RNA–Protein interactions for RNA: ENST00000533188.1

CSRP1-217, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-217ENST00000533188 ZNF444Q8N0Y2 327 aaPredicted RBP17.22■□□□□ 0.35
CSRP1-217ENST00000533188 STAG1Q8WVM7 1258 aa17.22■□□□□ 0.35
CSRP1-217ENST00000533188 CEP95Q96GE4 821 aa17.22■□□□□ 0.35
CSRP1-217ENST00000533188 ARHGEF10LQ9HCE6 1279 aa17.22■□□□□ 0.35
CSRP1-217ENST00000533188 TOMM22Q9NS69 142 aa17.22■□□□□ 0.35
CSRP1-217ENST00000533188 ZNF213O14771 459 aa17.21■□□□□ 0.35
CSRP1-217ENST00000533188 NMT2O60551 498 aa17.21■□□□□ 0.35
CSRP1-217ENST00000533188 FGRP09769 529 aa17.21■□□□□ 0.35
CSRP1-217ENST00000533188 VCAM1P19320 739 aa17.21■□□□□ 0.35
CSRP1-217ENST00000533188 TFAP4Q01664 338 aa17.21■□□□□ 0.35
CSRP1-217ENST00000533188 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
CSRP1-217ENST00000533188 PRPF38BQ5VTL8 546 aaKnown RBP17.21■□□□□ 0.35
CSRP1-217ENST00000533188 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
CSRP1-217ENST00000533188 PARK7Q99497 189 aaKnown RBP17.21■□□□□ 0.35
CSRP1-217ENST00000533188 LSG1Q9H089 658 aaKnown RBP17.21■□□□□ 0.35
CSRP1-217ENST00000533188 KANSL2Q9H9L4 492 aa17.21■□□□□ 0.35
CSRP1-217ENST00000533188 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.35
CSRP1-217ENST00000533188 TAF6LQ9Y6J9 622 aa17.21■□□□□ 0.35
CSRP1-217ENST00000533188 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
CSRP1-217ENST00000533188 TSPY2A6NKD2 308 aa17.2■□□□□ 0.34
CSRP1-217ENST00000533188 RANBP6O60518 1105 aaKnown RBP17.2■□□□□ 0.34
CSRP1-217ENST00000533188 BCRP11274 1271 aa17.2■□□□□ 0.34
CSRP1-217ENST00000533188 EN2P19622 333 aaPredicted RBP17.2■□□□□ 0.34
CSRP1-217ENST00000533188 ARHGEF6Q15052 776 aa17.2■□□□□ 0.34
CSRP1-217ENST00000533188 IMMTQ16891 758 aaKnown RBP17.2■□□□□ 0.34
CSRP1-217ENST00000533188 NEDD1Q8NHV4 660 aa17.2■□□□□ 0.34
CSRP1-217ENST00000533188 ANO2Q9NQ90 1003 aa17.2■□□□□ 0.34
CSRP1-217ENST00000533188 CTNNA3Q9UI47 895 aa17.2■□□□□ 0.34
CSRP1-217ENST00000533188 TMX2Q9Y320 296 aa17.2■□□□□ 0.34
CSRP1-217ENST00000533188 RBM8AQ9Y5S9 174 aaKnown RBP17.2■□□□□ 0.34
CSRP1-217ENST00000533188 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
CSRP1-217ENST00000533188 USP14P54578 494 aa17.19■□□□□ 0.34
CSRP1-217ENST00000533188 SLC9C1Q4G0N8 1177 aa17.19■□□□□ 0.34
CSRP1-217ENST00000533188 CASC1Q6TDU7 716 aa17.19■□□□□ 0.34
CSRP1-217ENST00000533188 SPICE1Q8N0Z3 855 aa17.19■□□□□ 0.34
CSRP1-217ENST00000533188 LRRC47Q8N1G4 583 aaKnown RBP17.19■□□□□ 0.34
CSRP1-217ENST00000533188 TRIM47Q96LD4 638 aa17.19■□□□□ 0.34
CSRP1-217ENST00000533188 ASCC2Q9H1I8 757 aaPredicted RBP17.19■□□□□ 0.34
CSRP1-217ENST00000533188 MTMR4Q9NYA4 1195 aa17.19■□□□□ 0.34
CSRP1-217ENST00000533188 ECM2O94769 699 aaPredicted RBP17.18■□□□□ 0.34
CSRP1-217ENST00000533188 GNRH1P01148 92 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 CYP21A2P08686 494 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 PSMC4P43686 418 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 KIF22Q14807 665 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 MFSD6Q6ZSS7 791 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 SH3TC2Q8TF17 1288 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 RNF41Q9H4P4 317 aaPredicted RBP17.18■□□□□ 0.34
CSRP1-217ENST00000533188 RPAP3Q9H6T3 665 aaPredicted RBP17.18■□□□□ 0.34
CSRP1-217ENST00000533188 SH2D4AQ9H788 454 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 VCPKMTQ9H867 229 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 IL17RBQ9NRM6 502 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 NYAP2Q9P242 653 aa17.18■□□□□ 0.34
CSRP1-217ENST00000533188 OSBPP22059 807 aa17.17■□□□□ 0.34
CSRP1-217ENST00000533188 RANBP2P49792 3224 aaKnown RBP17.17■□□□□ 0.34
CSRP1-217ENST00000533188 IRX3P78415 501 aaPredicted RBP17.17■□□□□ 0.34
CSRP1-217ENST00000533188 PABPC4Q13310 644 aaKnown RBP eCLIP17.17■□□□□ 0.34
CSRP1-217ENST00000533188 KIAA1211Q6ZU35 1233 aa17.17■□□□□ 0.34
CSRP1-217ENST00000533188 SMCR8Q8TEV9 937 aaPredicted RBP17.17■□□□□ 0.34
CSRP1-217ENST00000533188 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
CSRP1-217ENST00000533188 SRRDQ9UH36 339 aa17.17■□□□□ 0.34
CSRP1-217ENST00000533188 PNMA3Q9UL41 463 aa17.17■□□□□ 0.34
CSRP1-217ENST00000533188 B4E1Z4 1266 aa17.16■□□□□ 0.34
CSRP1-217ENST00000533188 RAD21O60216 631 aa17.16■□□□□ 0.34
CSRP1-217ENST00000533188 KDM4AO75164 1064 aa17.16■□□□□ 0.34
CSRP1-217ENST00000533188 TTLL1O95922 423 aa17.16■□□□□ 0.34
CSRP1-217ENST00000533188 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
CSRP1-217ENST00000533188 HOXA7P31268 230 aaPredicted RBP17.16■□□□□ 0.34
CSRP1-217ENST00000533188 PRMT2P55345 433 aa17.16■□□□□ 0.34
CSRP1-217ENST00000533188 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
CSRP1-217ENST00000533188 RASGRP2Q7LDG7 609 aa17.16■□□□□ 0.34
CSRP1-217ENST00000533188 NBPF11Q86T75 865 aa17.16■□□□□ 0.34
CSRP1-217ENST00000533188 TANGO6Q9C0B7 1094 aa17.16■□□□□ 0.34
CSRP1-217ENST00000533188 PEX10O60683 326 aa17.15■□□□□ 0.34
CSRP1-217ENST00000533188 HERVK_113P62684 666 aa17.15■□□□□ 0.34
CSRP1-217ENST00000533188 POTEEQ6S8J3 1075 aa17.15■□□□□ 0.34
CSRP1-217ENST00000533188 LPAR1Q92633 364 aa17.15■□□□□ 0.34
CSRP1-217ENST00000533188 ESR2Q92731 530 aa17.15■□□□□ 0.34
CSRP1-217ENST00000533188 NUP88Q99567 741 aaPredicted RBP17.15■□□□□ 0.34
CSRP1-217ENST00000533188 ZKSCAN3Q9BRR0 538 aa17.15■□□□□ 0.34
CSRP1-217ENST00000533188 TMEM106CQ9BVX2 250 aa17.15■□□□□ 0.34
CSRP1-217ENST00000533188 GOPCQ9HD26 462 aa17.15■□□□□ 0.34
CSRP1-217ENST00000533188 STX8Q9UNK0 236 aa17.15■□□□□ 0.34
CSRP1-217ENST00000533188 USP17L15C9J2P7 530 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 USP17L13C9JLJ4 530 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 USP17L11C9JVI0 530 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 USP17L18D6R9N7 530 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 USP17L22D6RA61 530 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 USP17L17D6RBQ6 530 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 USP17L19D6RCP7 530 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 USP17L20D6RJB6 530 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 NDUFB10O96000 172 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 USP17L24Q0WX57 530 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 ANKRD13CQ8N6S4 541 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 P2RX7Q99572 595 aaKnown RBP17.14■□□□□ 0.33
CSRP1-217ENST00000533188 PLXNB2O15031 1838 aa17.14■□□□□ 0.33
CSRP1-217ENST00000533188 SLC27A2O14975 620 aa17.13■□□□□ 0.33
CSRP1-217ENST00000533188 WDR46O15213 610 aaKnown RBP17.13■□□□□ 0.33
CSRP1-217ENST00000533188 FMNL1O95466 1100 aaPredicted RBP17.13■□□□□ 0.33
CSRP1-217ENST00000533188 MYCP01106 439 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms