RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 VCAM1P19320 739 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 TM4SF4P48230 202 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 USP14P54578 494 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 ANTXR2P58335 489 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 GPAT2Q6NUI2 795 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 PROCA1Q8NCQ7 364 aaPredicted RBP12.25□□□□□ -0.45
NR1I3-227ENST00000510951 TCEANC2Q96MN5 208 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 JAKMIP1Q96N16 626 aaKnown RBP12.25□□□□□ -0.45
NR1I3-227ENST00000510951 ZSCAN10Q96SZ4 725 aaPredicted RBP12.25□□□□□ -0.45
NR1I3-227ENST00000510951 VCPKMTQ9H867 229 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 TSKSQ9UJT2 592 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 ISY1Q9ULR0 285 aaKnown RBP12.25□□□□□ -0.45
NR1I3-227ENST00000510951 AGTPBP1Q9UPW5 1226 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 A0A0G2JMZ2 1700 aa12.25□□□□□ -0.45
NR1I3-227ENST00000510951 IFIT3O14879 490 aaKnown RBP12.24□□□□□ -0.45
NR1I3-227ENST00000510951 MGAMO43451 1857 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 EPB41L2O43491 1005 aaKnown RBP12.24□□□□□ -0.45
NR1I3-227ENST00000510951 PRC1O43663 620 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 CPA1P15085 419 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 INHBEP58166 350 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 MAP2K1Q02750 393 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-227ENST00000510951 KRT32Q14532 448 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 TAF1CQ15572 869 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-227ENST00000510951 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-227ENST00000510951 ANKRD23Q86SG2 305 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 REM2Q8IYK8 340 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-227ENST00000510951 ENAHQ8N8S7 591 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-227ENST00000510951 JMYQ8N9B5 988 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 KCNB2Q92953 911 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 C12orf42Q96LP6 360 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 NEK1Q96PY6 1258 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 NUP88Q99567 741 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-227ENST00000510951 TMEM47Q9BQJ4 181 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 BEGAINQ9BUH8 593 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 LRRC2Q9BYS8 371 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 TANGO6Q9C0B7 1094 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 RPAP3Q9H6T3 665 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-227ENST00000510951 TCP11L1Q9NUJ3 509 aa12.24□□□□□ -0.45
NR1I3-227ENST00000510951 CASP8AP2Q9UKL3 1982 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 ERICH2A1L162 156 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
NR1I3-227ENST00000510951 TRPA1O75762 1119 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 NDUFB10O96000 172 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 CYP2C8P10632 490 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 TOP1P11387 765 aaKnown RBP12.23□□□□□ -0.45
NR1I3-227ENST00000510951 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
NR1I3-227ENST00000510951 MCM5P33992 734 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 NT5C2P49902 561 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 TSGA10IPQ3SY00 556 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 TMEM67Q5HYA8 995 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 FAM83BQ5T0W9 1011 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 IFIT1BQ5T764 474 aaKnown RBP12.23□□□□□ -0.45
NR1I3-227ENST00000510951 OTUD7BQ6GQQ9 843 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 SENP2Q9HC62 589 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
NR1I3-227ENST00000510951 RNF186Q9NXI6 227 aa12.23□□□□□ -0.45
NR1I3-227ENST00000510951 F5H6K3 240 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 TBC1D8O95759 1140 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 HSPA1AP0DMV8 641 aaKnown RBP12.22□□□□□ -0.45
NR1I3-227ENST00000510951 HSPA1BP0DMV9 641 aaKnown RBP12.22□□□□□ -0.45
NR1I3-227ENST00000510951 NOVP48745 357 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 IRX3P78415 501 aaPredicted RBP12.22□□□□□ -0.45
NR1I3-227ENST00000510951 KLRC3Q07444 240 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 CRHR2Q13324 411 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 WTAPQ15007 396 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 SART3Q15020 963 aaKnown RBP12.22□□□□□ -0.45
NR1I3-227ENST00000510951 SEC23AQ15436 765 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 CCDC96Q2M329 555 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 CCDC178Q5BJE1 867 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 SLFN13Q68D06 897 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 BLOC1S2Q6QNY1 142 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 GMCL1P1Q8NEA9 526 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 LPAR1Q92633 364 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 PARK7Q99497 189 aaKnown RBP12.22□□□□□ -0.45
NR1I3-227ENST00000510951 ASCC2Q9H1I8 757 aaPredicted RBP12.22□□□□□ -0.45
NR1I3-227ENST00000510951 KAT14Q9H8E8 782 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
NR1I3-227ENST00000510951 FRMPD2Q68DX3 1309 aaPredicted RBP12.21□□□□□ -0.45
NR1I3-227ENST00000510951 BAZ2BQ9UIF8 2168 aaKnown RBP12.21□□□□□ -0.45
NR1I3-227ENST00000510951 SH2B2O14492 632 aaPredicted RBP12.21□□□□□ -0.45
NR1I3-227ENST00000510951 WDR46O15213 610 aaKnown RBP12.21□□□□□ -0.45
NR1I3-227ENST00000510951 ALDH1A1P00352 501 aa12.21□□□□□ -0.45
NR1I3-227ENST00000510951 OSBPP22059 807 aa12.21□□□□□ -0.45
NR1I3-227ENST00000510951 PABPC4Q13310 644 aaKnown RBP eCLIP12.21□□□□□ -0.45
NR1I3-227ENST00000510951 DGKHQ86XP1 1220 aa12.21□□□□□ -0.45
NR1I3-227ENST00000510951 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
NR1I3-227ENST00000510951 SMCR8Q8TEV9 937 aaPredicted RBP12.21□□□□□ -0.45
NR1I3-227ENST00000510951 MKL1Q969V6 931 aa12.21□□□□□ -0.45
NR1I3-227ENST00000510951 TTC14Q96N46 770 aa12.21□□□□□ -0.45
NR1I3-227ENST00000510951 UPF3BQ9BZI7 483 aaKnown RBP12.21□□□□□ -0.45
NR1I3-227ENST00000510951 R3HDMLQ9H3Y0 253 aa12.21□□□□□ -0.45
NR1I3-227ENST00000510951 PNMA3Q9UL41 463 aa12.21□□□□□ -0.45
NR1I3-227ENST00000510951 USP17L15C9J2P7 530 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 USP17L13C9JLJ4 530 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 USP17L11C9JVI0 530 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 USP17L18D6R9N7 530 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms