RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 CLEC17AQ6ZS10 378 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 MICU3Q86XE3 530 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 CCDC17Q96LX7 622 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 MAP3K14Q99558 947 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 HERC5Q9UII4 1024 aaKnown RBP11.13□□□□□ -0.63
SHPRH-209ENST00000521977 NAP1L2Q9ULW6 460 aaPredicted RBP11.13□□□□□ -0.63
SHPRH-209ENST00000521977 SRCAPQ6ZRS2 3230 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 H7C1D1 291 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 TBC1D12O60347 775 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 GRIN3BO60391 1043 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 CALM1P0DP23 149 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 CALM2P0DP24 149 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 CALM3P0DP25 149 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 FDPSP14324 419 aaKnown RBP11.12□□□□□ -0.63
SHPRH-209ENST00000521977 AKR1B1P15121 316 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 IFNAR1P17181 557 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 ADD1P35611 737 aaKnown RBP11.12□□□□□ -0.63
SHPRH-209ENST00000521977 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 CATIPQ7Z7H3 387 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 RAB11FIP4Q86YS3 637 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 ZSCAN29Q8IWY8 852 aaPredicted RBP11.12□□□□□ -0.63
SHPRH-209ENST00000521977 FANCBQ8NB91 859 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 TNPO1Q92973 898 aaKnown RBP11.12□□□□□ -0.63
SHPRH-209ENST00000521977 CSRNP1Q96S65 589 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 MYL10Q9BUA6 226 aa11.12□□□□□ -0.63
SHPRH-209ENST00000521977 WDR33Q9C0J8 1336 aaKnown RBP11.11□□□□□ -0.63
SHPRH-209ENST00000521977 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
SHPRH-209ENST00000521977 CCDC196A0A1B0GTZ2 297 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 STX6O43752 255 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 DTNBO60941 627 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 CDKL5O76039 1030 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 SLURP2P0DP57 97 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 RXRAP19793 462 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 PDCP20941 246 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 TNNI2P48788 182 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 GPR162Q16538 588 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 RTN1Q16799 776 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 TBC1D10BQ4KMP7 808 aaPredicted RBP11.11□□□□□ -0.63
SHPRH-209ENST00000521977 CRACR2BQ8N4Y2 399 aaPredicted RBP11.11□□□□□ -0.63
SHPRH-209ENST00000521977 CEP95Q96GE4 821 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 TMEM47Q9BQJ4 181 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 VEZTQ9HBM0 779 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 RBM28Q9NW13 759 aaKnown RBP11.11□□□□□ -0.63
SHPRH-209ENST00000521977 MTMR4Q9NYA4 1195 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 MTMR6Q9Y217 621 aa11.11□□□□□ -0.63
SHPRH-209ENST00000521977 STK36Q9NRP7 1315 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 C2orf72A6NCS6 295 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 FAM196BA6NMK8 535 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 CPLX1O14810 134 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 DDNO94850 711 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-209ENST00000521977 EPS15P42566 896 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 FUT2Q10981 343 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 TNFAIP1Q13829 316 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 CERKLQ49MI3 558 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-209ENST00000521977 PPP4R3BQ5MIZ7 849 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 RBM26Q5T8P6 1007 aaKnown RBP11.1□□□□□ -0.63
SHPRH-209ENST00000521977 LARP1BQ659C4 914 aaKnown RBP11.1□□□□□ -0.63
SHPRH-209ENST00000521977 CPLX2Q6PUV4 134 aaKnown RBP11.1□□□□□ -0.63
SHPRH-209ENST00000521977 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-209ENST00000521977 NBPF11Q86T75 865 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 PNMA1Q8ND90 353 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 TEPSINQ96N21 525 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 TMEM39BQ9GZU3 492 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 KAT14Q9H8E8 782 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 HACL1Q9UJ83 578 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 KIF3AQ9Y496 699 aa11.1□□□□□ -0.63
SHPRH-209ENST00000521977 ASTN2O75129 1339 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-209ENST00000521977 SLC34A2O95436 690 aa11.09□□□□□ -0.63
SHPRH-209ENST00000521977 FMNL1O95466 1100 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-209ENST00000521977 ZSCAN22P10073 491 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-209ENST00000521977 TOP1P11387 765 aaKnown RBP11.09□□□□□ -0.63
SHPRH-209ENST00000521977 GUCY1A2P33402 732 aa11.09□□□□□ -0.63
SHPRH-209ENST00000521977 HIRAP54198 1017 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-209ENST00000521977 RASA3Q14644 834 aa11.09□□□□□ -0.63
SHPRH-209ENST00000521977 TMTC3Q6ZXV5 915 aa11.09□□□□□ -0.63
SHPRH-209ENST00000521977 CCDC144CPQ8IYA2 1237 aa11.09□□□□□ -0.63
SHPRH-209ENST00000521977 FAM184AQ8NB25 1140 aa11.09□□□□□ -0.63
SHPRH-209ENST00000521977 NUP133Q8WUM0 1156 aa11.09□□□□□ -0.63
SHPRH-209ENST00000521977 DDX11Q96FC9 970 aa11.09□□□□□ -0.63
SHPRH-209ENST00000521977 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
SHPRH-209ENST00000521977 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.09□□□□□ -0.63
SHPRH-209ENST00000521977 ORC3Q9UBD5 711 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-209ENST00000521977 PITPNM2Q9BZ72 1349 aa11.09□□□□□ -0.63
SHPRH-209ENST00000521977 TTLL1O95922 423 aa11.08□□□□□ -0.64
SHPRH-209ENST00000521977 F13A1P00488 732 aa11.08□□□□□ -0.64
SHPRH-209ENST00000521977 RRP1BQ14684 758 aaKnown RBP11.08□□□□□ -0.64
SHPRH-209ENST00000521977 GRM4Q14833 912 aa11.08□□□□□ -0.64
SHPRH-209ENST00000521977 NFKBIBQ15653 356 aa11.08□□□□□ -0.64
SHPRH-209ENST00000521977 TMEM179Q6ZVK1 233 aa11.08□□□□□ -0.64
SHPRH-209ENST00000521977 APOBEC3FQ8IUX4 373 aaKnown RBP11.08□□□□□ -0.64
SHPRH-209ENST00000521977 MKL1Q969V6 931 aa11.08□□□□□ -0.64
SHPRH-209ENST00000521977 ADARB2Q9NS39 739 aaKnown RBP11.08□□□□□ -0.64
SHPRH-209ENST00000521977 NYAP2Q9P242 653 aa11.08□□□□□ -0.64
SHPRH-209ENST00000521977 MAD2L2Q9UI95 211 aa11.08□□□□□ -0.64
SHPRH-209ENST00000521977 STX8Q9UNK0 236 aa11.08□□□□□ -0.64
SHPRH-209ENST00000521977 PALM3A6NDB9 673 aaPredicted RBP11.07□□□□□ -0.64
SHPRH-209ENST00000521977 PLEKHA8P1O95397 391 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms