RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 LDHBP07195 334 aaKnown RBP8.91□□□□□ -0.98
USP46-208ENST00000512656 IL15P40933 162 aaPredicted RBP8.91□□□□□ -0.98
USP46-208ENST00000512656 RFC5P40937 340 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 PPIL2Q13356 520 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 SNAPC2Q13487 334 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 KIF22Q14807 665 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 C6orf118Q5T5N4 469 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 PPP1R26Q5T8A7 1209 aaPredicted RBP8.91□□□□□ -0.98
USP46-208ENST00000512656 Q6ZVU0 165 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 ATG9AQ7Z3C6 839 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 FAM151AQ8WW52 585 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 BRI3BPQ8WY22 251 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 PCMTD1Q96MG8 357 aaPredicted RBP8.91□□□□□ -0.98
USP46-208ENST00000512656 WRNIP1Q96S55 665 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 OCSTAMPQ9BR26 566 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 ZNF341Q9BYN7 854 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 SIL1Q9H173 461 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 DENND2AQ9ULE3 1009 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 NOB1Q9ULX3 412 aaKnown RBP8.91□□□□□ -0.98
USP46-208ENST00000512656 PTPN22Q9Y2R2 807 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 SALL1Q9NSC2 1324 aa8.9□□□□□ -0.98
USP46-208ENST00000512656 GNAI3P08754 354 aa8.9□□□□□ -0.98
USP46-208ENST00000512656 GMPRP36959 345 aa8.9□□□□□ -0.98
USP46-208ENST00000512656 NBPF20Q3BBV1 942 aa8.9□□□□□ -0.98
USP46-208ENST00000512656 NBPF11Q86T75 865 aa8.9□□□□□ -0.98
USP46-208ENST00000512656 ZGPATQ8N5A5 531 aaKnown RBP8.9□□□□□ -0.98
USP46-208ENST00000512656 LRRFIP2Q9Y608 721 aaKnown RBP8.9□□□□□ -0.98
USP46-208ENST00000512656 SNCAIPQ9Y6H5 919 aa8.9□□□□□ -0.98
USP46-208ENST00000512656 KIAA0100Q14667 2235 aaKnown RBP8.9□□□□□ -0.98
USP46-208ENST00000512656 FAM181BA6NEQ2 426 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 CCER2I3L3R5 266 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 IPO8O15397 1037 aaKnown RBP8.89□□□□□ -0.99
USP46-208ENST00000512656 PPATQ06203 517 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 SPTY2D1Q68D10 685 aaPredicted RBP8.89□□□□□ -0.99
USP46-208ENST00000512656 CDC42EP5Q6NZY7 148 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 ADAM32Q8TC27 787 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 ARHGAP45Q92619 1136 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 ZKSCAN4Q969J2 545 aaPredicted RBP8.89□□□□□ -0.99
USP46-208ENST00000512656 ARMC5Q96C12 935 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 COPRSQ9NQ92 184 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 AKAP2Q9Y2D5 859 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 DAGLAQ9Y4D2 1042 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 LAMB1P07942 1786 aa8.89□□□□□ -0.99
USP46-208ENST00000512656 PDS5AQ29RF7 1337 aaKnown RBP8.88□□□□□ -0.99
USP46-208ENST00000512656 TLR2O60603 784 aa8.88□□□□□ -0.99
USP46-208ENST00000512656 GNRH1P01148 92 aa8.88□□□□□ -0.99
USP46-208ENST00000512656 PRDX5P30044 214 aa8.88□□□□□ -0.99
USP46-208ENST00000512656 PRMT2P55345 433 aa8.88□□□□□ -0.99
USP46-208ENST00000512656 TCP10Q12799 353 aa8.88□□□□□ -0.99
USP46-208ENST00000512656 SLC9C1Q4G0N8 1177 aa8.88□□□□□ -0.99
USP46-208ENST00000512656 INTS6LQ5JSJ4 861 aaKnown RBP8.88□□□□□ -0.99
USP46-208ENST00000512656 MIGA2Q7L4E1 593 aa8.88□□□□□ -0.99
USP46-208ENST00000512656 FAM43AQ8N2R8 423 aa8.88□□□□□ -0.99
USP46-208ENST00000512656 USP40Q9NVE5 1235 aa8.88□□□□□ -0.99
USP46-208ENST00000512656 CEP290O15078 2479 aa8.88□□□□□ -0.99
USP46-208ENST00000512656 OTOFQ9HC10 1997 aa8.87□□□□□ -0.99
USP46-208ENST00000512656 BTBD19C9JJ37 291 aa8.87□□□□□ -0.99
USP46-208ENST00000512656 ENTPD3O75355 529 aa8.87□□□□□ -0.99
USP46-208ENST00000512656 PHKA1P46020 1223 aa8.87□□□□□ -0.99
USP46-208ENST00000512656 RARSP54136 660 aaKnown RBP8.87□□□□□ -0.99
USP46-208ENST00000512656 MVPQ14764 893 aaKnown RBP8.87□□□□□ -0.99
USP46-208ENST00000512656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.87□□□□□ -0.99
USP46-208ENST00000512656 CCDC102BQ68D86 513 aa8.87□□□□□ -0.99
USP46-208ENST00000512656 ANKRD23Q86SG2 305 aa8.87□□□□□ -0.99
USP46-208ENST00000512656 DZIP1Q86YF9 867 aaKnown RBP8.87□□□□□ -0.99
USP46-208ENST00000512656 GCC1Q96CN9 775 aa8.87□□□□□ -0.99
USP46-208ENST00000512656 MEIS3Q99687 375 aa8.87□□□□□ -0.99
USP46-208ENST00000512656 HMX1Q9NP08 348 aaPredicted RBP8.87□□□□□ -0.99
USP46-208ENST00000512656 ZNF112Q9UJU3 913 aa8.87□□□□□ -0.99
USP46-208ENST00000512656 PA2G4Q9UQ80 394 aaKnown RBP8.87□□□□□ -0.99
USP46-208ENST00000512656 SOBPA7XYQ1 873 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 CXCL11O14625 94 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 SPINT1O43278 529 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 SRGAP3O43295 1099 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 HOXD10P28358 340 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 INPP5BP32019 993 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 LACTBP83111 547 aaPredicted RBP8.86□□□□□ -0.99
USP46-208ENST00000512656 NFIAQ12857 509 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 MTX1Q13505 466 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 NOL9Q5SY16 702 aaKnown RBP8.86□□□□□ -0.99
USP46-208ENST00000512656 GORABQ5T7V8 394 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 ZSCAN29Q8IWY8 852 aaPredicted RBP8.86□□□□□ -0.99
USP46-208ENST00000512656 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.86□□□□□ -0.99
USP46-208ENST00000512656 EPS8L1Q8TE68 723 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 ZNF333Q96JL9 665 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 IDI2Q9BXS1 227 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 ABCF2Q9UG63 623 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 KCNH4Q9UQ05 1017 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 CENPFP49454 3210 aa8.86□□□□□ -0.99
USP46-208ENST00000512656 GAKO14976 1311 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 A0A1B0GUL7 405 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 TTLL8A6PVC2 850 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 PDHXO00330 501 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 MAP4K4O95819 1239 aaPredicted RBP8.85□□□□□ -0.99
USP46-208ENST00000512656 GNAI2P04899 355 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 LDHCP07864 332 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 ADORA1P30542 326 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 RGS3P49796 1198 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 TIMM10P62072 90 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 GSTO1P78417 241 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms