RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 USP17L15C9J2P7 530 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 USP17L13C9JLJ4 530 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 USP17L11C9JVI0 530 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 USP17L18D6R9N7 530 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 USP17L22D6RA61 530 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 USP17L17D6RBQ6 530 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 USP17L19D6RCP7 530 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 USP17L20D6RJB6 530 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 NMT2O60551 498 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 GCLCP48506 637 aaPredicted RBP21.24■□□□□ 0.99
CLK4-211ENST00000522556 PRKCZQ05513 592 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 USP17L24Q0WX57 530 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 Q3C1V9 767 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 ZMYM6O95789 1325 aa21.24■□□□□ 0.99
CLK4-211ENST00000522556 CHMLP26374 656 aa21.23■□□□□ 0.99
CLK4-211ENST00000522556 FCGRTP55899 365 aa21.23■□□□□ 0.99
CLK4-211ENST00000522556 SOX10P56693 466 aa21.23■□□□□ 0.99
CLK4-211ENST00000522556 TFAP4Q01664 338 aa21.23■□□□□ 0.99
CLK4-211ENST00000522556 PDE4BQ07343 736 aa21.23■□□□□ 0.99
CLK4-211ENST00000522556 ZNF444Q8N0Y2 327 aaPredicted RBP21.23■□□□□ 0.99
CLK4-211ENST00000522556 NUP88Q99567 741 aaPredicted RBP21.23■□□□□ 0.99
CLK4-211ENST00000522556 TANGO6Q9C0B7 1094 aa21.23■□□□□ 0.99
CLK4-211ENST00000522556 MORF4L1Q9UBU8 362 aa21.23■□□□□ 0.99
CLK4-211ENST00000522556 SRRDQ9UH36 339 aa21.23■□□□□ 0.99
CLK4-211ENST00000522556 MYPNQ86TC9 1320 aa21.23■□□□□ 0.99
CLK4-211ENST00000522556 CENPFP49454 3210 aa21.23■□□□□ 0.99
CLK4-211ENST00000522556 HIP1O00291 1037 aa21.22■□□□□ 0.99
CLK4-211ENST00000522556 RASGRP2Q7LDG7 609 aa21.22■□□□□ 0.99
CLK4-211ENST00000522556 LRRC47Q8N1G4 583 aaKnown RBP21.22■□□□□ 0.99
CLK4-211ENST00000522556 NEDD1Q8NHV4 660 aa21.22■□□□□ 0.99
CLK4-211ENST00000522556 SH3TC2Q8TF17 1288 aa21.22■□□□□ 0.99
CLK4-211ENST00000522556 CCDC136Q96JN2 1154 aa21.22■□□□□ 0.99
CLK4-211ENST00000522556 PORCNQ9H237 461 aa21.22■□□□□ 0.99
CLK4-211ENST00000522556 FBXO28Q9NVF7 368 aa21.22■□□□□ 0.99
CLK4-211ENST00000522556 BTBD7Q9P203 1132 aa21.22■□□□□ 0.99
CLK4-211ENST00000522556 RAD21O60216 631 aa21.21■□□□□ 0.99
CLK4-211ENST00000522556 TSPY3P0CV98 308 aa21.21■□□□□ 0.99
CLK4-211ENST00000522556 TSPY8P0CW00 308 aa21.21■□□□□ 0.99
CLK4-211ENST00000522556 SAMD1Q6SPF0 538 aaPredicted RBP21.21■□□□□ 0.99
CLK4-211ENST00000522556 CHMP4CQ96CF2 233 aa21.21■□□□□ 0.99
CLK4-211ENST00000522556 IL17RBQ9NRM6 502 aa21.21■□□□□ 0.99
CLK4-211ENST00000522556 MTMR4Q9NYA4 1195 aa21.21■□□□□ 0.99
CLK4-211ENST00000522556 NYAP2Q9P242 653 aa21.21■□□□□ 0.99
CLK4-211ENST00000522556 CLIP2Q9UDT6 1046 aa21.21■□□□□ 0.99
CLK4-211ENST00000522556 NEDD4P46934 1319 aa21.21■□□□□ 0.99
CLK4-211ENST00000522556 TNPO2O14787 897 aaKnown RBP21.2■□□□□ 0.98
CLK4-211ENST00000522556 MYCP01106 439 aaPredicted RBP21.2■□□□□ 0.98
CLK4-211ENST00000522556 SLC3A2P08195 630 aaKnown RBP21.2■□□□□ 0.98
CLK4-211ENST00000522556 FGRP09769 529 aa21.2■□□□□ 0.98
CLK4-211ENST00000522556 ERVK-9P63128 1117 aa21.2■□□□□ 0.98
CLK4-211ENST00000522556 ERVK-24P63145 666 aa21.2■□□□□ 0.98
CLK4-211ENST00000522556 RRP12Q5JTH9 1297 aaKnown RBP21.2■□□□□ 0.98
CLK4-211ENST00000522556 FAM83BQ5T0W9 1011 aa21.2■□□□□ 0.98
CLK4-211ENST00000522556 LPAR1Q92633 364 aa21.2■□□□□ 0.98
CLK4-211ENST00000522556 SH2D4AQ9H788 454 aa21.2■□□□□ 0.98
CLK4-211ENST00000522556 ORC4O43929 436 aa21.19■□□□□ 0.98
CLK4-211ENST00000522556 RANBP6O60518 1105 aaKnown RBP21.19■□□□□ 0.98
CLK4-211ENST00000522556 NDUFB10O96000 172 aa21.19■□□□□ 0.98
CLK4-211ENST00000522556 PTH1RQ03431 593 aa21.19■□□□□ 0.98
CLK4-211ENST00000522556 ATG4CQ96DT6 458 aa21.19■□□□□ 0.98
CLK4-211ENST00000522556 ZNF287Q9HBT7 754 aa21.19■□□□□ 0.98
CLK4-211ENST00000522556 TSPY2A6NKD2 308 aa21.18■□□□□ 0.98
CLK4-211ENST00000522556 WDR46O15213 610 aaKnown RBP21.18■□□□□ 0.98
CLK4-211ENST00000522556 NEFLP07196 543 aa21.18■□□□□ 0.98
CLK4-211ENST00000522556 FLT3LGP49771 235 aa21.18■□□□□ 0.98
CLK4-211ENST00000522556 MFAP1P55081 439 aaKnown RBP21.18■□□□□ 0.98
CLK4-211ENST00000522556 ARHGEF6Q15052 776 aa21.18■□□□□ 0.98
CLK4-211ENST00000522556 GPRC5AQ8NFJ5 357 aa21.18■□□□□ 0.98
CLK4-211ENST00000522556 ARMC5Q96C12 935 aa21.18■□□□□ 0.98
CLK4-211ENST00000522556 DSCC1Q9BVC3 393 aa21.18■□□□□ 0.98
CLK4-211ENST00000522556 GOPCQ9HD26 462 aa21.18■□□□□ 0.98
CLK4-211ENST00000522556 TOMM22Q9NS69 142 aa21.18■□□□□ 0.98
CLK4-211ENST00000522556 F5H6K3 240 aa21.17■□□□□ 0.98
CLK4-211ENST00000522556 FLOT1O75955 427 aa21.17■□□□□ 0.98
CLK4-211ENST00000522556 GNRH1P01148 92 aa21.17■□□□□ 0.98
CLK4-211ENST00000522556 KLRC3Q07444 240 aa21.17■□□□□ 0.98
CLK4-211ENST00000522556 SLC9C1Q4G0N8 1177 aa21.17■□□□□ 0.98
CLK4-211ENST00000522556 LBX2Q6XYB7 198 aa21.17■□□□□ 0.98
CLK4-211ENST00000522556 STAG1Q8WVM7 1258 aa21.17■□□□□ 0.98
CLK4-211ENST00000522556 RABGAP1Q9Y3P9 1069 aa21.17■□□□□ 0.98
CLK4-211ENST00000522556 RAD50Q92878 1312 aa21.17■□□□□ 0.98
CLK4-211ENST00000522556 RBBP6Q7Z6E9 1792 aaKnown RBP21.17■□□□□ 0.98
CLK4-211ENST00000522556 TTLL1O95922 423 aa21.16■□□□□ 0.98
CLK4-211ENST00000522556 ELNP15502 786 aa21.16■□□□□ 0.98
CLK4-211ENST00000522556 DSG3P32926 999 aa21.16■□□□□ 0.98
CLK4-211ENST00000522556 COG2Q14746 738 aa21.16■□□□□ 0.98
CLK4-211ENST00000522556 AKNAD1Q5T1N1 836 aa21.16■□□□□ 0.98
CLK4-211ENST00000522556 RAET1EQ8TD07 263 aa21.16■□□□□ 0.98
CLK4-211ENST00000522556 ZNF333Q96JL9 665 aa21.16■□□□□ 0.98
CLK4-211ENST00000522556 TAF6LQ9Y6J9 622 aa21.16■□□□□ 0.98
CLK4-211ENST00000522556 POTEFA5A3E0 1075 aa21.15■□□□□ 0.98
CLK4-211ENST00000522556 SGSM2O43147 1006 aa21.15■□□□□ 0.98
CLK4-211ENST00000522556 MKL1Q969V6 931 aa21.15■□□□□ 0.98
CLK4-211ENST00000522556 GJD2Q9UKL4 321 aa21.15■□□□□ 0.98
CLK4-211ENST00000522556 HOXD10P28358 340 aa21.14■□□□□ 0.97
CLK4-211ENST00000522556 PRMT2P55345 433 aa21.14■□□□□ 0.97
CLK4-211ENST00000522556 MTFR1Q15390 333 aa21.14■□□□□ 0.97
CLK4-211ENST00000522556 GTF3C2Q8WUA4 911 aaPredicted RBP21.14■□□□□ 0.97
CLK4-211ENST00000522556 STX8Q9UNK0 236 aa21.14■□□□□ 0.97
CLK4-211ENST00000522556 ZNF213O14771 459 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms