RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 CCDC178Q5BJE1 867 aa16.1■□□□□ 0.17
CD44-224ENST00000526669 SPRYD7Q5W111 196 aa16.1■□□□□ 0.17
CD44-224ENST00000526669 NFXL1Q6ZNB6 911 aa16.1■□□□□ 0.17
CD44-224ENST00000526669 GADL1Q6ZQY3 521 aa16.1■□□□□ 0.17
CD44-224ENST00000526669 KAT14Q9H8E8 782 aa16.1■□□□□ 0.17
CD44-224ENST00000526669 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
CD44-224ENST00000526669 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
CD44-224ENST00000526669 RASSF10A6NK89 507 aa16.09■□□□□ 0.17
CD44-224ENST00000526669 TOP1P11387 765 aaKnown RBP16.09■□□□□ 0.17
CD44-224ENST00000526669 HSPA6P17066 643 aa16.09■□□□□ 0.17
CD44-224ENST00000526669 TOB2Q14106 344 aaPredicted RBP16.09■□□□□ 0.17
CD44-224ENST00000526669 KIAA1755Q5JYT7 1200 aa16.09■□□□□ 0.17
CD44-224ENST00000526669 SPICE1Q8N0Z3 855 aa16.09■□□□□ 0.17
CD44-224ENST00000526669 BRF1Q92994 677 aa16.09■□□□□ 0.17
CD44-224ENST00000526669 MYL10Q9BUA6 226 aa16.09■□□□□ 0.17
CD44-224ENST00000526669 TBC1D2Q9BYX2 928 aa16.09■□□□□ 0.17
CD44-224ENST00000526669 ISY1Q9ULR0 285 aaKnown RBP16.09■□□□□ 0.17
CD44-224ENST00000526669 CCDC69A6NI79 296 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 FAM155AB1AL88 458 aaPredicted RBP16.08■□□□□ 0.16
CD44-224ENST00000526669 AOC2O75106 756 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 NOVP48745 357 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 AK2P54819 239 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 BACE1P56817 501 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 RABEP1Q15276 862 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 PPP4R3BQ5MIZ7 849 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 USP17L2Q6R6M4 530 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 DGKHQ86XP1 1220 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 PNMA1Q8ND90 353 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 CAPNS2Q96L46 248 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 TTC14Q96N46 770 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 ZIC5Q96T25 663 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 NUP88Q99567 741 aaPredicted RBP16.08■□□□□ 0.16
CD44-224ENST00000526669 SH2D4AQ9H788 454 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 VCPKMTQ9H867 229 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 KCNH4Q9UQ05 1017 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 TMX2Q9Y320 296 aa16.08■□□□□ 0.16
CD44-224ENST00000526669 A0A0G2JLL6 359 aaPredicted RBP16.07■□□□□ 0.16
CD44-224ENST00000526669 KLF18A0A0U1RQI7 1052 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 NDUFB10O96000 172 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 ZBTB48P10074 688 aaPredicted RBP16.07■□□□□ 0.16
CD44-224ENST00000526669 RXRAP19793 462 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 SLFN13Q68D06 897 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 PRRT2Q7Z6L0 340 aaPredicted RBP16.07■□□□□ 0.16
CD44-224ENST00000526669 ZNF654Q8IZM8 581 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 ANKS1AQ92625 1134 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 MKL1Q969V6 931 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 HHIPL1Q96JK4 782 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 MTA3Q9BTC8 594 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 KIAA1683Q9H0B3 1180 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 GOPCQ9HD26 462 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 EMILIN3Q9NT22 766 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 THSD7BQ9C0I4 1608 aa16.07■□□□□ 0.16
CD44-224ENST00000526669 FRMPD2Q68DX3 1309 aaPredicted RBP16.06■□□□□ 0.16
CD44-224ENST00000526669 CCL15-CCL14A0A0B4J2E2 113 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 F5H6K3 240 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 CXCL11O14625 94 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 LIFRP42702 1097 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 USP14P54578 494 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 KLRC3Q07444 240 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 SNAPC2Q13487 334 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 CCL15Q16663 113 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 CCDC96Q2M329 555 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 CCDC144CPQ8IYA2 1237 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 NUP133Q8WUM0 1156 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 CCDC102AQ96A19 550 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 TMOD4Q9NZQ9 345 aa16.06■□□□□ 0.16
CD44-224ENST00000526669 C19orf81C9J6K1 198 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 VEGFBP49765 207 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 GTF2A2P52657 109 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 SH3D19Q5HYK7 790 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 FAM83BQ5T0W9 1011 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 TREML2Q5T2D2 321 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 SAMD1Q6SPF0 538 aaPredicted RBP16.05■□□□□ 0.16
CD44-224ENST00000526669 KCTD1Q719H9 257 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 CATIPQ7Z7H3 387 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 MICU3Q86XE3 530 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 BRI3BPQ8WY22 251 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 MS4A4AQ96JQ5 239 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 AGXT2Q9BYV1 514 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 ZNFX1Q9P2E3 1918 aaKnown RBP16.05■□□□□ 0.16
CD44-224ENST00000526669 A0A0G2JMZ2 1700 aa16.05■□□□□ 0.16
CD44-224ENST00000526669 DOCK3Q8IZD9 2030 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 MGAMO43451 1857 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 WDR33Q9C0J8 1336 aaKnown RBP16.04■□□□□ 0.16
CD44-224ENST00000526669 GOLGA8BA8MQT2 603 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 CD2BP2O95400 341 aaKnown RBP16.04■□□□□ 0.16
CD44-224ENST00000526669 LARGE1O95461 756 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 VCAM1P19320 739 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
CD44-224ENST00000526669 STK3Q13188 491 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 MOGSQ13724 837 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 APOA5Q6Q788 366 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 SGMS1Q86VZ5 419 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 GMCL1P1Q8NEA9 526 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 RPAP3Q9H6T3 665 aaPredicted RBP16.04■□□□□ 0.16
CD44-224ENST00000526669 GPCPD1Q9NPB8 672 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 SLC12A7Q9Y666 1083 aa16.04■□□□□ 0.16
CD44-224ENST00000526669 GOLGA8HP0CJ92 632 aa16.03■□□□□ 0.16
CD44-224ENST00000526669 PDHBP11177 359 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms