RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ZNF274Q96GC6 653 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 RBM17Q96I25 401 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 TSGA10Q9BZW7 698 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 ODF2LQ9ULJ1 636 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 N6AMT1Q9Y5N5 214 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 CARMIL3Q8ND23 1372 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 A0A087WUV0 522 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 IRS4O14654 1257 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 ZNF189O75820 626 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 IL6STP40189 918 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 PLA2G4AP47712 749 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 NAA16Q6N069 864 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 POLR3CQ9BUI4 534 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 RETREG1Q9H6L5 497 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 BCL9LQ86UU0 1499 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 SCN7AQ01118 1682 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 ERVV-1B6SEH8 477 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 SKAP2O75563 359 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 KRT38O76015 456 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 PNMA6AP0CW24 399 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 METTL24Q5JXM2 366 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 LDHAL6AQ6ZMR3 332 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 FAM114A1Q8IWE2 563 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 KIAA1524Q8TCG1 905 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 FTOQ9C0B1 505 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 DACT1Q9NYF0 836 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 ANKIB1Q9P2G1 1089 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 EXOC5O00471 708 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 GPAA1O43292 621 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 ATP6V1G1O75348 118 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 NR1I2O75469 434 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 ERLIN2O94905 339 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 PDE8BO95263 885 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 FGFR2P21802 821 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 ADD2P35612 726 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 HAND2P61296 217 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 MPP3Q13368 585 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 CKAP2LQ8IYA6 745 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 SPDYE1Q8NFV5 336 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 SNRNP27Q8WVK2 155 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 NUP62CLQ9H1M0 184 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 PIH1D3Q9NQM4 214 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 DENND2AQ9ULE3 1009 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 HPS5Q9UPZ3 1129 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 LTBP4Q8N2S1 1624 aa8.43□□□□□ -1.06
PDLIM5-219ENST00000514743 TCRBV5S4A2TA0A5A2 114 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 ENO4A6NNW6 628 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 PDE8AO60658 829 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 INTS5Q6P9B9 1019 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 SAMD3Q8N6K7 520 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 RMDN2Q96LZ7 410 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 A1CFQ9NQ94 594 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 TMEM98Q9Y2Y6 226 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 FHOD1Q9Y613 1164 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 RTN2O75298 545 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 EIF5P55010 431 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 WASHC4Q2M389 1173 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 PARP9Q8IXQ6 854 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 RSPH1Q8WYR4 309 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 C16orf45Q96MC5 204 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 SCLT1Q96NL6 688 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 CENPOQ9BU64 300 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 CLSTN2Q9H4D0 955 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 TRMT112Q9UI30 125 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 PYCARDQ9ULZ3 195 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 MYH13Q9UKX3 1938 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 OAS2P29728 719 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 PHKA1P46020 1223 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 CEBPZQ03701 1054 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 TYRO3Q06418 890 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 SFSWAPQ12872 951 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 MAP3K11Q16584 847 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 KIAA1328Q86T90 577 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 CCDC114Q96M63 670 aa8.42□□□□□ -1.06
PDLIM5-219ENST00000514743 F8VZ95 297 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 H3BQV1 296 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 CCDC192P0DO97 292 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 IMMTQ16891 758 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 CCDC102BQ68D86 513 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 CLEC4GQ6UXB4 293 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 SAAL1Q96ER3 474 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 CLIP2Q9UDT6 1046 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 FBXO9Q9UK97 447 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 SPATA31A1Q5TZJ5 1347 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 CACNA1SQ13698 1873 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 RTN3O95197 1032 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 KCNA2P16389 499 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 STIP1P31948 543 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 NAA25Q14CX7 972 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 IQCB1Q15051 598 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 LRRFIP1Q32MZ4 808 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 PREPLQ4J6C6 727 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 DCAF8Q5TAQ9 597 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 SUSD4Q5VX71 490 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 TBC1D10CQ8IV04 446 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 EXOC4Q96A65 974 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 SYTL4Q96C24 671 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 USP28Q96RU2 1077 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 GOLPH3LQ9H4A5 285 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 308.3 ms