RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 ACER1Q8TDN7 264 aa6.1□□□□□ -1.43
HTT-206ENST00000509618 WDR18Q9BV38 432 aa6.1□□□□□ -1.43
HTT-206ENST00000509618 OSBPL5Q9H0X9 879 aaPredicted RBP6.1□□□□□ -1.43
HTT-206ENST00000509618 SMC4Q9NTJ3 1288 aa6.1□□□□□ -1.43
HTT-206ENST00000509618 TACC3Q9Y6A5 838 aa6.1□□□□□ -1.43
HTT-206ENST00000509618 ZNF236Q9UL36 1845 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 MROH7-TTC4A0A0A0MT08 1334 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 KIF16BQ96L93 1317 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 SALL1Q9NSC2 1324 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 SPDYE16A6NNV3 312 aaPredicted RBP6.09□□□□□ -1.43
HTT-206ENST00000509618 MSCO60682 206 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 LPXNO60711 386 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 ADAMTS4O75173 837 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 TIMP1P01033 207 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 CT47B1P0C2W7 299 aaPredicted RBP6.09□□□□□ -1.43
HTT-206ENST00000509618 PABPC4Q13310 644 aaKnown RBP eCLIP6.09□□□□□ -1.43
HTT-206ENST00000509618 KIAA1755Q5JYT7 1200 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 IER5LQ5T953 404 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 PPP2R2DQ66LE6 453 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 MFSD5Q6N075 450 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 HFE2Q6ZVN8 426 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 OTOP2Q7RTS6 562 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 ANKRD33Q7Z3H0 272 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 SLC44A5Q8NCS7 719 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 ARRDC4Q8NCT1 418 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 MOV10L1Q9BXT6 1211 aaKnown RBP6.09□□□□□ -1.43
HTT-206ENST00000509618 ALG13Q9NP73 1137 aaKnown RBP6.09□□□□□ -1.43
HTT-206ENST00000509618 XPNPEP3Q9NQH7 507 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 FAM86C1Q9NVL1 165 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 C9orf78Q9NZ63 289 aaPredicted RBP6.09□□□□□ -1.43
HTT-206ENST00000509618 ZBTB21Q9ULJ3 1066 aa6.09□□□□□ -1.43
HTT-206ENST00000509618 TRIOO75962 3097 aa6.09□□□□□ -1.44
HTT-206ENST00000509618 DCHS1Q96JQ0 3298 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 GVINP1Q7Z2Y8 2422 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 ZFHX4Q86UP3 3567 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 KRT37O76014 449 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 CA3P07451 260 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 IL9P15248 144 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 VCAM1P19320 739 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 MECOMQ03112 1051 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 OLFML2BQ68BL8 750 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 CCSAPQ6IQ19 270 aaPredicted RBP6.08□□□□□ -1.44
HTT-206ENST00000509618 TBC1D9Q6ZT07 1266 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 MRPL50Q8N5N7 158 aaKnown RBP6.08□□□□□ -1.44
HTT-206ENST00000509618 SH3RF3Q8TEJ3 882 aaPredicted RBP6.08□□□□□ -1.44
HTT-206ENST00000509618 SSH1Q8WYL5 1049 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 HERVK_113Q902F9 699 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 SRCIN1Q9C0H9 1055 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 WNT8AQ9H1J5 351 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 TMOD4Q9NZQ9 345 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 RABGAP1Q9Y3P9 1069 aa6.08□□□□□ -1.44
HTT-206ENST00000509618 KMT2BQ9UMN6 2715 aaPredicted RBP6.08□□□□□ -1.44
HTT-206ENST00000509618 PTPRCP08575 1304 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 SYNRGQ9UMZ2 1314 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 C5orf42Q9H799 3197 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 GPR75-ASB3A0A0A6YYF3 556 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 ALDH1L1O75891 902 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 GH2P01242 217 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 PGK2P07205 417 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 IFIT1P09914 478 aaKnown RBP6.07□□□□□ -1.44
HTT-206ENST00000509618 ZNF865P0CJ78 1059 aaPredicted RBP6.07□□□□□ -1.44
HTT-206ENST00000509618 SLC5A1P13866 664 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 ERCC3P19447 782 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 ACLYP53396 1101 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 GRB10Q13322 594 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 TTLL4Q14679 1199 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 RAB30Q15771 203 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 ALDH1L2Q3SY69 923 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 TMCO2Q7Z6W1 182 aaPredicted RBP6.07□□□□□ -1.44
HTT-206ENST00000509618 ADGRA1Q86SQ6 560 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 CCAR1Q8IX12 1150 aaKnown RBP6.07□□□□□ -1.44
HTT-206ENST00000509618 FAM126BQ8IXS8 530 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.07□□□□□ -1.44
HTT-206ENST00000509618 GDPD5Q8WTR4 605 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 MAML3Q96JK9 1138 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 SIL1Q9H173 461 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 SLC28A3Q9HAS3 691 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 CWC22Q9HCG8 908 aaKnown RBP6.07□□□□□ -1.44
HTT-206ENST00000509618 MSRAQ9UJ68 235 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 SMCHD1A6NHR9 2005 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 TECTAO75443 2155 aa6.07□□□□□ -1.44
HTT-206ENST00000509618 PTPRZ1P23471 2315 aaPredicted RBP6.07□□□□□ -1.44
HTT-206ENST00000509618 RIF1Q5UIP0 2472 aaKnown RBP6.06□□□□□ -1.44
HTT-206ENST00000509618 LCHNA4D1U4 455 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 USP17L10C9JJH3 530 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 EYA2O00167 538 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 APBB1O00213 710 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 CTAGE5O15320 804 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 ABCB7O75027 752 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 GUCY1A2P33402 732 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 CDK7P50613 346 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 CCL23P55773 120 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 TCF15Q12870 199 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 PPIGQ13427 754 aaKnown RBP eCLIP6.06□□□□□ -1.444e-8■□□□□ 10.3
HTT-206ENST00000509618 KCNA10Q16322 511 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 ATP2B3Q16720 1220 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 CCDC102BQ68D86 513 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 CATSPERGQ6ZRH7 1159 aa6.06□□□□□ -1.44
HTT-206ENST00000509618 DZIP1Q86YF9 867 aaKnown RBP6.06□□□□□ -1.44
HTT-206ENST00000509618 CLEC10AQ8IUN9 316 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms