 TRIB2Q92519 343 aa16.05■□□□□ 0.16
CAPN1-228ENST00000534373 VCPKMTQ9H867 229 aa16.05■□□□□ 0.16
CAPN1-228ENST00000534373 BTBD7Q9P203 1132 aa16.05■□□□□ 0.16
CAPN1-228ENST00000534373 BAZ2AQ9UIF9 1905 aaKnown RBP16.04■□□□□ 0.16
CAPN1-228ENST00000534373 SLC15A5A6NIM6 579 aa16.04■□□□□ 0.16
CAPN1-228ENST00000534373 PATL2C9JE40 543 aaKnown RBP16.04■□□□□ 0.16
CAPN1-228ENST00000534373 GPAA1O43292 621 aa16.04■□□□□ 0.16
CAPN1-228ENST00000534373 STRNO43815 780 aa16.04■□□□□ 0.16
CAPN1-228ENST00000534373 MX1P20591 662 aa16.04■□□□□ 0.16
CAPN1-228ENST00000534373 MAP2K5Q13163 448 aa16.04■□□□□ 0.16
CAPN1-228ENST00000534373 HDAC1Q13547 482 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-228ENST00000534373 TSHZ3Q63HK5 1081 aa16.04■□□□□ 0.16
CAPN1-228ENST00000534373 DPF3Q92784 378 aa16.04■□□□□ 0.16
CAPN1-228ENST00000534373 APBA2Q99767 749 aa16.04■□□□□ 0.16
CAPN1-228ENST00000534373 ZNF287Q9HBT7 754 aa16.04■□□□□ 0.16
CAPN1-228ENST00000534373 IVNS1ABPQ9Y6Y0 642 aa16.04■□□□□ 0.16
CAPN1-228ENST00000534373 PLXNB2O15031 1838 aa16.03■□□□□ 0.16
CAPN1-228ENST00000534373 WDR46O15213 610 aaKnown RBP16.03■□□□□ 0.16
CAPN1-228ENST00000534373 HOXC6P09630 235 aa16.03■□□□□ 0.16
CAPN1-228ENST00000534373 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-228ENST00000534373 PTPREP23469 700 aa16.03■□□□□ 0.16
CAPN1-228ENST00000534373 DSG3P32926 999 aa16.03■□□□□ 0.16
CAPN1-228ENST00000534373 SHCBP1Q8NEM2 672 aa16.03■□□□□ 0.16
CAPN1-228ENST00000534373 CRBNQ96SW2 442 aa16.03■□□□□ 0.16
CAPN1-228ENST00000534373 TANGO6Q9C0B7 1094 aa16.03■□□□□ 0.16
CAPN1-228ENST00000534373 MKNK2Q9HBH9 465 aa16.03■□□□□ 0.16
CAPN1-228ENST00000534373 ROBO3Q96MS0 1386 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 SMIM22K7EJ46 135 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 EEF2P13639 858 aaKnown RBP16.02■□□□□ 0.16
CAPN1-228ENST00000534373 GRB14Q14449 540 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 KIAA1755Q5JYT7 1200 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 NECAB2Q7Z6G3 386 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 TICAM2Q86XR7 235 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 NACAP1Q9BZK3 213 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 GOPCQ9HD26 462 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 OGDHLQ9ULD0 1010 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 NR2E3Q9Y5X4 410 aa16.02■□□□□ 0.16
CAPN1-228ENST00000534373 MYH8P13535 1937 aa16.02■□□□□ 0.15
CAPN1-228ENST00000534373 SALL3Q9BXA9 1300 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 MINDY4BA8MYZ0 360 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 H0YGN5 161 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 FLOT1O75955 427 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 APPP05067 770 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
CAPN1-228ENST00000534373 CACNB2Q08289 660 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-228ENST00000534373 TRIM32Q13049 653 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 HABP4Q5JVS0 413 aaKnown RBP16.01■□□□□ 0.15
CAPN1-228ENST00000534373 IFNL3Q8IZI9 196 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 FSD1Q9BTV5 496 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 SPATC1LQ9H0A9 340 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 MROH8Q9H579 483 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 NYAP2Q9P242 653 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 STAP2Q9UGK3 403 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 ADAMTS5Q9UNA0 930 aa16.01■□□□□ 0.15
CAPN1-228ENST00000534373 M0R2C6 588 aa16■□□□□ 0.15
CAPN1-228ENST00000534373 RASA1P20936 1047 aa16■□□□□ 0.15
CAPN1-228ENST00000534373 TDO2P48775 406 aa16■□□□□ 0.15
CAPN1-228ENST00000534373 ZMYM1Q5SVZ6 1142 aa16■□□□□ 0.15
CAPN1-228ENST00000534373 WDR78Q5VTH9 848 aa16■□□□□ 0.15
CAPN1-228ENST00000534373 MFSD14CQ5VZR4 134 aa16■□□□□ 0.15
CAPN1-228ENST00000534373 ZNF444Q8N0Y2 327 aaPredicted RBP16■□□□□ 0.15
CAPN1-228ENST00000534373 ABRAQ8N0Z2 381 aa16■□□□□ 0.15
CAPN1-228ENST00000534373 SPICE1Q8N0Z3 855 aa16■□□□□ 0.15
CAPN1-228ENST00000534373 OTUD7AQ8TE49 926 aaPredicted RBP16■□□□□ 0.15
CAPN1-228ENST00000534373 PAWRQ96IZ0 340 aaKnown RBP16■□□□□ 0.15
CAPN1-228ENST00000534373 GNL3Q9BVP2 549 aaKnown RBP eCLIP16■□□□□ 0.15
CAPN1-228ENST00000534373 MOV10L1Q9BXT6 1211 aaKnown RBP16■□□□□ 0.15
CAPN1-228ENST00000534373 SYNPO2Q9UMS6 1093 aa16■□□□□ 0.15
CAPN1-228ENST00000534373 SLC25A27O95847 323 aa15.99■□□□□ 0.15
CAPN1-228ENST00000534373 ATP2B2Q01814 1243 aa15.99■□□□□ 0.15
CAPN1-228ENST00000534373 CCL14Q16627 93 aa15.99■□□□□ 0.15
CAPN1-228ENST00000534373 CLEC10AQ8IUN9 316 aa15.99■□□□□ 0.15
CAPN1-228ENST00000534373 EVI5LQ96CN4 794 aa15.99■□□□□ 0.15
CAPN1-228ENST00000534373 NBPF3Q9H094 633 aa15.99■□□□□ 0.15
CAPN1-228ENST00000534373 EPB41L4AQ9HCS5 686 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-228ENST00000534373 SLC5A4Q9NY91 659 aa15.99■□□□□ 0.15
CAPN1-228ENST00000534373 EVI5O60447 810 aa15.98■□□□□ 0.15
CAPN1-228ENST00000534373 SLC3A2P08195 630 aaKnown RBP15.98■□□□□ 0.15
CAPN1-228ENST00000534373 ERCC3P19447 782 aa15.98■□□□□ 0.15
CAPN1-228ENST00000534373 DPP9Q86TI2 863 aa15.98■□□□□ 0.15
CAPN1-228ENST00000534373 MKL1Q969V6 931 aa15.98■□□□□ 0.15
CAPN1-228ENST00000534373 ATG4CQ96DT6 458 aa15.98■□□□□ 0.15
CAPN1-228ENST00000534373 RLFQ13129 1914 aa15.98■□□□□ 0.15
CAPN1-228ENST00000534373 MSCO60682 206 aa15.97■□□□□ 0.15
CAPN1-228ENST00000534373 IGHA2P01877 340 aa15.97■□□□□ 0.15
CAPN1-228ENST00000534373 PDE1AP54750 535 aa15.97■□□□□ 0.15
CAPN1-228ENST00000534373 PDE4BQ07343 736 aa15.97■□□□□ 0.15
CAPN1-228ENST00000534373 OLFML2BQ68BL8 750 aa15.97■□□□□ 0.15
CAPN1-228ENST00000534373 LHX8Q68G74 356 aa15.97■□□□□ 0.15
CAPN1-228ENST00000534373 YTHDC1Q96MU7 727 aaKnown RBP15.97■□□□□ 0.15
CAPN1-228ENST00000534373 SEC62Q99442 399 aaKnown RBP15.97■□□□□ 0.15
CAPN1-228ENST00000534373 NAPBQ9H115 298 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms