RNA–Protein interactions for RNA: ENST00000529347.1

CDKL1-206, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 2

Gene CDKL1, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-206ENST00000529347 TMX2Q9Y320 296 aa16.65■□□□□ 0.26
CDKL1-206ENST00000529347 PARP14Q460N5 1801 aa16.64■□□□□ 0.25
CDKL1-206ENST00000529347 ECM2O94769 699 aaPredicted RBP16.64■□□□□ 0.25
CDKL1-206ENST00000529347 IRX3P78415 501 aaPredicted RBP16.64■□□□□ 0.25
CDKL1-206ENST00000529347 PABPC4Q13310 644 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDKL1-206ENST00000529347 STOX1Q6ZVD7 989 aa16.64■□□□□ 0.25
CDKL1-206ENST00000529347 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
CDKL1-206ENST00000529347 PARK7Q99497 189 aaKnown RBP16.64■□□□□ 0.25
CDKL1-206ENST00000529347 TANGO6Q9C0B7 1094 aa16.64■□□□□ 0.25
CDKL1-206ENST00000529347 RPAP3Q9H6T3 665 aaPredicted RBP16.64■□□□□ 0.25
CDKL1-206ENST00000529347 VCPKMTQ9H867 229 aa16.64■□□□□ 0.25
CDKL1-206ENST00000529347 ISY1Q9ULR0 285 aaKnown RBP16.64■□□□□ 0.25
CDKL1-206ENST00000529347 OSBPP22059 807 aa16.63■□□□□ 0.25
CDKL1-206ENST00000529347 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
CDKL1-206ENST00000529347 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
CDKL1-206ENST00000529347 SMCR8Q8TEV9 937 aaPredicted RBP16.63■□□□□ 0.25
CDKL1-206ENST00000529347 C12orf42Q96LP6 360 aa16.63■□□□□ 0.25
CDKL1-206ENST00000529347 ASCC2Q9H1I8 757 aaPredicted RBP16.63■□□□□ 0.25
CDKL1-206ENST00000529347 ZCCHC17Q9NP64 241 aaKnown RBP16.63■□□□□ 0.25
CDKL1-206ENST00000529347 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
CDKL1-206ENST00000529347 CPA4Q9UI42 421 aa16.63■□□□□ 0.25
CDKL1-206ENST00000529347 PNMA3Q9UL41 463 aa16.63■□□□□ 0.25
CDKL1-206ENST00000529347 ZSWIM8A7E2V4 1837 aa16.63■□□□□ 0.25
CDKL1-206ENST00000529347 COL11A1P12107 1806 aaPredicted RBP16.63■□□□□ 0.25
CDKL1-206ENST00000529347 PPP4R3BQ5MIZ7 849 aa16.62■□□□□ 0.25
CDKL1-206ENST00000529347 CYB5R4Q7L1T6 521 aa16.62■□□□□ 0.25
CDKL1-206ENST00000529347 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
CDKL1-206ENST00000529347 IQCA1Q86XH1 822 aa16.62■□□□□ 0.25
CDKL1-206ENST00000529347 NCOA7Q8NI08 942 aa16.62■□□□□ 0.25
CDKL1-206ENST00000529347 NUP88Q99567 741 aaPredicted RBP16.62■□□□□ 0.25
CDKL1-206ENST00000529347 UBAC1Q9BSL1 405 aa16.62■□□□□ 0.25
CDKL1-206ENST00000529347 SLC45A1Q9Y2W3 748 aa16.62■□□□□ 0.25
CDKL1-206ENST00000529347 MGAMO43451 1857 aa16.62■□□□□ 0.25
CDKL1-206ENST00000529347 RLFQ13129 1914 aa16.62■□□□□ 0.25
CDKL1-206ENST00000529347 USP17L15C9J2P7 530 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 USP17L13C9JLJ4 530 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 USP17L11C9JVI0 530 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 USP17L18D6R9N7 530 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 USP17L22D6RA61 530 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 USP17L17D6RBQ6 530 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 USP17L19D6RCP7 530 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 USP17L20D6RJB6 530 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 F5H6K3 240 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 GPR25O00155 361 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 NDUFB10O96000 172 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 KLRC3Q07444 240 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 USP17L24Q0WX57 530 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 FAM83BQ5T0W9 1011 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 LPAR1Q92633 364 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 ZSCAN10Q96SZ4 725 aaPredicted RBP16.61■□□□□ 0.25
CDKL1-206ENST00000529347 P2RX7Q99572 595 aaKnown RBP16.61■□□□□ 0.25
CDKL1-206ENST00000529347 TCP11L1Q9NUJ3 509 aa16.61■□□□□ 0.25
CDKL1-206ENST00000529347 TLR2O60603 784 aa16.6■□□□□ 0.25
CDKL1-206ENST00000529347 ZKSCAN1P17029 563 aaPredicted RBP16.6■□□□□ 0.25
CDKL1-206ENST00000529347 HOXA7P31268 230 aaPredicted RBP16.6■□□□□ 0.25
CDKL1-206ENST00000529347 SLFN13Q68D06 897 aa16.6■□□□□ 0.25
CDKL1-206ENST00000529347 CATSPERGQ6ZRH7 1159 aa16.6■□□□□ 0.25
CDKL1-206ENST00000529347 RASGRP2Q7LDG7 609 aa16.6■□□□□ 0.25
CDKL1-206ENST00000529347 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
CDKL1-206ENST00000529347 ZNF296Q8WUU4 475 aaPredicted RBP16.6■□□□□ 0.25
CDKL1-206ENST00000529347 MKL1Q969V6 931 aa16.6■□□□□ 0.25
CDKL1-206ENST00000529347 TMEM47Q9BQJ4 181 aa16.6■□□□□ 0.25
CDKL1-206ENST00000529347 CFHR5Q9BXR6 569 aa16.6■□□□□ 0.25
CDKL1-206ENST00000529347 TNKSO95271 1327 aa16.6■□□□□ 0.25
CDKL1-206ENST00000529347 DOCK3Q8IZD9 2030 aa16.6■□□□□ 0.25
CDKL1-206ENST00000529347 WDR46O15213 610 aaKnown RBP16.59■□□□□ 0.25
CDKL1-206ENST00000529347 FLOT1O75955 427 aa16.59■□□□□ 0.25
CDKL1-206ENST00000529347 TOP1P11387 765 aaKnown RBP16.59■□□□□ 0.25
CDKL1-206ENST00000529347 HERVK_113P62684 666 aa16.59■□□□□ 0.25
CDKL1-206ENST00000529347 ENAHQ8N8S7 591 aaPredicted RBP16.59■□□□□ 0.25
CDKL1-206ENST00000529347 PAGR1Q9BTK6 254 aa16.59■□□□□ 0.25
CDKL1-206ENST00000529347 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.24
CDKL1-206ENST00000529347 PEX10O60683 326 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 FKTNO75072 461 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 MCCP23508 829 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 NT5C2P49902 561 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 COL9A3Q14050 684 aaPredicted RBP16.58■□□□□ 0.24
CDKL1-206ENST00000529347 CCDC96Q2M329 555 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 CCDC178Q5BJE1 867 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 RCSD1Q6JBY9 416 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 MB21D2Q8IYB1 491 aaPredicted RBP16.58■□□□□ 0.24
CDKL1-206ENST00000529347 ANKRD13CQ8N6S4 541 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 GMCL1P1Q8NEA9 526 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 USP26Q9BXU7 913 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 KAT14Q9H8E8 782 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 FBXO28Q9NVF7 368 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 ADGRA2Q96PE1 1338 aa16.58■□□□□ 0.24
CDKL1-206ENST00000529347 MYH6P13533 1939 aa16.57■□□□□ 0.24
CDKL1-206ENST00000529347 ERICH2A1L162 156 aa16.57■□□□□ 0.24
CDKL1-206ENST00000529347 PRC1O43663 620 aa16.57■□□□□ 0.24
CDKL1-206ENST00000529347 HSPA4P34932 840 aa16.57■□□□□ 0.24
CDKL1-206ENST00000529347 ANTXR2P58335 489 aa16.57■□□□□ 0.24
CDKL1-206ENST00000529347 SP3Q02447 781 aa16.57■□□□□ 0.24
CDKL1-206ENST00000529347 IKQ13123 557 aaPredicted RBP16.57■□□□□ 0.24
CDKL1-206ENST00000529347 SART3Q15020 963 aaKnown RBP16.57■□□□□ 0.24
CDKL1-206ENST00000529347 ADCK5Q3MIX3 580 aa16.57■□□□□ 0.24
CDKL1-206ENST00000529347 IFIT1BQ5T764 474 aaKnown RBP16.57■□□□□ 0.24
CDKL1-206ENST00000529347 C17orf99Q6UX52 265 aa16.57■□□□□ 0.24
CDKL1-206ENST00000529347 KCTD1Q719H9 257 aa16.57■□□□□ 0.24
CDKL1-206ENST00000529347 CD99L2Q8TCZ2 262 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms