RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 SFMBT2Q5VUG0 894 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 TYW1BQ6NUM6 668 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 PDE11AQ9HCR9 933 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 PLCB1Q9NQ66 1216 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 CTDSPL2Q05D32 466 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 SPATA1Q5VX52 437 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 SUPT20HQ8NEM7 779 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 FBXO18Q8NFZ0 1043 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 CAPS2Q9BXY5 557 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 HYOU1Q9Y4L1 999 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 CAPN7Q9Y6W3 813 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 SHROOM2Q13796 1616 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 PRDM1O75626 825 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 ZNF710Q8N1W2 664 aa17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 CPSF2Q9P2I0 782 aaKnown RBP17.11■□□□□ 0.33
PCDHA4-203ENST00000530339 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 UFL1O94874 794 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 DNM2P50570 870 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 FYB2Q5VWT5 728 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 VSIG1Q86XK7 387 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 C2CD5Q86YS7 1000 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 UNC5CLQ8IV45 518 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 ZMYM6O95789 1325 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 ABCA8O94911 1581 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 IKBKBO14920 756 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 TCP1P17987 556 aaKnown RBP17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 GBP1P32455 592 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 RRAGAQ7L523 313 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 FAM207AQ9NSI2 230 aaPredicted RBP17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 HSPD1P10809 573 aaKnown RBP17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 HSPA2P54652 639 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 MAIP1Q8WWC4 291 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 VPS54Q9P1Q0 977 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 ADCY9O60503 1353 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 SCRN1Q12765 414 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 MORC3Q14149 939 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 ZNF365Q70YC5 407 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 PEX26Q7Z412 305 aa17.1■□□□□ 0.33
PCDHA4-203ENST00000530339 GNPATO15228 680 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 FNBP1Q96RU3 617 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 ZNF496Q96IT1 587 aaPredicted RBP17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 SPTLC3Q9NUV7 552 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 MLH3Q9UHC1 1453 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 PDIA3P30101 505 aaKnown RBP17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 EIF6P56537 245 aaKnown RBP17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 PPP2R5EQ16537 467 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 TSNAXIP1Q2TAA8 658 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 CABP7Q86V35 215 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 SNX29Q8TEQ0 813 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 MAGEF1Q9HAY2 307 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 CIB2O75838 187 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 CIAO1O76071 339 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 ERCC5P28715 1186 aaPredicted RBP17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 ZNF827Q17R98 1081 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 PPANQ9NQ55 473 aaKnown RBP17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 COPRSQ9NQ92 184 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 DNM3Q9UQ16 869 aa17.09■□□□□ 0.33
PCDHA4-203ENST00000530339 H7C1D1 291 aa17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 TAF5LO75529 589 aa17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 HOXA7P31268 230 aaPredicted RBP17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 NEDD9Q14511 834 aa17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 PLS1Q14651 629 aa17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 LONRF2Q1L5Z9 754 aa17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 INF2Q27J81 1249 aa17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 HERC4Q5GLZ8 1057 aaPredicted RBP17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 RBM26Q5T8P6 1007 aaKnown RBP17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 CCDC110Q8TBZ0 833 aa17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 ADD1P35611 737 aaKnown RBP17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 C11orf57Q6ZUT1 292 aaPredicted RBP17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 BAIAP2L1Q9UHR4 511 aa17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 CCNL1Q9UK58 526 aaPredicted RBP17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 CLIC4Q9Y696 253 aa17.08■□□□□ 0.33
PCDHA4-203ENST00000530339 CTSWP56202 376 aa17.08■□□□□ 0.32
PCDHA4-203ENST00000530339 RAB17Q9H0T7 212 aa17.08■□□□□ 0.32
PCDHA4-203ENST00000530339 TXNDC16Q9P2K2 825 aa17.08■□□□□ 0.32
PCDHA4-203ENST00000530339 EPN1Q9Y6I3 576 aaPredicted RBP17.08■□□□□ 0.32
PCDHA4-203ENST00000530339 PPARAQ07869 468 aa17.08■□□□□ 0.32
PCDHA4-203ENST00000530339 CALCRLQ16602 461 aa17.08■□□□□ 0.32
PCDHA4-203ENST00000530339 PCCAP05165 728 aaPredicted RBP17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 CEP85LQ5SZL2 805 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 ZNF654Q8IZM8 581 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 MYO1AQ9UBC5 1043 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 PCDHA5Q9Y5H7 936 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 PRDM15P57071 1507 aaPredicted RBP17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 IWS1Q96ST2 819 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 RCOR1Q9UKL0 485 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 PLEKHG1Q9ULL1 1385 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 ARHGEF35A5YM69 484 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 DDAH1O94760 285 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 DPCR1Q3MIW9 517 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 DYMQ7RTS9 669 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 ATP8A2Q9NTI2 1148 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 MED23Q9ULK4 1368 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 BCRP11274 1271 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms