RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 ZSWIM8A7E2V4 1837 aa13.81□□□□□ -0.2
ACER3-210ENST00000531352 B4E1Z4 1266 aa13.81□□□□□ -0.2
ACER3-210ENST00000531352 HOXA7P31268 230 aaPredicted RBP13.81□□□□□ -0.2
ACER3-210ENST00000531352 C17orf99Q6UX52 265 aa13.81□□□□□ -0.2
ACER3-210ENST00000531352 VCPKMTQ9H867 229 aa13.81□□□□□ -0.2
ACER3-210ENST00000531352 SLC45A1Q9Y2W3 748 aa13.81□□□□□ -0.2
ACER3-210ENST00000531352 KDM4AO75164 1064 aa13.8□□□□□ -0.2
ACER3-210ENST00000531352 USP14P54578 494 aa13.8□□□□□ -0.2
ACER3-210ENST00000531352 NECTIN1Q15223 517 aa13.8□□□□□ -0.2
ACER3-210ENST00000531352 LRRC47Q8N1G4 583 aaKnown RBP13.8□□□□□ -0.2
ACER3-210ENST00000531352 MKL1Q969V6 931 aa13.8□□□□□ -0.2
ACER3-210ENST00000531352 P2RX7Q99572 595 aaKnown RBP13.8□□□□□ -0.2
ACER3-210ENST00000531352 ZKSCAN3Q9BRR0 538 aa13.8□□□□□ -0.2
ACER3-210ENST00000531352 ZSWIM5Q9P217 1185 aa13.8□□□□□ -0.2
ACER3-210ENST00000531352 ECM2O94769 699 aaPredicted RBP13.79□□□□□ -0.2
ACER3-210ENST00000531352 NOVP48745 357 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 CASC1Q6TDU7 716 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 RNF41Q9H4P4 317 aaPredicted RBP13.79□□□□□ -0.2
ACER3-210ENST00000531352 RPAP3Q9H6T3 665 aaPredicted RBP13.79□□□□□ -0.2
ACER3-210ENST00000531352 PRDM10Q9NQV6 1147 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 STX8Q9UNK0 236 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 PARP14Q460N5 1801 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 E7EWF7 191 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 F5H6K3 240 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 TTLL1O95922 423 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 PCP11498 1178 aaKnown RBP13.79□□□□□ -0.2
ACER3-210ENST00000531352 KLRC3Q07444 240 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 RCSD1Q6JBY9 416 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 CATSPERGQ6ZRH7 1159 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
ACER3-210ENST00000531352 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
ACER3-210ENST00000531352 NUP88Q99567 741 aaPredicted RBP13.79□□□□□ -0.2
ACER3-210ENST00000531352 SLC27A2O14975 620 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 RAD21O60216 631 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 BCRP11274 1271 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 CTGFP29279 349 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 SP3Q02447 781 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 NOM1Q5C9Z4 860 aaKnown RBP13.78□□□□□ -0.2
ACER3-210ENST00000531352 CREB3L3Q68CJ9 461 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 CYB5R4Q7L1T6 521 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 CHST3Q7LGC8 479 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
ACER3-210ENST00000531352 ESR2Q92731 530 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 MKI67P46013 3256 aaKnown RBP13.78□□□□□ -0.2
ACER3-210ENST00000531352 USP17L15C9J2P7 530 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 USP17L13C9JLJ4 530 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 USP17L11C9JVI0 530 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 USP17L18D6R9N7 530 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 USP17L22D6RA61 530 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 USP17L17D6RBQ6 530 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 USP17L19D6RCP7 530 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 USP17L20D6RJB6 530 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 FKTNO75072 461 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 NDUFB10O96000 172 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 HERVK_113P62684 666 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 USP17L24Q0WX57 530 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 C8orf34Q49A92 452 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 ARHGAP39Q9C0H5 1083 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 TXNRD2Q9NNW7 524 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 TCP11L1Q9NUJ3 509 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 FBXO28Q9NVF7 368 aa13.78□□□□□ -0.2
ACER3-210ENST00000531352 IRX3P78415 501 aaPredicted RBP13.77□□□□□ -0.21
ACER3-210ENST00000531352 PABPC4Q13310 644 aaKnown RBP eCLIP13.77□□□□□ -0.21
ACER3-210ENST00000531352 ANKRD13CQ8N6S4 541 aa13.77□□□□□ -0.21
ACER3-210ENST00000531352 CD99L2Q8TCZ2 262 aa13.77□□□□□ -0.21
ACER3-210ENST00000531352 LPAR1Q92633 364 aa13.77□□□□□ -0.21
ACER3-210ENST00000531352 SH2D4AQ9H788 454 aa13.77□□□□□ -0.21
ACER3-210ENST00000531352 RBPJLQ9UBG7 517 aa13.77□□□□□ -0.21
ACER3-210ENST00000531352 PNMA3Q9UL41 463 aa13.77□□□□□ -0.21
ACER3-210ENST00000531352 OSBPP22059 807 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 FAM83BQ5T0W9 1011 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 TMEM47Q9BQJ4 181 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 SENP2Q9HC62 589 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 GOPCQ9HD26 462 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 GPHNQ9NQX3 736 aaPredicted RBP13.76□□□□□ -0.21
ACER3-210ENST00000531352 COL11A1P12107 1806 aaPredicted RBP13.76□□□□□ -0.21
ACER3-210ENST00000531352 Q3C1V9 767 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 ADCK5Q3MIX3 580 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 KRT23Q9C075 422 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 TANGO6Q9C0B7 1094 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 MTMR7Q9Y216 660 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 MGAMO43451 1857 aa13.76□□□□□ -0.21
ACER3-210ENST00000531352 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
ACER3-210ENST00000531352 WDR46O15213 610 aaKnown RBP13.75□□□□□ -0.21
ACER3-210ENST00000531352 CPA1P15085 419 aa13.75□□□□□ -0.21
ACER3-210ENST00000531352 MCCP23508 829 aa13.75□□□□□ -0.21
ACER3-210ENST00000531352 ENAHQ8N8S7 591 aaPredicted RBP13.75□□□□□ -0.21
ACER3-210ENST00000531352 TCEANC2Q96MN5 208 aa13.75□□□□□ -0.21
ACER3-210ENST00000531352 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
ACER3-210ENST00000531352 CNMDO75829 334 aa13.75□□□□□ -0.21
ACER3-210ENST00000531352 ANTXR2P58335 489 aa13.75□□□□□ -0.21
ACER3-210ENST00000531352 LACTBP83111 547 aaPredicted RBP13.75□□□□□ -0.21
ACER3-210ENST00000531352 COG2Q14746 738 aa13.75□□□□□ -0.21
ACER3-210ENST00000531352 SLFN13Q68D06 897 aa13.75□□□□□ -0.21
ACER3-210ENST00000531352 SAMD1Q6SPF0 538 aaPredicted RBP13.75□□□□□ -0.21
ACER3-210ENST00000531352 GMCL1P1Q8NEA9 526 aa13.75□□□□□ -0.21
ACER3-210ENST00000531352 ZSCAN10Q96SZ4 725 aaPredicted RBP13.75□□□□□ -0.21
ACER3-210ENST00000531352 SMCHD1A6NHR9 2005 aa13.74□□□□□ -0.21
ACER3-210ENST00000531352 FLOT1O75955 427 aa13.74□□□□□ -0.21
ACER3-210ENST00000531352 SEC23AQ15436 765 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms