RNA–Protein interactions for RNA: ENST00000516473.1

RNU6-1089P-201, Transcript of RNA, U6 small nuclear 1089, pseudogene, humanhuman

BASIC

Gene RNU6-1089P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1089P-201ENST00000516473 PRKD1Q15139 912 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 KIF4BQ2VIQ3 1234 aa0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 USP39Q53GS9 565 aaKnown RBP0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 BORAQ6PGQ7 559 aa0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 RNF214Q8ND24 703 aa0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 Q8TCH9 128 aa0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 DDX54Q8TDD1 881 aaKnown RBP0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 ADAMTS17Q8TE56 1095 aa0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 LINC01599Q8WXQ3 324 aa0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 SYTL4Q96C24 671 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 TTPALQ9BTX7 342 aa0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 CLEC4MQ9H2X3 399 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 CCDC86Q9H6F5 360 aaKnown RBP0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 TMEM63CQ9P1W3 806 aa0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 TPX2Q9ULW0 747 aaKnown RBP0.8□□□□□ -2.28
RNU6-1089P-201ENST00000516473 A0A1W2PP55 124 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 FOXN1O15353 648 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 DKK1O94907 266 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 ZFP36P26651 326 aaKnown RBP0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 ZNF76P36508 570 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 ATP1A2P50993 1020 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 KRTAP10-8P60410 259 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 TMEM62Q0P6H9 643 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 SURF1Q15526 300 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 TARBP2Q15633 366 aaKnown RBP0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 RGL3Q3MIN7 710 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 FNDC7Q5VTL7 733 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 Q6ZPA2 131 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 KRTAP5-5Q701N2 237 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 ETFBKMTQ8IXQ9 262 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 ULK2Q8IYT8 1036 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 LARGE2Q8N3Y3 721 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 EXTL1Q92935 676 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 AK7Q96M32 723 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 MMRN2Q9H8L6 949 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 ELP3Q9H9T3 547 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 NTMQ9P121 344 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 ADAM29Q9UKF5 820 aa0.79□□□□□ -2.28
RNU6-1089P-201ENST00000516473 PALM3A6NDB9 673 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 MROH6A6NGR9 719 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 METTL12A8MUP2 240 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 NRDCO43847 1150 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 ATF2P15336 505 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 MAKP20794 623 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 CBX2Q14781 532 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 RAB3GAP1Q15042 981 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 LCE1CQ5T751 118 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 LCE1BQ5T7P3 118 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 PDE12Q6L8Q7 609 aaKnown RBP0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 USP43Q70EL4 1123 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 UBE3DQ7Z6J8 389 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 FAM124AQ86V42 546 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 SMARCC1Q92922 1105 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 DUSP15Q9H1R2 295 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 RIOX1Q9H6W3 641 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 SPATA6Q9NWH7 488 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 FAM13BQ9NYF5 915 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 RNF7Q9UBF6 113 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 DUSP13Q9UII6 198 aa0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1089P-201ENST00000516473 NUDT19A8MXV4 375 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 ZFPL1O95159 310 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 B3GALT4O96024 378 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 LMNAP02545 664 aaKnown RBP0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 C1SP09871 688 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 CCKBRP32239 447 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 KIR3DL1P43629 444 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 ERVK-24P63145 666 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 ZNF200P98182 395 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 AP3B2Q13367 1082 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 IRF5Q13568 498 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 PRR16Q569H4 304 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 KANK4Q5T7N3 995 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 ARMCX6Q7L4S7 300 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 ADGRG3Q86Y34 549 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 SIX5Q8N196 739 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 MTMR14Q8NCE2 650 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 GPR150Q8NGU9 434 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 SMG7Q92540 1137 aaKnown RBP0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 DDX11Q96FC9 970 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 WBP1Q96G27 269 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 HINFPQ9BQA5 517 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 G6PC3Q9BUM1 346 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 ZC3H12CQ9C0D7 883 aaKnown RBP0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 GPBP1L1Q9HC44 474 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 RBM19Q9Y4C8 960 aaKnown RBP0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 PCDHA11Q9Y5I1 949 aa0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 COL3A1P02461 1466 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1089P-201ENST00000516473 A0A096LPE4 126 aa0.76□□□□□ -2.29
RNU6-1089P-201ENST00000516473 A0A1W2PPZ6 126 aa0.76□□□□□ -2.29
RNU6-1089P-201ENST00000516473 B4GALT3O60512 393 aa0.76□□□□□ -2.29
RNU6-1089P-201ENST00000516473 LGR5O75473 907 aa0.76□□□□□ -2.29
RNU6-1089P-201ENST00000516473 USP2O75604 605 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1089P-201ENST00000516473 LRIG2O94898 1065 aa0.76□□□□□ -2.29
RNU6-1089P-201ENST00000516473 ACRP10323 421 aa0.76□□□□□ -2.29
RNU6-1089P-201ENST00000516473 PROZP22891 400 aa0.76□□□□□ -2.29
RNU6-1089P-201ENST00000516473 NTF4P34130 210 aa0.76□□□□□ -2.29
RNU6-1089P-201ENST00000516473 FSTL1Q12841 308 aa0.76□□□□□ -2.29
RNU6-1089P-201ENST00000516473 SLC14A2Q15849 920 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms