RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 ST14Q9Y5Y6 855 aa6.81□□□□□ -1.32
CSDE1-211ENST00000525970 PRR33A8MZF0 331 aa6.8□□□□□ -1.32
CSDE1-211ENST00000525970 ETF1P62495 437 aaKnown RBP6.8□□□□□ -1.32
CSDE1-211ENST00000525970 LMNB2Q03252 620 aa6.8□□□□□ -1.32
CSDE1-211ENST00000525970 SNAP47Q5SQN1 464 aa6.8□□□□□ -1.32
CSDE1-211ENST00000525970 CDKAL1Q5VV42 579 aa6.8□□□□□ -1.32
CSDE1-211ENST00000525970 ZSCAN18Q8TBC5 510 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-211ENST00000525970 KCNQ5Q9NR82 932 aa6.8□□□□□ -1.32
CSDE1-211ENST00000525970 C19orf73Q9NVV2 129 aa6.8□□□□□ -1.32
CSDE1-211ENST00000525970 TBX22Q9Y458 520 aa6.8□□□□□ -1.32
CSDE1-211ENST00000525970 TACC3Q9Y6A5 838 aa6.8□□□□□ -1.32
CSDE1-211ENST00000525970 H3BS24 57 aa6.79□□□□□ -1.32
CSDE1-211ENST00000525970 BPNT1O95861 308 aa6.79□□□□□ -1.32
CSDE1-211ENST00000525970 CST3P01034 146 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-211ENST00000525970 CYP7A1P22680 504 aa6.79□□□□□ -1.32
CSDE1-211ENST00000525970 KIR3DL1P43629 444 aa6.79□□□□□ -1.32
CSDE1-211ENST00000525970 LETMD1Q6P1Q0 360 aa6.79□□□□□ -1.32
CSDE1-211ENST00000525970 BNC2Q6ZN30 1099 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-211ENST00000525970 PRR23BQ6ZRT6 265 aa6.79□□□□□ -1.32
CSDE1-211ENST00000525970 GOLM1Q8NBJ4 401 aa6.79□□□□□ -1.32
CSDE1-211ENST00000525970 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
CSDE1-211ENST00000525970 ALPK1Q96QP1 1244 aa6.79□□□□□ -1.32
CSDE1-211ENST00000525970 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.79□□□□□ -1.32
CSDE1-211ENST00000525970 ADAMTS1Q9UHI8 967 aa6.79□□□□□ -1.32
CSDE1-211ENST00000525970 CNTNAP4Q9C0A0 1308 aa6.78□□□□□ -1.32
CSDE1-211ENST00000525970 CFPP27918 469 aa6.78□□□□□ -1.32
CSDE1-211ENST00000525970 RPL6Q02878 288 aaKnown RBP6.78□□□□□ -1.32
CSDE1-211ENST00000525970 NKG7Q16617 165 aa6.78□□□□□ -1.32
CSDE1-211ENST00000525970 SYDE1Q6ZW31 735 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-211ENST00000525970 CCDC84Q86UT8 332 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-211ENST00000525970 ANKLE2Q86XL3 938 aa6.78□□□□□ -1.32
CSDE1-211ENST00000525970 SIAH1Q8IUQ4 282 aa6.78□□□□□ -1.32
CSDE1-211ENST00000525970 FBXO15Q8NCQ5 510 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-211ENST00000525970 PMFBP1Q8TBY8 1022 aa6.78□□□□□ -1.32
CSDE1-211ENST00000525970 RHOVQ96L33 236 aa6.78□□□□□ -1.32
CSDE1-211ENST00000525970 OSBPL2Q9H1P3 480 aa6.78□□□□□ -1.32
CSDE1-211ENST00000525970 TMA7Q9Y2S6 64 aaKnown RBP6.78□□□□□ -1.32
CSDE1-211ENST00000525970 GFRA2O00451 464 aa6.77□□□□□ -1.33
CSDE1-211ENST00000525970 STK10O94804 968 aaKnown RBP6.77□□□□□ -1.33
CSDE1-211ENST00000525970 F13A1P00488 732 aa6.77□□□□□ -1.33
CSDE1-211ENST00000525970 CDK11BP21127 795 aaKnown RBP6.77□□□□□ -1.33
CSDE1-211ENST00000525970 GRK4P32298 578 aa6.77□□□□□ -1.33
CSDE1-211ENST00000525970 EIF4A3P38919 411 aaKnown RBP6.77□□□□□ -1.33
CSDE1-211ENST00000525970 SERINC3Q13530 473 aa6.77□□□□□ -1.33
CSDE1-211ENST00000525970 C1QL4Q86Z23 238 aa6.77□□□□□ -1.33
CSDE1-211ENST00000525970 GATAD2BQ8WXI9 593 aa6.77□□□□□ -1.33
CSDE1-211ENST00000525970 CDK11AQ9UQ88 783 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-211ENST00000525970 NFIBO00712 420 aa6.76□□□□□ -1.33
CSDE1-211ENST00000525970 RAC2P15153 192 aa6.76□□□□□ -1.33
CSDE1-211ENST00000525970 PRAMEF13Q5VWM6 474 aa6.76□□□□□ -1.33
CSDE1-211ENST00000525970 ZNF662Q6ZS27 426 aa6.76□□□□□ -1.33
CSDE1-211ENST00000525970 TMPRSS7Q7RTY8 843 aa6.76□□□□□ -1.33
CSDE1-211ENST00000525970 KIAA0825Q8IV33 1275 aa6.76□□□□□ -1.33
CSDE1-211ENST00000525970 LRRC56Q8IYG6 542 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-211ENST00000525970 NLGN1Q8N2Q7 840 aa6.76□□□□□ -1.33
CSDE1-211ENST00000525970 PIWIL2Q8TC59 973 aaKnown RBP6.76□□□□□ -1.33
CSDE1-211ENST00000525970 EAF1Q96JC9 268 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-211ENST00000525970 SPON2Q9BUD6 331 aa6.76□□□□□ -1.33
CSDE1-211ENST00000525970 ZSWIM4Q9H7M6 989 aa6.76□□□□□ -1.33
CSDE1-211ENST00000525970 FAM221AA4D161 298 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 CILPO75339 1184 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 PGRP06401 933 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 GARTP22102 1010 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 PDE4BQ07343 736 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 NBPF6Q5VWK0 638 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 EGFLAMQ63HQ2 1017 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 FBXL19Q6PCT2 694 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 RIN3Q8TB24 985 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 UBE2FQ969M7 185 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 NBPF4Q96M43 638 aa6.75□□□□□ -1.33
CSDE1-211ENST00000525970 SUPT16HQ9Y5B9 1047 aaKnown RBP6.75□□□□□ -1.33
CSDE1-211ENST00000525970 TLR3O15455 904 aaKnown RBP6.74□□□□□ -1.33
CSDE1-211ENST00000525970 GREM1O60565 184 aa6.74□□□□□ -1.33
CSDE1-211ENST00000525970 CBX7O95931 251 aa6.74□□□□□ -1.33
CSDE1-211ENST00000525970 KRT1P04264 644 aa6.74□□□□□ -1.33
CSDE1-211ENST00000525970 NCLP19338 710 aaKnown RBP6.74□□□□□ -1.33
CSDE1-211ENST00000525970 ETV3P41162 512 aa6.74□□□□□ -1.33
CSDE1-211ENST00000525970 SOX9P48436 509 aa6.74□□□□□ -1.33
CSDE1-211ENST00000525970 TNK2Q07912 1038 aa6.74□□□□□ -1.33
CSDE1-211ENST00000525970 SDE2Q6IQ49 451 aa6.74□□□□□ -1.33
CSDE1-211ENST00000525970 MRPL41Q8IXM3 137 aaKnown RBP6.74□□□□□ -1.33
CSDE1-211ENST00000525970 ZNF296Q8WUU4 475 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-211ENST00000525970 NT5C1AQ9BXI3 368 aa6.74□□□□□ -1.33
CSDE1-211ENST00000525970 NSUN3Q9H649 340 aaKnown RBP6.74□□□□□ -1.33
CSDE1-211ENST00000525970 ZSWIM5Q9P217 1185 aa6.74□□□□□ -1.33
CSDE1-211ENST00000525970 ANKRD62A6NC57 917 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 C1QTNF9P0C862 333 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 PLCG1P19174 1290 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 MPP2Q14168 576 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 FAM196AQ6ZSG2 479 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 LCNL1Q6ZST4 164 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 TTC6Q86TZ1 520 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 JAZF1Q86VZ6 243 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 FBXO27Q8NI29 283 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 ABHD4Q8TB40 342 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 MKL1Q969V6 931 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 DIRC2Q96SL1 478 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 EPB41L4BQ9H329 900 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 ZNF408Q9H9D4 720 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 SLAMF8Q9P0V8 285 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms