RNA–Protein interactions for RNA: ENST00000525012.5

ATM-205, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 258 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-205ENST00000525012 CPLX3Q8WVH0 158 aa4.45□□□□□ -1.7
ATM-205ENST00000525012 SRRTQ9BXP5 876 aaKnown RBP4.45□□□□□ -1.7
ATM-205ENST00000525012 ASCC2Q9H1I8 757 aaPredicted RBP4.45□□□□□ -1.7
ATM-205ENST00000525012 ANTXR1Q9H6X2 564 aa4.45□□□□□ -1.7
ATM-205ENST00000525012 CAPN10Q9HC96 672 aa4.45□□□□□ -1.7
ATM-205ENST00000525012 SEMA3GQ9NS98 782 aa4.45□□□□□ -1.7
ATM-205ENST00000525012 SLC12A7Q9Y666 1083 aa4.45□□□□□ -1.7
ATM-205ENST00000525012 PITPNM2Q9BZ72 1349 aa4.45□□□□□ -1.7
ATM-205ENST00000525012 H3BS24 57 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 FUT4P22083 530 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 NASPP49321 788 aaPredicted RBP4.44□□□□□ -1.7
ATM-205ENST00000525012 PLCL1Q15111 1095 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 NBPF12Q5TAG4 269 aaPredicted RBP4.44□□□□□ -1.7
ATM-205ENST00000525012 TMPRSS7Q7RTY8 843 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 DTWD2Q8NBA8 298 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 PI4K2BQ8TCG2 481 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 UBE2FQ969M7 185 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 CCDC120Q96HB5 630 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 Q96M66 194 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 DUSP15Q9H1R2 295 aaPredicted RBP4.44□□□□□ -1.7
ATM-205ENST00000525012 IGSF5Q9NSI5 407 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 ZSWIM5Q9P217 1185 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 PPT2Q9UMR5 302 aa4.44□□□□□ -1.7
ATM-205ENST00000525012 OAS3Q9Y6K5 1087 aaKnown RBP4.44□□□□□ -1.7
ATM-205ENST00000525012 COL17A1Q9UMD9 1497 aaPredicted RBP4.43□□□□□ -1.7
ATM-205ENST00000525012 SRFP11831 508 aa4.43□□□□□ -1.7
ATM-205ENST00000525012 ATF4P18848 351 aaPredicted RBP4.43□□□□□ -1.7
ATM-205ENST00000525012 GUCY2CP25092 1073 aa4.43□□□□□ -1.7
ATM-205ENST00000525012 GIPRP48546 466 aa4.43□□□□□ -1.7
ATM-205ENST00000525012 IRAK1P51617 712 aa4.43□□□□□ -1.7
ATM-205ENST00000525012 ZP2Q05996 745 aa4.43□□□□□ -1.7
ATM-205ENST00000525012 IKZF1Q13422 519 aa4.43□□□□□ -1.7
ATM-205ENST00000525012 XP32Q5T750 250 aa4.43□□□□□ -1.7
ATM-205ENST00000525012 SLC23A3Q6PIS1 610 aa4.43□□□□□ -1.7
ATM-205ENST00000525012 ZNF574Q6ZN55 896 aaPredicted RBP4.43□□□□□ -1.7
ATM-205ENST00000525012 NFXL1Q6ZNB6 911 aa4.43□□□□□ -1.7
ATM-205ENST00000525012 SMARCC1Q92922 1105 aaPredicted RBP4.43□□□□□ -1.7
ATM-205ENST00000525012 SLC9A7Q96T83 725 aa4.43□□□□□ -1.7
ATM-205ENST00000525012 LRRN2O75325 713 aa4.42□□□□□ -1.7
ATM-205ENST00000525012 TPP2P29144 1249 aaPredicted RBP4.42□□□□□ -1.7
ATM-205ENST00000525012 POLR2BP30876 1174 aaKnown RBP4.42□□□□□ -1.7
ATM-205ENST00000525012 CLEC16AQ2KHT3 1053 aa4.42□□□□□ -1.7
ATM-205ENST00000525012 NBPF9Q3BBW0 867 aa4.42□□□□□ -1.7
ATM-205ENST00000525012 BBS9Q3SYG4 887 aa4.42□□□□□ -1.7
ATM-205ENST00000525012 TSPYL5Q86VY4 417 aaPredicted RBP4.42□□□□□ -1.7
ATM-205ENST00000525012 TMEM192Q8IY95 271 aa4.42□□□□□ -1.7
ATM-205ENST00000525012 ABI1Q8IZP0 508 aa4.42□□□□□ -1.7
ATM-205ENST00000525012 C19orf47Q8N9M1 422 aaKnown RBP4.42□□□□□ -1.7
ATM-205ENST00000525012 SLC43A3Q8NBI5 491 aa4.42□□□□□ -1.7
ATM-205ENST00000525012 SLC6A18Q96N87 628 aa4.42□□□□□ -1.7
ATM-205ENST00000525012 ATP13A1Q9HD20 1204 aa4.42□□□□□ -1.7
ATM-205ENST00000525012 SUCOQ9UBS9 1254 aaKnown RBP4.42□□□□□ -1.7
ATM-205ENST00000525012 BIN1O00499 593 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 SSBP05455 408 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATM-205ENST00000525012 ACRP10323 421 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 PMS1P54277 932 aaKnown RBP4.41□□□□□ -1.7
ATM-205ENST00000525012 CASP7P55210 303 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 ARID5AQ03989 594 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 ZNF792Q3KQV3 632 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 ANKRD39Q53RE8 183 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 UNC5AQ6ZN44 842 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 CCDC81Q6ZN84 652 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 LSRQ86X29 649 aaPredicted RBP4.41□□□□□ -1.7
ATM-205ENST00000525012 WFDC3Q8IUB2 231 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 SYTL5Q8TDW5 730 aaPredicted RBP4.41□□□□□ -1.7
ATM-205ENST00000525012 SYTL4Q96C24 671 aaPredicted RBP4.41□□□□□ -1.7
ATM-205ENST00000525012 MKRN2Q9H000 416 aaKnown RBP4.41□□□□□ -1.7
ATM-205ENST00000525012 PRR13Q9NZ81 148 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 ADGRE2Q9UHX3 823 aa4.41□□□□□ -1.7
ATM-205ENST00000525012 CD96P40200 585 aa4.4□□□□□ -1.71
ATM-205ENST00000525012 NMIQ13287 307 aaPredicted RBP4.4□□□□□ -1.71
ATM-205ENST00000525012 AUHQ13825 339 aaKnown RBP4.4□□□□□ -1.71
ATM-205ENST00000525012 GAB4Q2WGN9 574 aa4.4□□□□□ -1.71
ATM-205ENST00000525012 RUFY4Q6ZNE9 571 aa4.4□□□□□ -1.71
ATM-205ENST00000525012 CBLL1Q75N03 491 aa4.4□□□□□ -1.71
ATM-205ENST00000525012 CREG2Q8IUH2 290 aa4.4□□□□□ -1.71
ATM-205ENST00000525012 ZNF655Q8N720 491 aaPredicted RBP4.4□□□□□ -1.71
ATM-205ENST00000525012 DAGLBQ8NCG7 672 aa4.4□□□□□ -1.71
ATM-205ENST00000525012 SHDQ96IW2 340 aa4.4□□□□□ -1.71
ATM-205ENST00000525012 PHAXQ9H814 394 aaKnown RBP4.4□□□□□ -1.71
ATM-205ENST00000525012 CARS2Q9HA77 564 aaKnown RBP4.4□□□□□ -1.71
ATM-205ENST00000525012 DUSP13Q9UII6 198 aa4.4□□□□□ -1.71
ATM-205ENST00000525012 FBXL21Q9UKT6 434 aa4.4□□□□□ -1.71
ATM-205ENST00000525012 PCDHB12Q9Y5F1 795 aa4.4□□□□□ -1.71
ATM-205ENST00000525012 A0A1W2PQH9 124 aa4.39□□□□□ -1.71
ATM-205ENST00000525012 SIGLEC6O43699 453 aa4.39□□□□□ -1.71
ATM-205ENST00000525012 ESR1P03372 595 aa4.39□□□□□ -1.71
ATM-205ENST00000525012 RNASE1P07998 156 aaKnown RBP4.39□□□□□ -1.71
ATM-205ENST00000525012 ZC3H6P61129 1189 aaKnown RBP4.39□□□□□ -1.71
ATM-205ENST00000525012 PPP2R5EQ16537 467 aa4.39□□□□□ -1.71
ATM-205ENST00000525012 TNNI3KQ59H18 835 aa4.39□□□□□ -1.71
ATM-205ENST00000525012 ATG4DQ86TL0 474 aaPredicted RBP4.39□□□□□ -1.71
ATM-205ENST00000525012 TTC6Q86TZ1 520 aa4.39□□□□□ -1.71
ATM-205ENST00000525012 CCDC144CPQ8IYA2 1237 aa4.39□□□□□ -1.71
ATM-205ENST00000525012 DHX38Q92620 1227 aaKnown RBP4.39□□□□□ -1.71
ATM-205ENST00000525012 ALPK1Q96QP1 1244 aa4.39□□□□□ -1.71
ATM-205ENST00000525012 GMLQ99445 158 aa4.39□□□□□ -1.71
ATM-205ENST00000525012 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.39□□□□□ -1.71
ATM-205ENST00000525012 TINF2Q9BSI4 451 aa4.39□□□□□ -1.71
ATM-205ENST00000525012 PRDM14Q9GZV8 571 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms